EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000017271 (Gene tree)
Gene ID: 103028194
Gene Symbol: mbd4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8813 bases
Position: chr6:45536789-45545601
Accession: 103028194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017775	MBD	PF01429.19	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017775	-	2839	XM_007238282	ENSAMXP00000017775	406 (aa)	XP_007238344	W5LD63

Gene Model

Click here to download ENSAMXG00000017271's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017271's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017271	mbd4	68	62.443	ENSG00000129071	MBD4	93	57.895	Homo_sapiens
ENSAMXG00000017271	mbd4	92	46.813	ENSAPOG00000021668	mbd4	95	45.633	Acanthochromis_polyacanthus
ENSAMXG00000017271	mbd4	77	61.089	ENSAOCG00000001157	mbd4	95	46.035	Amphiprion_ocellaris
ENSAMXG00000017271	mbd4	77	61.479	ENSAPEG00000016131	mbd4	83	61.479	Amphiprion_percula
ENSAMXG00000017271	mbd4	92	45.614	ENSATEG00000014594	MBD4	86	45.614	Anabas_testudineus
ENSAMXG00000017271	mbd4	56	71.765	ENSCCAG00000029796	MBD4	52	71.765	Cebus_capucinus
ENSAMXG00000017271	mbd4	78	51.751	ENSEBUG00000010816	mbd4	70	51.751	Eptatretus_burgeri
ENSAMXG00000017271	mbd4	73	60.825	ENSEEUG00000011459	MBD4	54	60.825	Erinaceus_europaeus
ENSAMXG00000017271	mbd4	84	54.286	ENSGMOG00000013830	mbd4	66	54.286	Gadus_morhua
ENSAMXG00000017271	mbd4	73	64.831	ENSGAFG00000016011	mbd4	98	47.534	Gambusia_affinis
ENSAMXG00000017271	mbd4	79	40.336	ENSGACG00000001970	-	86	39.175	Gasterosteus_aculeatus
ENSAMXG00000017271	mbd4	77	57.634	ENSKMAG00000015015	mbd4	82	58.964	Kryptolebias_marmoratus
ENSAMXG00000017271	mbd4	92	44.518	ENSLBEG00000005669	MBD4	87	44.396	Labrus_bergylta
ENSAMXG00000017271	mbd4	80	60.268	ENSLOCG00000013054	MBD4	64	60.268	Lepisosteus_oculatus
ENSAMXG00000017271	mbd4	67	72.353	ENSMICG00000008022	MBD4	50	72.353	Microcebus_murinus
ENSAMXG00000017271	mbd4	70	59.649	ENSMODG00000006399	-	60	59.649	Monodelphis_domestica
ENSAMXG00000017271	mbd4	94	46.934	ENSMALG00000021517	mbd4	88	46.934	Monopterus_albus
ENSAMXG00000017271	mbd4	64	34.686	ENSMEUG00000015599	-	57	34.686	Notamacropus_eugenii
ENSAMXG00000017271	mbd4	81	60.526	ENSONIG00000017212	mbd4	100	48.741	Oreochromis_niloticus
ENSAMXG00000017271	mbd4	69	72.727	ENSORLG00000011049	mbd4	66	73.096	Oryzias_latipes
ENSAMXG00000017271	mbd4	69	72.727	ENSORLG00020020013	mbd4	66	73.096	Oryzias_latipes_hni
ENSAMXG00000017271	mbd4	69	72.727	ENSORLG00015015342	mbd4	66	73.096	Oryzias_latipes_hsok
ENSAMXG00000017271	mbd4	94	45.708	ENSOMEG00000008819	mbd4	92	45.708	Oryzias_melastigma
ENSAMXG00000017271	mbd4	68	58.407	ENSPANG00000015047	MBD4	50	58.407	Papio_anubis
ENSAMXG00000017271	mbd4	91	41.964	ENSPKIG00000012306	MBD4	75	41.964	Paramormyrops_kingsleyae
ENSAMXG00000017271	mbd4	81	63.115	ENSPFOG00000014471	mbd4	98	48.260	Poecilia_formosa
ENSAMXG00000017271	mbd4	93	65.672	ENSPNAG00000000509	mbd4	95	67.164	Pygocentrus_nattereri
ENSAMXG00000017271	mbd4	68	68.718	ENSSFOG00015016292	mbd4	59	68.718	Scleropages_formosus
ENSAMXG00000017271	mbd4	91	45.393	ENSSMAG00000013958	-	67	45.843	Scophthalmus_maximus
ENSAMXG00000017271	mbd4	75	64.609	ENSSDUG00000001365	mbd4	66	64.609	Seriola_dumerili
ENSAMXG00000017271	mbd4	69	59.677	ENSSLDG00000010295	MBD4	61	59.677	Seriola_lalandi_dorsalis
ENSAMXG00000017271	mbd4	68	73.099	ENSSSCG00000033303	MBD4	51	73.099	Sus_scrofa
ENSAMXG00000017271	mbd4	95	48.157	ENSTRUG00000010124	mbd4	97	48.157	Takifugu_rubripes
ENSAMXG00000017271	mbd4	91	45.516	ENSTNIG00000017927	mbd4	100	45.516	Tetraodon_nigroviridis
ENSAMXG00000017271	mbd4	92	43.590	ENSXETG00000026622	mbd4	90	43.590	Xenopus_tropicalis
ENSAMXG00000017271	mbd4	92	47.758	ENSXMAG00000021129	mbd4	98	47.982	Xiphophorus_maculatus