EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000017568 (Gene tree)
Gene ID: 103027745
Gene Symbol: tsen34
Alias: si:ch211-203b8.3
Full Name: tRNA splicing endonuclease subunit 34
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4519 bases
Position: chr18:22886233-22890751
Accession: 103027745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018082	tRNA_int_endo	PF01974.17	5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018082	-	1334	XM_007235623	ENSAMXP00000018082	317 (aa)	XP_007235685	W5LE20

Gene Model

Click here to download ENSAMXG00000017568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017568's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017568	tsen34	86	39.355	ENSG00000170892	TSEN34	99	39.355	Homo_sapiens
ENSAMXG00000017568	tsen34	87	53.571	ENSAPOG00000001248	tsen34	94	55.357	Acanthochromis_polyacanthus
ENSAMXG00000017568	tsen34	81	54.440	ENSAPOG00000012557	-	87	56.371	Acanthochromis_polyacanthus
ENSAMXG00000017568	tsen34	86	48.929	ENSAPOG00000008579	-	94	55.385	Acanthochromis_polyacanthus
ENSAMXG00000017568	tsen34	79	38.596	ENSAMEG00000004585	TSEN34	100	38.596	Ailuropoda_melanoleuca
ENSAMXG00000017568	tsen34	91	51.864	ENSACIG00000007110	tsen34	88	53.571	Amphilophus_citrinellus
ENSAMXG00000017568	tsen34	87	54.643	ENSAOCG00000006905	tsen34	94	54.643	Amphiprion_ocellaris
ENSAMXG00000017568	tsen34	87	54.643	ENSAPEG00000019171	tsen34	94	54.643	Amphiprion_percula
ENSAMXG00000017568	tsen34	88	53.357	ENSATEG00000019800	tsen34	96	53.357	Anabas_testudineus
ENSAMXG00000017568	tsen34	87	40.968	ENSACAG00000016189	TSEN34	99	41.935	Anolis_carolinensis
ENSAMXG00000017568	tsen34	86	39.032	ENSANAG00000026113	TSEN34	99	39.032	Aotus_nancymaae
ENSAMXG00000017568	tsen34	91	54.007	ENSACLG00000009661	tsen34	93	56.272	Astatotilapia_calliptera
ENSAMXG00000017568	tsen34	86	37.942	ENSBTAG00000006486	TSEN34	99	37.942	Bos_taurus
ENSAMXG00000017568	tsen34	86	39.731	ENSCJAG00000001128	TSEN34	99	39.527	Callithrix_jacchus
ENSAMXG00000017568	tsen34	86	37.500	ENSCAFG00000002675	TSEN34	99	38.462	Canis_familiaris
ENSAMXG00000017568	tsen34	86	37.419	ENSCAFG00020018350	TSEN34	99	38.710	Canis_lupus_dingo
ENSAMXG00000017568	tsen34	86	38.361	ENSCHIG00000020705	TSEN34	99	38.361	Capra_hircus
ENSAMXG00000017568	tsen34	82	37.294	ENSTSYG00000028200	TSEN34	95	37.288	Carlito_syrichta
ENSAMXG00000017568	tsen34	86	39.000	ENSCPOG00000012672	TSEN34	99	39.667	Cavia_porcellus
ENSAMXG00000017568	tsen34	86	39.262	ENSCCAG00000036023	TSEN34	99	39.262	Cebus_capucinus
ENSAMXG00000017568	tsen34	85	36.721	ENSCATG00000033390	TSEN34	96	36.721	Cercocebus_atys
ENSAMXG00000017568	tsen34	86	38.614	ENSCLAG00000000618	TSEN34	99	38.614	Chinchilla_lanigera
ENSAMXG00000017568	tsen34	86	39.677	ENSCSAG00000001891	TSEN34	99	39.677	Chlorocebus_sabaeus
ENSAMXG00000017568	tsen34	86	38.065	ENSCANG00000040984	TSEN34	99	38.065	Colobus_angolensis_palliatus
ENSAMXG00000017568	tsen34	86	39.048	ENSCGRG00001006296	Tsen34	99	39.048	Cricetulus_griseus_chok1gshd
ENSAMXG00000017568	tsen34	91	55.517	ENSCSEG00000006278	tsen34	90	56.989	Cynoglossus_semilaevis
ENSAMXG00000017568	tsen34	91	62.245	ENSDARG00000061370	tsen34	89	65.125	Danio_rerio
ENSAMXG00000017568	tsen34	86	36.452	ENSDNOG00000039332	TSEN34	99	36.129	Dasypus_novemcinctus
ENSAMXG00000017568	tsen34	86	38.689	ENSDORG00000029071	Tsen34	99	38.689	Dipodomys_ordii
ENSAMXG00000017568	tsen34	86	37.742	ENSEASG00005021580	TSEN34	99	37.742	Equus_asinus_asinus
ENSAMXG00000017568	tsen34	86	37.097	ENSECAG00000019651	TSEN34	85	37.097	Equus_caballus
ENSAMXG00000017568	tsen34	62	34.259	ENSEEUG00000005692	TSEN34	75	34.259	Erinaceus_europaeus
ENSAMXG00000017568	tsen34	87	61.429	ENSELUG00000006262	tsen34	91	61.429	Esox_lucius
ENSAMXG00000017568	tsen34	86	39.032	ENSFCAG00000014045	TSEN34	99	39.032	Felis_catus
ENSAMXG00000017568	tsen34	91	54.452	ENSFHEG00000008791	tsen34	95	54.861	Fundulus_heteroclitus
ENSAMXG00000017568	tsen34	65	54.369	ENSGMOG00000001961	tsen34	99	54.369	Gadus_morhua
ENSAMXG00000017568	tsen34	92	55.631	ENSGAFG00000016880	tsen34	94	57.348	Gambusia_affinis
ENSAMXG00000017568	tsen34	87	49.333	ENSGACG00000004800	tsen34	99	51.178	Gasterosteus_aculeatus
ENSAMXG00000017568	tsen34	88	44.637	ENSGAGG00000008982	TSEN34	73	44.983	Gopherus_agassizii
ENSAMXG00000017568	tsen34	86	39.355	ENSGGOG00000008197	TSEN34	99	39.355	Gorilla_gorilla
ENSAMXG00000017568	tsen34	91	55.052	ENSHBUG00000016593	tsen34	84	55.914	Haplochromis_burtoni
ENSAMXG00000017568	tsen34	86	39.216	ENSHGLG00000017619	TSEN34	99	39.216	Heterocephalus_glaber_female
ENSAMXG00000017568	tsen34	92	48.630	ENSHCOG00000001368	tsen34	96	49.819	Hippocampus_comes
ENSAMXG00000017568	tsen34	94	70.820	ENSIPUG00000008359	tsen34	91	72.945	Ictalurus_punctatus
ENSAMXG00000017568	tsen34	86	40.000	ENSSTOG00000023816	TSEN34	99	40.000	Ictidomys_tridecemlineatus
ENSAMXG00000017568	tsen34	86	39.172	ENSJJAG00000016301	Tsen34	99	39.172	Jaculus_jaculus
ENSAMXG00000017568	tsen34	87	55.556	ENSKMAG00000007181	tsen34	86	55.556	Kryptolebias_marmoratus
ENSAMXG00000017568	tsen34	87	59.431	ENSLBEG00000015001	tsen34	95	59.431	Labrus_bergylta
ENSAMXG00000017568	tsen34	87	63.406	ENSLOCG00000001887	tsen34	97	63.406	Lepisosteus_oculatus
ENSAMXG00000017568	tsen34	86	37.658	ENSLAFG00000015215	TSEN34	99	38.050	Loxodonta_africana
ENSAMXG00000017568	tsen34	86	38.710	ENSMFAG00000044825	TSEN34	99	38.710	Macaca_fascicularis
ENSAMXG00000017568	tsen34	86	38.710	ENSMMUG00000016571	TSEN34	99	38.710	Macaca_mulatta
ENSAMXG00000017568	tsen34	86	38.710	ENSMNEG00000045457	TSEN34	99	38.710	Macaca_nemestrina
ENSAMXG00000017568	tsen34	60	36.726	ENSMLEG00000034295	TSEN34	96	35.507	Mandrillus_leucophaeus
ENSAMXG00000017568	tsen34	91	56.897	ENSMAMG00000018407	tsen34	98	57.544	Mastacembelus_armatus
ENSAMXG00000017568	tsen34	91	55.052	ENSMZEG00005002313	tsen34	93	55.914	Maylandia_zebra
ENSAMXG00000017568	tsen34	67	35.060	ENSMAUG00000019716	Tsen34	80	35.060	Mesocricetus_auratus
ENSAMXG00000017568	tsen34	86	39.677	ENSMICG00000002409	TSEN34	99	39.677	Microcebus_murinus
ENSAMXG00000017568	tsen34	86	37.736	ENSMOCG00000022190	Tsen34	99	38.365	Microtus_ochrogaster
ENSAMXG00000017568	tsen34	87	53.642	ENSMMOG00000009551	tsen34	92	58.103	Mola_mola
ENSAMXG00000017568	tsen34	88	40.385	ENSMODG00000003984	-	76	42.071	Monodelphis_domestica
ENSAMXG00000017568	tsen34	90	53.659	ENSMALG00000018918	tsen34	98	54.704	Monopterus_albus
ENSAMXG00000017568	tsen34	86	39.228	MGP_CAROLIEiJ_G0029099	Tsen34	99	39.228	Mus_caroli
ENSAMXG00000017568	tsen34	86	39.103	ENSMUSG00000035585	Tsen34	98	49.533	Mus_musculus
ENSAMXG00000017568	tsen34	86	38.339	MGP_PahariEiJ_G0020968	Tsen34	99	38.339	Mus_pahari
ENSAMXG00000017568	tsen34	86	39.103	MGP_SPRETEiJ_G0030152	Tsen34	99	39.103	Mus_spretus
ENSAMXG00000017568	tsen34	86	37.742	ENSMPUG00000010373	TSEN34	99	37.097	Mustela_putorius_furo
ENSAMXG00000017568	tsen34	86	39.228	ENSMLUG00000016894	TSEN34	99	39.228	Myotis_lucifugus
ENSAMXG00000017568	tsen34	73	34.944	ENSNGAG00000016187	Tsen34	99	34.944	Nannospalax_galili
ENSAMXG00000017568	tsen34	90	53.659	ENSNBRG00000008640	tsen34	98	54.710	Neolamprologus_brichardi
ENSAMXG00000017568	tsen34	86	39.145	ENSNLEG00000006309	TSEN34	99	39.474	Nomascus_leucogenys
ENSAMXG00000017568	tsen34	85	45.221	ENSMEUG00000002978	TSEN34	98	45.221	Notamacropus_eugenii
ENSAMXG00000017568	tsen34	86	37.500	ENSODEG00000000096	TSEN34	99	37.898	Octodon_degus
ENSAMXG00000017568	tsen34	88	55.556	ENSONIG00000017253	tsen34	100	55.556	Oreochromis_niloticus
ENSAMXG00000017568	tsen34	62	39.556	ENSOANG00000014747	-	97	40.889	Ornithorhynchus_anatinus
ENSAMXG00000017568	tsen34	88	53.405	ENSORLG00015012740	tsen34	95	54.480	Oryzias_latipes_hsok
ENSAMXG00000017568	tsen34	88	53.214	ENSOMEG00000016771	tsen34	94	54.122	Oryzias_melastigma
ENSAMXG00000017568	tsen34	86	39.032	ENSOGAG00000006966	TSEN34	99	39.032	Otolemur_garnettii
ENSAMXG00000017568	tsen34	70	36.293	ENSOARG00000002763	TSEN34	92	36.823	Ovis_aries
ENSAMXG00000017568	tsen34	86	39.032	ENSPPAG00000036935	TSEN34	99	39.032	Pan_paniscus
ENSAMXG00000017568	tsen34	86	39.032	ENSPPRG00000011779	TSEN34	99	39.032	Panthera_pardus
ENSAMXG00000017568	tsen34	86	39.355	ENSPTRG00000011448	TSEN34	99	39.355	Pan_troglodytes
ENSAMXG00000017568	tsen34	86	39.355	ENSPTRG00000044768	-	99	39.355	Pan_troglodytes
ENSAMXG00000017568	tsen34	86	38.710	ENSPANG00000012101	TSEN34	99	38.710	Papio_anubis
ENSAMXG00000017568	tsen34	87	61.786	ENSPKIG00000014674	tsen34	93	61.786	Paramormyrops_kingsleyae
ENSAMXG00000017568	tsen34	86	39.550	ENSPEMG00000014535	Tsen34	99	39.550	Peromyscus_maniculatus_bairdii
ENSAMXG00000017568	tsen34	92	56.655	ENSPFOG00000008679	tsen34	97	57.692	Poecilia_formosa
ENSAMXG00000017568	tsen34	92	56.314	ENSPLAG00000017309	tsen34	97	57.343	Poecilia_latipinna
ENSAMXG00000017568	tsen34	92	56.655	ENSPMEG00000005235	tsen34	97	57.692	Poecilia_mexicana
ENSAMXG00000017568	tsen34	90	58.537	ENSPREG00000021784	tsen34	96	58.537	Poecilia_reticulata
ENSAMXG00000017568	tsen34	86	39.355	ENSPPYG00000010376	TSEN34	94	39.355	Pongo_abelii
ENSAMXG00000017568	tsen34	86	37.742	ENSPCAG00000012359	TSEN34	99	37.097	Procavia_capensis
ENSAMXG00000017568	tsen34	86	38.387	ENSPCOG00000013843	TSEN34	99	38.710	Propithecus_coquereli
ENSAMXG00000017568	tsen34	86	40.196	ENSPVAG00000015570	TSEN34	99	38.235	Pteropus_vampyrus
ENSAMXG00000017568	tsen34	91	55.401	ENSPNYG00000024090	tsen34	73	56.272	Pundamilia_nyererei
ENSAMXG00000017568	tsen34	100	75.309	ENSPNAG00000028698	tsen34	90	80.000	Pygocentrus_nattereri
ENSAMXG00000017568	tsen34	86	39.103	ENSRNOG00000055179	Tsen34	99	39.103	Rattus_norvegicus
ENSAMXG00000017568	tsen34	86	39.103	ENSRNOG00000059572	Tsen34l1	99	39.103	Rattus_norvegicus
ENSAMXG00000017568	tsen34	86	38.387	ENSRBIG00000034430	TSEN34	99	38.387	Rhinopithecus_bieti
ENSAMXG00000017568	tsen34	86	38.387	ENSRROG00000024217	TSEN34	99	38.387	Rhinopithecus_roxellana
ENSAMXG00000017568	tsen34	85	37.705	ENSSBOG00000016017	TSEN34	98	37.793	Saimiri_boliviensis_boliviensis
ENSAMXG00000017568	tsen34	61	62.437	ENSSFOG00015017579	tsen34	82	61.809	Scleropages_formosus
ENSAMXG00000017568	tsen34	87	54.610	ENSSMAG00000005214	tsen34	96	54.610	Scophthalmus_maximus
ENSAMXG00000017568	tsen34	87	55.516	ENSSDUG00000005391	tsen34	92	55.516	Seriola_dumerili
ENSAMXG00000017568	tsen34	90	54.983	ENSSLDG00000006144	tsen34	88	56.383	Seriola_lalandi_dorsalis
ENSAMXG00000017568	tsen34	73	37.313	ENSSARG00000005857	TSEN34	71	37.313	Sorex_araneus
ENSAMXG00000017568	tsen34	87	43.599	ENSSPUG00000008447	TSEN34	99	43.599	Sphenodon_punctatus
ENSAMXG00000017568	tsen34	90	55.556	ENSSPAG00000010512	tsen34	96	55.556	Stegastes_partitus
ENSAMXG00000017568	tsen34	86	38.907	ENSSSCG00000003268	TSEN34	99	38.907	Sus_scrofa
ENSAMXG00000017568	tsen34	88	50.709	ENSTRUG00000000787	tsen34	90	50.709	Takifugu_rubripes
ENSAMXG00000017568	tsen34	87	51.839	ENSTNIG00000011201	tsen34	99	52.174	Tetraodon_nigroviridis
ENSAMXG00000017568	tsen34	87	52.721	ENSTNIG00000001937	-	99	52.721	Tetraodon_nigroviridis
ENSAMXG00000017568	tsen34	86	37.097	ENSTTRG00000006571	TSEN34	99	37.097	Tursiops_truncatus
ENSAMXG00000017568	tsen34	86	37.742	ENSUAMG00000008701	TSEN34	99	37.097	Ursus_americanus
ENSAMXG00000017568	tsen34	86	37.419	ENSVVUG00000008211	TSEN34	99	38.710	Vulpes_vulpes
ENSAMXG00000017568	tsen34	87	40.404	ENSXETG00000004597	tsen34	99	40.404	Xenopus_tropicalis
ENSAMXG00000017568	tsen34	92	57.338	ENSXMAG00000024266	tsen34	97	58.042	Xiphophorus_maculatus