EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000017199 (Gene tree)
Gene ID: 103044524
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 879-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 8791 bases
Position: chr7:8516492-8525282
Accession: 103044524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017707	zf-C2H2	PF00096.26	4e-36	1	4
ENSAMXP00000017707	zf-C2H2	PF00096.26	4e-36	2	4
ENSAMXP00000017707	zf-C2H2	PF00096.26	4e-36	3	4
ENSAMXP00000017707	zf-C2H2	PF00096.26	4e-36	4	4
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	1	6
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	2	6
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	3	6
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	4	6
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	5	6
ENSAMXP00000041102	zf-C2H2	PF00096.26	5.2e-31	6	6
ENSAMXP00000041102	zf-met	PF12874.7	0.00011	1	2
ENSAMXP00000041102	zf-met	PF12874.7	0.00011	2	2
ENSAMXP00000017707	zf-met	PF12874.7	0.00021	1	2
ENSAMXP00000017707	zf-met	PF12874.7	0.00021	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017707	-	3141	XM_015605602	ENSAMXP00000017707	854 (aa)	XP_015461088	W5LCZ5
ENSAMXT00000046023	-	2100	-	ENSAMXP00000041102	699 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000017199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000017199	-	50	46.857	ENSAMXG00000029178	-	96	40.303
ENSAMXG00000017199	-	58	45.390	ENSAMXG00000034096	-	87	45.390
ENSAMXG00000017199	-	99	39.412	ENSAMXG00000040198	-	98	33.856
ENSAMXG00000017199	-	50	39.203	ENSAMXG00000030659	-	83	40.367
ENSAMXG00000017199	-	51	43.000	ENSAMXG00000043178	-	71	42.268
ENSAMXG00000017199	-	50	37.714	ENSAMXG00000013274	-	92	46.040
ENSAMXG00000017199	-	50	39.545	ENSAMXG00000035246	-	72	39.545
ENSAMXG00000017199	-	52	46.479	ENSAMXG00000025452	-	97	46.479
ENSAMXG00000017199	-	50	40.764	ENSAMXG00000034934	-	87	40.764
ENSAMXG00000017199	-	50	45.455	ENSAMXG00000042174	-	92	43.320
ENSAMXG00000017199	-	52	43.182	ENSAMXG00000012873	-	92	43.103
ENSAMXG00000017199	-	50	43.277	ENSAMXG00000017959	-	97	45.175
ENSAMXG00000017199	-	51	33.533	ENSAMXG00000033299	-	70	34.656
ENSAMXG00000017199	-	57	41.313	ENSAMXG00000029783	-	94	39.502
ENSAMXG00000017199	-	54	40.588	ENSAMXG00000037631	-	65	40.588
ENSAMXG00000017199	-	50	37.952	ENSAMXG00000035437	-	99	42.991
ENSAMXG00000017199	-	58	44.138	ENSAMXG00000013492	-	99	38.554
ENSAMXG00000017199	-	50	41.000	ENSAMXG00000030742	-	98	43.452
ENSAMXG00000017199	-	50	46.154	ENSAMXG00000035690	-	75	46.154
ENSAMXG00000017199	-	51	44.253	ENSAMXG00000032619	-	97	44.253
ENSAMXG00000017199	-	51	41.475	ENSAMXG00000037143	-	96	41.475
ENSAMXG00000017199	-	50	45.133	ENSAMXG00000038905	-	90	43.805
ENSAMXG00000017199	-	71	34.756	ENSAMXG00000014745	-	82	42.541
ENSAMXG00000017199	-	52	38.462	ENSAMXG00000038235	snai2	70	38.462
ENSAMXG00000017199	-	50	38.750	ENSAMXG00000038507	-	76	38.202
ENSAMXG00000017199	-	50	38.636	ENSAMXG00000036915	-	92	38.636
ENSAMXG00000017199	-	51	44.388	ENSAMXG00000039770	-	84	41.472
ENSAMXG00000017199	-	50	46.193	ENSAMXG00000033013	-	85	46.193
ENSAMXG00000017199	-	51	45.217	ENSAMXG00000017609	-	81	45.217
ENSAMXG00000017199	-	50	50.000	ENSAMXG00000037923	-	99	50.000
ENSAMXG00000017199	-	51	45.455	ENSAMXG00000041725	-	95	45.455
ENSAMXG00000017199	-	51	32.836	ENSAMXG00000029518	-	54	37.079
ENSAMXG00000017199	-	51	45.029	ENSAMXG00000037717	-	94	45.029
ENSAMXG00000017199	-	50	45.783	ENSAMXG00000041721	-	67	45.783
ENSAMXG00000017199	-	52	38.024	ENSAMXG00000043423	-	82	36.286
ENSAMXG00000017199	-	53	42.731	ENSAMXG00000037981	-	78	42.731
ENSAMXG00000017199	-	54	38.298	ENSAMXG00000037760	-	100	38.298
ENSAMXG00000017199	-	52	40.181	ENSAMXG00000039752	-	90	40.181
ENSAMXG00000017199	-	50	33.143	ENSAMXG00000041864	prdm5	89	33.420
ENSAMXG00000017199	-	50	39.514	ENSAMXG00000041865	-	99	39.514
ENSAMXG00000017199	-	51	48.241	ENSAMXG00000036567	-	78	48.241
ENSAMXG00000017199	-	50	43.814	ENSAMXG00000039700	-	96	43.814
ENSAMXG00000017199	-	50	40.408	ENSAMXG00000010805	-	96	40.408
ENSAMXG00000017199	-	63	35.821	ENSAMXG00000042624	SCRT1	89	35.821
ENSAMXG00000017199	-	50	45.139	ENSAMXG00000042593	-	90	45.139
ENSAMXG00000017199	-	55	39.700	ENSAMXG00000040806	-	88	39.700
ENSAMXG00000017199	-	50	38.415	ENSAMXG00000040212	-	90	37.994
ENSAMXG00000017199	-	55	44.755	ENSAMXG00000033252	-	96	44.755
ENSAMXG00000017199	-	50	46.535	ENSAMXG00000034958	-	92	46.535
ENSAMXG00000017199	-	50	46.231	ENSAMXG00000036762	-	98	46.231
ENSAMXG00000017199	-	50	42.941	ENSAMXG00000042633	-	97	42.941
ENSAMXG00000017199	-	52	41.176	ENSAMXG00000039182	-	70	40.529
ENSAMXG00000017199	-	50	40.000	ENSAMXG00000035286	si:ch1073-224n8.1	85	36.638
ENSAMXG00000017199	-	50	39.053	ENSAMXG00000040677	-	90	42.478
ENSAMXG00000017199	-	50	42.373	ENSAMXG00000026143	-	95	42.373
ENSAMXG00000017199	-	53	48.734	ENSAMXG00000034333	-	98	48.421
ENSAMXG00000017199	-	51	38.926	ENSAMXG00000033201	-	95	38.824
ENSAMXG00000017199	-	50	38.971	ENSAMXG00000036849	-	85	36.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017199	-	51	39.024	ENSAPOG00000013511	-	55	39.024	Acanthochromis_polyacanthus
ENSAMXG00000017199	-	51	34.896	ENSAPOG00000004328	-	86	35.562	Acanthochromis_polyacanthus
ENSAMXG00000017199	-	52	36.465	ENSACIG00000010739	-	82	39.577	Amphilophus_citrinellus
ENSAMXG00000017199	-	53	34.844	ENSAOCG00000007045	-	90	38.261	Amphiprion_ocellaris
ENSAMXG00000017199	-	51	38.000	ENSAPEG00000016483	-	61	38.000	Amphiprion_percula
ENSAMXG00000017199	-	53	34.545	ENSCVAG00000011235	-	99	34.545	Cyprinodon_variegatus
ENSAMXG00000017199	-	50	37.050	ENSELUG00000013844	-	80	35.096	Esox_lucius
ENSAMXG00000017199	-	50	41.530	ENSELUG00000013357	-	84	41.530	Esox_lucius
ENSAMXG00000017199	-	53	38.095	ENSGAFG00000003150	-	90	43.103	Gambusia_affinis
ENSAMXG00000017199	-	50	38.484	ENSIPUG00000006916	-	86	38.484	Ictalurus_punctatus
ENSAMXG00000017199	-	50	44.545	ENSLOCG00000014144	-	99	44.545	Lepisosteus_oculatus
ENSAMXG00000017199	-	57	42.512	ENSMAMG00000019301	-	98	42.512	Mastacembelus_armatus
ENSAMXG00000017199	-	51	39.303	ENSMAMG00000016542	-	64	39.303	Mastacembelus_armatus
ENSAMXG00000017199	-	54	37.104	ENSMALG00000005554	-	95	37.104	Monopterus_albus
ENSAMXG00000017199	-	52	34.405	ENSPMGG00000017633	-	93	34.405	Periophthalmus_magnuspinnatus
ENSAMXG00000017199	-	50	34.115	ENSPFOG00000010682	-	95	34.451	Poecilia_formosa
ENSAMXG00000017199	-	53	33.957	ENSPLAG00000002892	-	77	33.957	Poecilia_latipinna
ENSAMXG00000017199	-	50	32.857	ENSPMEG00000001399	-	88	35.111	Poecilia_mexicana
ENSAMXG00000017199	-	50	34.375	ENSPREG00000001386	-	88	35.556	Poecilia_reticulata
ENSAMXG00000017199	-	54	46.939	ENSPNAG00000015116	-	78	46.939	Pygocentrus_nattereri
ENSAMXG00000017199	-	50	45.390	ENSSMAG00000009115	-	90	52.239	Scophthalmus_maximus
ENSAMXG00000017199	-	50	41.143	ENSSLDG00000020727	-	95	38.306	Seriola_lalandi_dorsalis
ENSAMXG00000017199	-	51	40.079	ENSSPAG00000021008	-	91	43.617	Stegastes_partitus
ENSAMXG00000017199	-	50	39.542	ENSXETG00000006575	znf420	82	39.583	Xenopus_tropicalis
ENSAMXG00000017199	-	50	38.235	ENSXCOG00000009665	-	88	41.053	Xiphophorus_couchianus
ENSAMXG00000017199	-	50	34.375	ENSXMAG00000028625	-	90	32.857	Xiphophorus_maculatus