EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000017678 (Gene tree)
Gene ID
103029167
Gene Symbol
hbp1
Alias
wu:fj62c10|zgc:112297
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
7393 bases
Position
chr8:14710228-14717620
Accession
103029167
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000018206AXHPF08517.123.3e-3611
ENSAMXP00000052618AXHPF08517.123.5e-3611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000018206-1506XM_007228180ENSAMXP00000018206501 (aa)XP_007228242W5LEE4
ENSAMXT00000057400-1545XM_007228179ENSAMXP00000052618514 (aa)XP_007228241UPI000BBD558D
Gene Model
Click here to download ENSAMXG00000017678's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017678's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000017678hbp19765.835ENSG00000105856HBP110063.900Homo_sapiens
ENSAMXG00000017678hbp19376.660ENSAPOG00000015816hbp19975.589Acanthochromis_polyacanthus
ENSAMXG00000017678hbp19866.089ENSAMEG00000013492HBP19964.147Ailuropoda_melanoleuca
ENSAMXG00000017678hbp19661.475ENSACIG00000019093-9661.191Amphilophus_citrinellus
ENSAMXG00000017678hbp19275.269ENSACIG00000018873hbp19274.194Amphilophus_citrinellus
ENSAMXG00000017678hbp19761.252ENSAOCG00000001429-9961.252Amphiprion_ocellaris
ENSAMXG00000017678hbp19376.445ENSAOCG00000010889hbp19975.375Amphiprion_ocellaris
ENSAMXG00000017678hbp19761.100ENSAPEG00000022589-9960.707Amphiprion_percula
ENSAMXG00000017678hbp19376.017ENSAPEG00000002330hbp19974.946Amphiprion_percula
ENSAMXG00000017678hbp19662.076ENSATEG00000003902-9664.240Anabas_testudineus
ENSAMXG00000017678hbp19375.589ENSATEG00000016411hbp19974.732Anabas_testudineus
ENSAMXG00000017678hbp19766.151ENSAPLG00000007110HBP110065.637Anas_platyrhynchos
ENSAMXG00000017678hbp19763.198ENSACAG00000015023HBP19962.620Anolis_carolinensis
ENSAMXG00000017678hbp19865.774ENSANAG00000022302HBP110063.900Aotus_nancymaae
ENSAMXG00000017678hbp19760.078ENSACLG00000003606HBP110059.491Astatotilapia_calliptera
ENSAMXG00000017678hbp19377.088ENSACLG00000004758hbp19576.017Astatotilapia_calliptera
ENSAMXG00000017678hbp110064.461ENSBTAG00000005524HBP110063.498Bos_taurus
ENSAMXG00000017678hbp19865.966ENSCJAG00000016260HBP19964.038Callithrix_jacchus
ENSAMXG00000017678hbp110066.730ENSCAFG00000003939HBP110064.068Canis_familiaris
ENSAMXG00000017678hbp110066.730ENSCAFG00020023119HBP110064.068Canis_lupus_dingo
ENSAMXG00000017678hbp19764.922ENSCHIG00000024405HBP110063.938Capra_hircus
ENSAMXG00000017678hbp110065.226ENSTSYG00000010057HBP110063.760Carlito_syrichta
ENSAMXG00000017678hbp19865.116ENSCAPG00000017460HBP19963.566Cavia_aperea
ENSAMXG00000017678hbp110065.275ENSCPOG00000002375HBP110063.567Cavia_porcellus
ENSAMXG00000017678hbp19866.157ENSCCAG00000026359HBP110064.093Cebus_capucinus
ENSAMXG00000017678hbp19865.966ENSCATG00000021910HBP110063.900Cercocebus_atys
ENSAMXG00000017678hbp110065.720ENSCLAG00000005170HBP110064.078Chinchilla_lanigera
ENSAMXG00000017678hbp110065.543ENSCSAG00000011395HBP110063.465Chlorocebus_sabaeus
ENSAMXG00000017678hbp16992.308ENSCHOG00000006820HBP17092.308Choloepus_hoffmanni
ENSAMXG00000017678hbp110066.604ENSCPBG00000000954HBP110065.094Chrysemys_picta_bellii
ENSAMXG00000017678hbp19866.157ENSCANG00000022804HBP110064.093Colobus_angolensis_palliatus
ENSAMXG00000017678hbp110065.595ENSCGRG00001014437Hbp110062.760Cricetulus_griseus_chok1gshd
ENSAMXG00000017678hbp110065.595ENSCGRG00000013859Hbp110062.760Cricetulus_griseus_crigri
ENSAMXG00000017678hbp19375.855ENSCSEG00000003373hbp19975.214Cynoglossus_semilaevis
ENSAMXG00000017678hbp19375.803ENSCVAG00000008930hbp19974.732Cyprinodon_variegatus
ENSAMXG00000017678hbp19761.414ENSCVAG00000008501-9961.414Cyprinodon_variegatus
ENSAMXG00000017678hbp110082.306ENSDARG00000028517hbp110082.857Danio_rerio
ENSAMXG00000017678hbp110065.160ENSDNOG00000004405HBP19663.830Dasypus_novemcinctus
ENSAMXG00000017678hbp16861.732ENSDORG00000010576Hbp19760.894Dipodomys_ordii
ENSAMXG00000017678hbp19759.029ENSETEG00000018542HBP110056.893Echinops_telfairi
ENSAMXG00000017678hbp19146.458ENSEBUG00000016475hbp18446.444Eptatretus_burgeri
ENSAMXG00000017678hbp110065.283ENSEASG00005017469HBP19364.326Equus_asinus_asinus
ENSAMXG00000017678hbp110065.283ENSECAG00000020969HBP19964.729Equus_caballus
ENSAMXG00000017678hbp19664.919ENSELUG00000017031-9264.300Esox_lucius
ENSAMXG00000017678hbp19376.170ENSELUG00000006967hbp19975.319Esox_lucius
ENSAMXG00000017678hbp19865.326ENSFCAG00000005858HBP19264.162Felis_catus
ENSAMXG00000017678hbp19965.472ENSFALG00000010259HBP19964.340Ficedula_albicollis
ENSAMXG00000017678hbp110065.341ENSFDAG00000007897HBP110063.826Fukomys_damarensis
ENSAMXG00000017678hbp19759.642ENSFHEG00000014389-9959.443Fundulus_heteroclitus
ENSAMXG00000017678hbp19375.641ENSFHEG00000008222hbp19974.946Fundulus_heteroclitus
ENSAMXG00000017678hbp19372.747ENSGMOG00000013782hbp19972.318Gadus_morhua
ENSAMXG00000017678hbp110066.102ENSGALG00000008050HBP110064.783Gallus_gallus
ENSAMXG00000017678hbp19376.874ENSGAFG00000021976hbp19975.589Gambusia_affinis
ENSAMXG00000017678hbp19762.351ENSGAFG00000004651-9962.151Gambusia_affinis
ENSAMXG00000017678hbp19373.885ENSGACG00000010054hbp19972.553Gasterosteus_aculeatus
ENSAMXG00000017678hbp19361.359ENSGACG00000019192-9560.554Gasterosteus_aculeatus
ENSAMXG00000017678hbp110065.977ENSGAGG00000023042HBP110064.474Gopherus_agassizii
ENSAMXG00000017678hbp19865.583ENSGGOG00000007788HBP110063.707Gorilla_gorilla
ENSAMXG00000017678hbp19760.547ENSHBUG00000016198-10060.156Haplochromis_burtoni
ENSAMXG00000017678hbp19575.891ENSHBUG00000004967hbp19774.843Haplochromis_burtoni
ENSAMXG00000017678hbp110065.348ENSHGLG00000019188HBP110064.218Heterocephalus_glaber_female
ENSAMXG00000017678hbp110065.348ENSHGLG00100001912HBP110064.218Heterocephalus_glaber_male
ENSAMXG00000017678hbp19749.902ENSHGLG00100014672-10048.622Heterocephalus_glaber_male
ENSAMXG00000017678hbp19369.379ENSHCOG00000011877hbp110069.807Hippocampus_comes
ENSAMXG00000017678hbp19754.065ENSHCOG00000010740-9453.862Hippocampus_comes
ENSAMXG00000017678hbp110087.078ENSIPUG00000023044hbp110088.668Ictalurus_punctatus
ENSAMXG00000017678hbp110065.909ENSSTOG00000013846HBP110063.636Ictidomys_tridecemlineatus
ENSAMXG00000017678hbp110065.530ENSJJAG00000015341Hbp110063.258Jaculus_jaculus
ENSAMXG00000017678hbp19375.589ENSKMAG00000003132hbp19974.732Kryptolebias_marmoratus
ENSAMXG00000017678hbp19261.123ENSKMAG00000000266-9461.123Kryptolebias_marmoratus
ENSAMXG00000017678hbp19376.017ENSLBEG00000012078hbp19975.161Labrus_bergylta
ENSAMXG00000017678hbp19760.277ENSLBEG00000023959-10060.474Labrus_bergylta
ENSAMXG00000017678hbp110066.352ENSLACG00000009119HBP19865.217Latimeria_chalumnae
ENSAMXG00000017678hbp110074.194ENSLOCG00000015822hbp110073.055Lepisosteus_oculatus
ENSAMXG00000017678hbp19764.547ENSLAFG00000005317HBP110062.209Loxodonta_africana
ENSAMXG00000017678hbp19865.966ENSMFAG00000030375HBP110063.900Macaca_fascicularis
ENSAMXG00000017678hbp19765.830ENSMMUG00000015409HBP19863.689Macaca_mulatta
ENSAMXG00000017678hbp19764.103ENSMNEG00000037516HBP110063.511Macaca_nemestrina
ENSAMXG00000017678hbp19866.348ENSMLEG00000031993HBP110064.286Mandrillus_leucophaeus
ENSAMXG00000017678hbp19376.559ENSMAMG00000023227hbp19976.559Mastacembelus_armatus
ENSAMXG00000017678hbp19759.266ENSMAMG00000023588-10059.846Mastacembelus_armatus
ENSAMXG00000017678hbp19760.078ENSMZEG00005015065HBP110059.491Maylandia_zebra
ENSAMXG00000017678hbp19276.890ENSMZEG00005005999hbp17975.810Maylandia_zebra
ENSAMXG00000017678hbp19867.245ENSMGAG00000006880HBP19865.896Meleagris_gallopavo
ENSAMXG00000017678hbp110064.839ENSMAUG00000011449Hbp110062.571Mesocricetus_auratus
ENSAMXG00000017678hbp110065.725ENSMICG00000012858HBP110064.078Microcebus_murinus
ENSAMXG00000017678hbp110065.406ENSMOCG00000019227Hbp110062.782Microtus_ochrogaster
ENSAMXG00000017678hbp19263.090ENSMMOG00000010239-9861.803Mola_mola
ENSAMXG00000017678hbp19969.679ENSMMOG00000012207hbp110068.876Mola_mola
ENSAMXG00000017678hbp110066.415ENSMODG00000016376HBP19164.717Monodelphis_domestica
ENSAMXG00000017678hbp19375.803ENSMALG00000009884hbp19975.375Monopterus_albus
ENSAMXG00000017678hbp19459.916ENSMALG00000010834-9659.494Monopterus_albus
ENSAMXG00000017678hbp110064.906MGP_CAROLIEiJ_G0017683Hbp110062.664Mus_caroli
ENSAMXG00000017678hbp110064.906ENSMUSG00000002996Hbp110062.664Mus_musculus
ENSAMXG00000017678hbp110065.226MGP_PahariEiJ_G0029441Hbp110062.991Mus_pahari
ENSAMXG00000017678hbp110064.906MGP_SPRETEiJ_G0018525Hbp110062.664Mus_spretus
ENSAMXG00000017678hbp110065.849ENSMPUG00000018249HBP110064.516Mustela_putorius_furo
ENSAMXG00000017678hbp19865.703ENSMLUG00000012425HBP19864.147Myotis_lucifugus
ENSAMXG00000017678hbp110065.152ENSNGAG00000023485Hbp110062.879Nannospalax_galili
ENSAMXG00000017678hbp19575.891ENSNBRG00000001405hbp19774.843Neolamprologus_brichardi
ENSAMXG00000017678hbp19761.057ENSNBRG00000017820-10060.665Neolamprologus_brichardi
ENSAMXG00000017678hbp19865.962ENSNLEG00000008761HBP110064.078Nomascus_leucogenys
ENSAMXG00000017678hbp18762.931ENSMEUG00000011116HBP19060.991Notamacropus_eugenii
ENSAMXG00000017678hbp16992.308ENSOPRG00000005315HBP17092.308Ochotona_princeps
ENSAMXG00000017678hbp110065.909ENSODEG00000001327-10063.636Octodon_degus
ENSAMXG00000017678hbp19753.673ENSODEG00000000482-9953.374Octodon_degus
ENSAMXG00000017678hbp19749.299ENSODEG00000010517-9947.695Octodon_degus
ENSAMXG00000017678hbp19377.088ENSONIG00000008523hbp19976.017Oreochromis_niloticus
ENSAMXG00000017678hbp19761.024ENSONIG00000011868-10061.024Oreochromis_niloticus
ENSAMXG00000017678hbp19765.558ENSOANG00000003174HBP110065.362Ornithorhynchus_anatinus
ENSAMXG00000017678hbp19766.211ENSOCUG00000012758HBP110065.039Oryctolagus_cuniculus
ENSAMXG00000017678hbp19760.583ENSORLG00000009474-9960.827Oryzias_latipes
ENSAMXG00000017678hbp19375.427ENSORLG00000004396hbp19974.090Oryzias_latipes
ENSAMXG00000017678hbp19375.214ENSORLG00020000370hbp19974.090Oryzias_latipes_hni
ENSAMXG00000017678hbp19760.777ENSORLG00020004269-9961.024Oryzias_latipes_hni
ENSAMXG00000017678hbp19375.214ENSORLG00015006557hbp19973.876Oryzias_latipes_hsok
ENSAMXG00000017678hbp19376.068ENSOMEG00000012837hbp19974.732Oryzias_melastigma
ENSAMXG00000017678hbp110061.315ENSOMEG00000013045-10060.735Oryzias_melastigma
ENSAMXG00000017678hbp19766.409ENSOGAG00000013102HBP110064.272Otolemur_garnettii
ENSAMXG00000017678hbp110064.272ENSOARG00000005055HBP110063.308Ovis_aries
ENSAMXG00000017678hbp19865.774ENSPPAG00000042116HBP110063.900Pan_paniscus
ENSAMXG00000017678hbp19765.385ENSPPRG00000007240HBP110064.217Panthera_pardus
ENSAMXG00000017678hbp19763.462ENSPTIG00000002734HBP110062.282Panthera_tigris_altaica
ENSAMXG00000017678hbp19865.774ENSPTRG00000019575HBP110063.900Pan_troglodytes
ENSAMXG00000017678hbp19865.966ENSPANG00000024385HBP110063.900Papio_anubis
ENSAMXG00000017678hbp110064.143ENSPKIG00000016269HBP110063.944Paramormyrops_kingsleyae
ENSAMXG00000017678hbp19775.407ENSPKIG00000016967hbp19875.813Paramormyrops_kingsleyae
ENSAMXG00000017678hbp110067.170ENSPSIG00000012478HBP19465.660Pelodiscus_sinensis
ENSAMXG00000017678hbp19474.481ENSPMGG00000005789hbp19873.597Periophthalmus_magnuspinnatus
ENSAMXG00000017678hbp19356.989ENSPMGG00000008031-9456.774Periophthalmus_magnuspinnatus
ENSAMXG00000017678hbp110065.406ENSPEMG00000014801Hbp110063.138Peromyscus_maniculatus_bairdii
ENSAMXG00000017678hbp19150.964ENSPMAG00000002631hbp19749.095Petromyzon_marinus
ENSAMXG00000017678hbp110066.478ENSPCIG00000004275HBP19164.783Phascolarctos_cinereus
ENSAMXG00000017678hbp19377.088ENSPFOG00000003951hbp19975.803Poecilia_formosa
ENSAMXG00000017678hbp19961.448ENSPFOG00000012271-9761.448Poecilia_formosa
ENSAMXG00000017678hbp19264.935ENSPLAG00000012669-9864.935Poecilia_latipinna
ENSAMXG00000017678hbp19377.088ENSPLAG00000003142hbp19975.803Poecilia_latipinna
ENSAMXG00000017678hbp19377.088ENSPMEG00000003800hbp19975.803Poecilia_mexicana
ENSAMXG00000017678hbp19762.178ENSPMEG00000015095-9962.178Poecilia_mexicana
ENSAMXG00000017678hbp15770.035ENSPREG00000015242-8468.990Poecilia_reticulata
ENSAMXG00000017678hbp19376.874ENSPREG00000004000hbp19975.589Poecilia_reticulata
ENSAMXG00000017678hbp110064.981ENSPPYG00000017898HBP19963.653Pongo_abelii
ENSAMXG00000017678hbp19664.188ENSPCAG00000014060HBP110063.583Procavia_capensis
ENSAMXG00000017678hbp18371.429ENSPCOG00000015370HBP19968.586Propithecus_coquereli
ENSAMXG00000017678hbp19765.192ENSPVAG00000014543HBP110063.636Pteropus_vampyrus
ENSAMXG00000017678hbp19761.057ENSPNYG00000015063HBP110060.470Pundamilia_nyererei
ENSAMXG00000017678hbp19377.088ENSPNYG00000001079hbp19576.017Pundamilia_nyererei
ENSAMXG00000017678hbp110092.032ENSPNAG00000029977hbp110092.231Pygocentrus_nattereri
ENSAMXG00000017678hbp110064.906ENSRNOG00000008927Hbp110062.664Rattus_norvegicus
ENSAMXG00000017678hbp19757.227ENSRBIG00000042410HBP110055.599Rhinopithecus_bieti
ENSAMXG00000017678hbp19865.769ENSRROG00000036622HBP110063.689Rhinopithecus_roxellana
ENSAMXG00000017678hbp19865.769ENSSBOG00000023603HBP110063.689Saimiri_boliviensis_boliviensis
ENSAMXG00000017678hbp110066.478ENSSHAG00000010948HBP19865.192Sarcophilus_harrisii
ENSAMXG00000017678hbp19777.445ENSSFOG00015011155hbp110075.848Scleropages_formosus
ENSAMXG00000017678hbp19376.017ENSSMAG00000009892hbp19975.375Scophthalmus_maximus
ENSAMXG00000017678hbp19957.276ENSSMAG00000012631-9758.192Scophthalmus_maximus
ENSAMXG00000017678hbp19960.152ENSSDUG00000015387-9959.772Seriola_dumerili
ENSAMXG00000017678hbp19376.874ENSSDUG00000022273hbp19976.017Seriola_dumerili
ENSAMXG00000017678hbp19376.874ENSSLDG00000009669hbp19976.017Seriola_lalandi_dorsalis
ENSAMXG00000017678hbp19362.500ENSSLDG00000017324-9962.712Seriola_lalandi_dorsalis
ENSAMXG00000017678hbp18763.774ENSSARG00000007731HBP110060.954Sorex_araneus
ENSAMXG00000017678hbp19867.375ENSSPUG00000019157HBP19565.637Sphenodon_punctatus
ENSAMXG00000017678hbp19376.445ENSSPAG00000004739hbp19975.375Stegastes_partitus
ENSAMXG00000017678hbp19762.008ENSSPAG00000009193-9961.811Stegastes_partitus
ENSAMXG00000017678hbp110066.038ENSSSCG00000035673HBP110064.981Sus_scrofa
ENSAMXG00000017678hbp19766.409ENSTGUG00000003100HBP110065.444Taeniopygia_guttata
ENSAMXG00000017678hbp19374.893ENSTRUG00000016990hbp19974.034Takifugu_rubripes
ENSAMXG00000017678hbp19255.957ENSTRUG00000011881-7955.128Takifugu_rubripes
ENSAMXG00000017678hbp19254.819ENSTNIG00000002023-9453.414Tetraodon_nigroviridis
ENSAMXG00000017678hbp19375.107ENSTNIG00000016027hbp19974.249Tetraodon_nigroviridis
ENSAMXG00000017678hbp19757.310ENSTBEG00000007793HBP110055.686Tupaia_belangeri
ENSAMXG00000017678hbp19766.731ENSTTRG00000006826HBP110065.175Tursiops_truncatus
ENSAMXG00000017678hbp110065.784ENSUAMG00000005951HBP110064.449Ursus_americanus
ENSAMXG00000017678hbp110065.784ENSUMAG00000018257HBP110064.449Ursus_maritimus
ENSAMXG00000017678hbp17364.323ENSVPAG00000008629HBP19362.016Vicugna_pacos
ENSAMXG00000017678hbp110066.730ENSVVUG00000022009HBP110064.068Vulpes_vulpes
ENSAMXG00000017678hbp110063.208ENSXETG00000005922hbp110062.830Xenopus_tropicalis
ENSAMXG00000017678hbp19674.021ENSXCOG00000020795hbp19175.162Xiphophorus_couchianus
ENSAMXG00000017678hbp19761.706ENSXMAG00000007586-9961.706Xiphophorus_maculatus
ENSAMXG00000017678hbp19376.231ENSXMAG00000016455hbp19975.161Xiphophorus_maculatus

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