EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000017432 (Gene tree)
Gene ID: 103029611
Gene Symbol: atxn1b
Alias: atxn1|atxn1a
Full Name: ataxin-1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 15589 bases
Position: chr11:8684039-8699627
Accession: 103029611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000017970	AXH	PF08517.12	1.2e-41	1	1
ENSAMXP00000036655	AXH	PF08517.12	1.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000017970	-	3018	-	ENSAMXP00000017970	855 (aa)	-	W5LDQ8
ENSAMXT00000047573	-	3392	XM_022674280	ENSAMXP00000036655	855 (aa)	XP_022530001	UPI000BBD77FA

Gene Model

Click here to download ENSAMXG00000017432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017432	atxn1b	98	38.386	ENSAPOG00000018662	atxn1a	99	38.767	Acanthochromis_polyacanthus
ENSAMXG00000017432	atxn1b	98	40.929	ENSAPOG00000005003	atxn1b	98	41.520	Acanthochromis_polyacanthus
ENSAMXG00000017432	atxn1b	89	57.312	ENSACIG00000014661	atxn1b	98	48.640	Amphilophus_citrinellus
ENSAMXG00000017432	atxn1b	84	38.224	ENSACIG00000016088	atxn1a	99	36.281	Amphilophus_citrinellus
ENSAMXG00000017432	atxn1b	98	41.333	ENSAOCG00000019715	atxn1b	98	41.157	Amphiprion_ocellaris
ENSAMXG00000017432	atxn1b	98	37.814	ENSAOCG00000015796	atxn1a	99	38.827	Amphiprion_ocellaris
ENSAMXG00000017432	atxn1b	98	41.014	ENSAPEG00000022436	atxn1b	98	41.603	Amphiprion_percula
ENSAMXG00000017432	atxn1b	98	37.705	ENSAPEG00000011313	atxn1a	99	38.827	Amphiprion_percula
ENSAMXG00000017432	atxn1b	98	40.442	ENSATEG00000002982	atxn1b	98	41.048	Anabas_testudineus
ENSAMXG00000017432	atxn1b	98	38.190	ENSATEG00000013601	atxn1a	99	38.728	Anabas_testudineus
ENSAMXG00000017432	atxn1b	98	34.426	ENSACAG00000003919	ATXN1	99	34.641	Anolis_carolinensis
ENSAMXG00000017432	atxn1b	98	37.266	ENSACLG00000015429	atxn1a	99	38.020	Astatotilapia_calliptera
ENSAMXG00000017432	atxn1b	98	40.570	ENSACLG00000005697	atxn1b	98	40.476	Astatotilapia_calliptera
ENSAMXG00000017432	atxn1b	99	34.205	ENSBTAG00000019675	ATXN1	99	34.049	Bos_taurus
ENSAMXG00000017432	atxn1b	89	56.078	ENSCHIG00000018697	ATXN1	99	34.565	Capra_hircus
ENSAMXG00000017432	atxn1b	89	53.725	ENSCLAG00000002212	ATXN1	99	34.033	Chinchilla_lanigera
ENSAMXG00000017432	atxn1b	84	54.902	ENSCPBG00000022373	ATXN1	99	35.463	Chrysemys_picta_bellii
ENSAMXG00000017432	atxn1b	98	33.040	ENSCGRG00001022108	Atxn1	99	34.341	Cricetulus_griseus_chok1gshd
ENSAMXG00000017432	atxn1b	98	33.333	ENSCGRG00000014084	Atxn1	99	34.641	Cricetulus_griseus_crigri
ENSAMXG00000017432	atxn1b	98	39.306	ENSCSEG00000004666	atxn1b	98	40.154	Cynoglossus_semilaevis
ENSAMXG00000017432	atxn1b	98	41.667	ENSCVAG00000010945	atxn1b	98	41.939	Cyprinodon_variegatus
ENSAMXG00000017432	atxn1b	98	36.983	ENSCVAG00000023240	atxn1a	99	36.983	Cyprinodon_variegatus
ENSAMXG00000017432	atxn1b	98	39.238	ENSDARG00000061687	atxn1a	99	40.247	Danio_rerio
ENSAMXG00000017432	atxn1b	98	59.375	ENSDARG00000060862	atxn1b	99	59.324	Danio_rerio
ENSAMXG00000017432	atxn1b	58	40.198	ENSDNOG00000048471	ATXN1	67	41.980	Dasypus_novemcinctus
ENSAMXG00000017432	atxn1b	98	33.848	ENSDORG00000005940	Atxn1	99	34.628	Dipodomys_ordii
ENSAMXG00000017432	atxn1b	76	45.763	ENSETEG00000003815	ATXN1	83	47.568	Echinops_telfairi
ENSAMXG00000017432	atxn1b	89	56.078	ENSEASG00005011799	ATXN1	99	35.738	Equus_asinus_asinus
ENSAMXG00000017432	atxn1b	89	56.078	ENSECAG00000009251	ATXN1	99	35.738	Equus_caballus
ENSAMXG00000017432	atxn1b	89	54.902	ENSEEUG00000007120	ATXN1	99	35.076	Erinaceus_europaeus
ENSAMXG00000017432	atxn1b	99	37.701	ENSELUG00000003691	atxn1a	97	39.701	Esox_lucius
ENSAMXG00000017432	atxn1b	91	54.717	ENSELUG00000001311	atxn1b	73	54.717	Esox_lucius
ENSAMXG00000017432	atxn1b	89	55.294	ENSFCAG00000011298	ATXN1	99	34.487	Felis_catus
ENSAMXG00000017432	atxn1b	98	36.536	ENSFALG00000013400	ATXN1	99	36.384	Ficedula_albicollis
ENSAMXG00000017432	atxn1b	73	54.054	ENSFDAG00000020905	ATXN1	90	42.581	Fukomys_damarensis
ENSAMXG00000017432	atxn1b	98	41.261	ENSFHEG00000017226	atxn1b	98	41.261	Fundulus_heteroclitus
ENSAMXG00000017432	atxn1b	98	36.284	ENSFHEG00000019419	atxn1a	99	35.974	Fundulus_heteroclitus
ENSAMXG00000017432	atxn1b	98	38.757	ENSGMOG00000013508	atxn1b	99	37.640	Gadus_morhua
ENSAMXG00000017432	atxn1b	98	36.282	ENSGALG00000012709	ATXN1	99	35.255	Gallus_gallus
ENSAMXG00000017432	atxn1b	85	37.129	ENSGAFG00000010544	atxn1a	99	35.991	Gambusia_affinis
ENSAMXG00000017432	atxn1b	69	54.582	ENSGAFG00000007295	atxn1b	98	40.552	Gambusia_affinis
ENSAMXG00000017432	atxn1b	91	54.789	ENSGACG00000008747	atxn1b	99	55.000	Gasterosteus_aculeatus
ENSAMXG00000017432	atxn1b	98	35.731	ENSGACG00000003472	atxn1a	99	35.829	Gasterosteus_aculeatus
ENSAMXG00000017432	atxn1b	84	54.902	ENSGAGG00000006868	ATXN1	99	36.013	Gopherus_agassizii
ENSAMXG00000017432	atxn1b	98	37.528	ENSHBUG00000002508	atxn1a	99	38.063	Haplochromis_burtoni
ENSAMXG00000017432	atxn1b	98	40.461	ENSHBUG00000016081	atxn1b	98	40.476	Haplochromis_burtoni
ENSAMXG00000017432	atxn1b	87	54.785	ENSHCOG00000014835	atxn1b	99	42.290	Hippocampus_comes
ENSAMXG00000017432	atxn1b	89	37.184	ENSHCOG00000019032	atxn1a	99	34.096	Hippocampus_comes
ENSAMXG00000017432	atxn1b	98	38.870	ENSIPUG00000001402	atxn1	99	37.877	Ictalurus_punctatus
ENSAMXG00000017432	atxn1b	98	75.326	ENSIPUG00000002088	atxn1b	99	74.496	Ictalurus_punctatus
ENSAMXG00000017432	atxn1b	98	33.406	ENSJJAG00000000377	Atxn1	99	35.442	Jaculus_jaculus
ENSAMXG00000017432	atxn1b	98	39.802	ENSKMAG00000013507	atxn1b	99	40.022	Kryptolebias_marmoratus
ENSAMXG00000017432	atxn1b	98	35.275	ENSKMAG00000007216	atxn1a	99	36.475	Kryptolebias_marmoratus
ENSAMXG00000017432	atxn1b	98	40.899	ENSLBEG00000024264	atxn1b	98	41.277	Labrus_bergylta
ENSAMXG00000017432	atxn1b	85	39.012	ENSLBEG00000024388	atxn1a	99	37.877	Labrus_bergylta
ENSAMXG00000017432	atxn1b	98	36.842	ENSLACG00000005371	ATXN1	99	36.760	Latimeria_chalumnae
ENSAMXG00000017432	atxn1b	98	42.599	ENSLOCG00000002910	atxn1a	99	43.100	Lepisosteus_oculatus
ENSAMXG00000017432	atxn1b	98	35.459	ENSLAFG00000015231	ATXN1	99	35.714	Loxodonta_africana
ENSAMXG00000017432	atxn1b	98	42.002	ENSMAMG00000011503	atxn1b	98	42.174	Mastacembelus_armatus
ENSAMXG00000017432	atxn1b	98	36.848	ENSMAMG00000014004	atxn1a	99	37.882	Mastacembelus_armatus
ENSAMXG00000017432	atxn1b	98	37.266	ENSMZEG00005003602	atxn1a	99	38.020	Maylandia_zebra
ENSAMXG00000017432	atxn1b	98	40.570	ENSMZEG00005015064	atxn1b	98	40.476	Maylandia_zebra
ENSAMXG00000017432	atxn1b	98	35.386	ENSMGAG00000003028	ATXN1	99	34.444	Meleagris_gallopavo
ENSAMXG00000017432	atxn1b	98	34.547	ENSMICG00000011875	ATXN1	99	35.534	Microcebus_murinus
ENSAMXG00000017432	atxn1b	98	33.518	ENSMOCG00000001527	Atxn1	99	35.452	Microtus_ochrogaster
ENSAMXG00000017432	atxn1b	98	42.445	ENSMMOG00000002884	atxn1b	98	55.426	Mola_mola
ENSAMXG00000017432	atxn1b	98	37.584	ENSMMOG00000018593	atxn1a	99	38.514	Mola_mola
ENSAMXG00000017432	atxn1b	98	35.487	ENSMODG00000010827	ATXN1	99	35.487	Monodelphis_domestica
ENSAMXG00000017432	atxn1b	98	40.552	ENSMALG00000012137	atxn1b	99	41.028	Monopterus_albus
ENSAMXG00000017432	atxn1b	84	38.660	ENSMALG00000005209	atxn1a	99	38.826	Monopterus_albus
ENSAMXG00000017432	atxn1b	98	34.490	MGP_CAROLIEiJ_G0018479	Atxn1	99	34.594	Mus_caroli
ENSAMXG00000017432	atxn1b	98	34.490	ENSMUSG00000046876	Atxn1	99	34.594	Mus_musculus
ENSAMXG00000017432	atxn1b	98	35.603	MGP_PahariEiJ_G0019546	Atxn1	99	35.477	Mus_pahari
ENSAMXG00000017432	atxn1b	98	34.602	MGP_SPRETEiJ_G0019357	Atxn1	99	34.705	Mus_spretus
ENSAMXG00000017432	atxn1b	98	35.011	ENSMLUG00000000896	ATXN1	99	34.561	Myotis_lucifugus
ENSAMXG00000017432	atxn1b	98	37.582	ENSNBRG00000013216	atxn1a	99	38.004	Neolamprologus_brichardi
ENSAMXG00000017432	atxn1b	98	40.369	ENSNBRG00000014776	atxn1b	98	40.161	Neolamprologus_brichardi
ENSAMXG00000017432	atxn1b	98	34.071	ENSMEUG00000014680	ATXN1	96	34.071	Notamacropus_eugenii
ENSAMXG00000017432	atxn1b	89	53.030	ENSODEG00000006297	ATXN1	99	34.054	Octodon_degus
ENSAMXG00000017432	atxn1b	88	58.964	ENSONIG00000003094	atxn1b	99	41.638	Oreochromis_niloticus
ENSAMXG00000017432	atxn1b	98	40.437	ENSORLG00000008288	atxn1b	98	40.393	Oryzias_latipes
ENSAMXG00000017432	atxn1b	98	37.683	ENSORLG00000013003	atxn1a	99	37.683	Oryzias_latipes
ENSAMXG00000017432	atxn1b	98	40.984	ENSORLG00020013514	atxn1b	98	40.939	Oryzias_latipes_hni
ENSAMXG00000017432	atxn1b	98	36.712	ENSORLG00020006722	atxn1a	99	36.599	Oryzias_latipes_hni
ENSAMXG00000017432	atxn1b	98	40.022	ENSORLG00015019876	atxn1b	98	39.760	Oryzias_latipes_hsok
ENSAMXG00000017432	atxn1b	98	36.771	ENSORLG00015014668	atxn1a	99	37.108	Oryzias_latipes_hsok
ENSAMXG00000017432	atxn1b	98	42.134	ENSOMEG00000003259	atxn1b	98	41.950	Oryzias_melastigma
ENSAMXG00000017432	atxn1b	98	35.851	ENSOMEG00000012883	atxn1a	98	37.162	Oryzias_melastigma
ENSAMXG00000017432	atxn1b	56	57.778	ENSOARG00000012141	ATXN1	78	57.778	Ovis_aries
ENSAMXG00000017432	atxn1b	89	55.294	ENSPPRG00000004547	ATXN1	90	36.508	Panthera_pardus
ENSAMXG00000017432	atxn1b	98	40.888	ENSPKIG00000018323	atxn1b	99	41.043	Paramormyrops_kingsleyae
ENSAMXG00000017432	atxn1b	84	50.365	ENSPKIG00000003054	atxn1a	99	38.870	Paramormyrops_kingsleyae
ENSAMXG00000017432	atxn1b	77	30.864	ENSPSIG00000007158	ATXN1	92	31.557	Pelodiscus_sinensis
ENSAMXG00000017432	atxn1b	61	58.203	ENSPMGG00000022926	atxn1a	72	38.746	Periophthalmus_magnuspinnatus
ENSAMXG00000017432	atxn1b	88	54.918	ENSPMGG00000013610	atxn1b	99	38.426	Periophthalmus_magnuspinnatus
ENSAMXG00000017432	atxn1b	99	35.132	ENSPCIG00000019413	ATXN1	92	51.852	Phascolarctos_cinereus
ENSAMXG00000017432	atxn1b	85	37.404	ENSPFOG00000014422	atxn1a	99	35.778	Poecilia_formosa
ENSAMXG00000017432	atxn1b	89	54.365	ENSPLAG00000018703	atxn1b	98	40.949	Poecilia_latipinna
ENSAMXG00000017432	atxn1b	85	36.182	ENSPLAG00000018978	atxn1a	99	35.017	Poecilia_latipinna
ENSAMXG00000017432	atxn1b	85	37.018	ENSPMEG00000002647	atxn1a	99	35.556	Poecilia_mexicana
ENSAMXG00000017432	atxn1b	59	36.535	ENSPREG00000020308	atxn1b	98	41.235	Poecilia_reticulata
ENSAMXG00000017432	atxn1b	85	37.628	ENSPREG00000008333	atxn1a	99	36.182	Poecilia_reticulata
ENSAMXG00000017432	atxn1b	63	57.447	ENSPCAG00000008196	ATXN1	58	49.799	Procavia_capensis
ENSAMXG00000017432	atxn1b	98	34.879	ENSPCOG00000013612	ATXN1	99	35.754	Propithecus_coquereli
ENSAMXG00000017432	atxn1b	98	37.596	ENSPNYG00000011920	atxn1a	99	38.133	Pundamilia_nyererei
ENSAMXG00000017432	atxn1b	98	40.600	ENSPNYG00000017095	atxn1b	98	40.276	Pundamilia_nyererei
ENSAMXG00000017432	atxn1b	98	84.679	ENSPNAG00000001226	atxn1b	99	84.679	Pygocentrus_nattereri
ENSAMXG00000017432	atxn1b	98	35.162	ENSRNOG00000016998	Atxn1	99	35.150	Rattus_norvegicus
ENSAMXG00000017432	atxn1b	98	38.702	ENSSFOG00015005189	atxn1	99	39.607	Scleropages_formosus
ENSAMXG00000017432	atxn1b	98	43.729	ENSSFOG00015000179	atxn1b	99	43.919	Scleropages_formosus
ENSAMXG00000017432	atxn1b	97	36.737	ENSSMAG00000007731	atxn1a	94	37.292	Scophthalmus_maximus
ENSAMXG00000017432	atxn1b	98	40.285	ENSSMAG00000019621	atxn1b	98	41.145	Scophthalmus_maximus
ENSAMXG00000017432	atxn1b	98	38.595	ENSSDUG00000011376	atxn1a	99	39.448	Seriola_dumerili
ENSAMXG00000017432	atxn1b	98	38.486	ENSSLDG00000013505	atxn1a	99	39.667	Seriola_lalandi_dorsalis
ENSAMXG00000017432	atxn1b	98	35.301	ENSSPUG00000016650	ATXN1	99	34.731	Sphenodon_punctatus
ENSAMXG00000017432	atxn1b	98	37.773	ENSSPAG00000019849	atxn1a	99	38.453	Stegastes_partitus
ENSAMXG00000017432	atxn1b	89	58.824	ENSSPAG00000003388	atxn1b	98	42.435	Stegastes_partitus
ENSAMXG00000017432	atxn1b	89	56.299	ENSSSCG00000001065	ATXN1	99	35.745	Sus_scrofa
ENSAMXG00000017432	atxn1b	98	34.340	ENSTGUG00000005986	ATXN1	99	34.452	Taeniopygia_guttata
ENSAMXG00000017432	atxn1b	85	56.654	ENSTRUG00000014645	atxn1a	99	37.458	Takifugu_rubripes
ENSAMXG00000017432	atxn1b	98	40.586	ENSTRUG00000024789	atxn1b	99	40.513	Takifugu_rubripes
ENSAMXG00000017432	atxn1b	70	40.589	ENSTNIG00000005089	atxn1a	99	36.994	Tetraodon_nigroviridis
ENSAMXG00000017432	atxn1b	98	41.251	ENSTNIG00000018398	atxn1b	99	40.440	Tetraodon_nigroviridis
ENSAMXG00000017432	atxn1b	90	55.344	ENSTTRG00000014678	ATXN1	97	34.661	Tursiops_truncatus
ENSAMXG00000017432	atxn1b	98	35.006	ENSXETG00000014184	atxn1	99	34.972	Xenopus_tropicalis
ENSAMXG00000017432	atxn1b	85	37.500	ENSXCOG00000020061	atxn1a	99	35.868	Xiphophorus_couchianus
ENSAMXG00000017432	atxn1b	98	39.701	ENSXCOG00000019714	atxn1b	98	40.345	Xiphophorus_couchianus
ENSAMXG00000017432	atxn1b	85	37.009	ENSXMAG00000003615	atxn1a	99	35.595	Xiphophorus_maculatus
ENSAMXG00000017432	atxn1b	69	54.762	ENSXMAG00000014270	atxn1b	98	54.231	Xiphophorus_maculatus