EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000017702 (Gene tree)
Gene ID: 103033621
Gene Symbol: sall1b
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8104 bases
Position: chr8:14849525-14857628
Accession: 103033621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018234	zf-C2H2	PF00096.26	1.6e-30	1	5
ENSAMXP00000018234	zf-C2H2	PF00096.26	1.6e-30	2	5
ENSAMXP00000018234	zf-C2H2	PF00096.26	1.6e-30	3	5
ENSAMXP00000018234	zf-C2H2	PF00096.26	1.6e-30	4	5
ENSAMXP00000018234	zf-C2H2	PF00096.26	1.6e-30	5	5
ENSAMXP00000051722	zf-C2H2	PF00096.26	1.6e-30	1	5
ENSAMXP00000051722	zf-C2H2	PF00096.26	1.6e-30	2	5
ENSAMXP00000051722	zf-C2H2	PF00096.26	1.6e-30	3	5
ENSAMXP00000051722	zf-C2H2	PF00096.26	1.6e-30	4	5
ENSAMXP00000051722	zf-C2H2	PF00096.26	1.6e-30	5	5
ENSAMXP00000018234	zf-met	PF12874.7	4.6e-20	1	3
ENSAMXP00000018234	zf-met	PF12874.7	4.6e-20	2	3
ENSAMXP00000018234	zf-met	PF12874.7	4.6e-20	3	3
ENSAMXP00000051722	zf-met	PF12874.7	4.6e-20	1	3
ENSAMXP00000051722	zf-met	PF12874.7	4.6e-20	2	3
ENSAMXP00000051722	zf-met	PF12874.7	4.6e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018234	-	5348	XM_022672176	ENSAMXP00000018234	1301 (aa)	XP_022527897	W5LEH2
ENSAMXT00000049699	-	5508	XM_007228195	ENSAMXP00000051722	1301 (aa)	XP_007228257	UPI000BBDB26B

Gene Model

Click here to download ENSAMXG00000017702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000017702	sall1b	67	69.065	ENSAMXG00000035442	sall3b	73	69.065
ENSAMXG00000017702	sall1b	57	38.462	ENSAMXG00000030911	-	65	47.727
ENSAMXG00000017702	sall1b	68	64.327	ENSAMXG00000011185	sall3a	88	64.327
ENSAMXG00000017702	sall1b	80	67.308	ENSAMXG00000001254	sall4	76	67.308
ENSAMXG00000017702	sall1b	57	47.727	ENSAMXG00000009558	-	93	47.727
ENSAMXG00000017702	sall1b	57	40.659	ENSAMXG00000035437	-	99	41.758
ENSAMXG00000017702	sall1b	61	42.188	ENSAMXG00000029178	-	97	42.188
ENSAMXG00000017702	sall1b	58	46.429	ENSAMXG00000040630	-	94	46.429
ENSAMXG00000017702	sall1b	99	53.778	ENSAMXG00000018599	sall1a	99	53.259
ENSAMXG00000017702	sall1b	58	47.458	ENSAMXG00000013492	-	94	50.000
ENSAMXG00000017702	sall1b	58	48.936	ENSAMXG00000040806	-	88	48.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017702	sall1b	99	51.876	ENSG00000103449	SALL1	100	51.515	Homo_sapiens
ENSAMXG00000017702	sall1b	99	52.550	ENSAPOG00000022764	sall1a	99	51.923	Acanthochromis_polyacanthus
ENSAMXG00000017702	sall1b	99	50.294	ENSAMEG00000006817	SALL1	99	50.964	Ailuropoda_melanoleuca
ENSAMXG00000017702	sall1b	99	50.735	ENSACIG00000004231	sall1a	99	51.486	Amphilophus_citrinellus
ENSAMXG00000017702	sall1b	99	52.624	ENSAOCG00000002800	sall1a	99	51.997	Amphiprion_ocellaris
ENSAMXG00000017702	sall1b	99	52.476	ENSAPEG00000010179	sall1a	99	51.849	Amphiprion_percula
ENSAMXG00000017702	sall1b	99	51.997	ENSATEG00000003006	sall1a	99	51.403	Anabas_testudineus
ENSAMXG00000017702	sall1b	99	53.547	ENSAPLG00000003356	SALL1	99	53.055	Anas_platyrhynchos
ENSAMXG00000017702	sall1b	97	52.567	ENSACAG00000014399	SALL1	94	52.151	Anolis_carolinensis
ENSAMXG00000017702	sall1b	99	51.648	ENSANAG00000027238	SALL1	99	51.365	Aotus_nancymaae
ENSAMXG00000017702	sall1b	99	50.405	ENSACLG00000017148	sall1a	99	52.058	Astatotilapia_calliptera
ENSAMXG00000017702	sall1b	99	51.522	ENSBTAG00000008544	SALL1	99	51.037	Bos_taurus
ENSAMXG00000017702	sall1b	99	51.724	ENSCJAG00000001740	SALL1	99	51.325	Callithrix_jacchus
ENSAMXG00000017702	sall1b	91	63.462	ENSCAFG00000009755	SALL1	93	63.462	Canis_familiaris
ENSAMXG00000017702	sall1b	99	50.585	ENSCAFG00020002842	SALL1	99	51.513	Canis_lupus_dingo
ENSAMXG00000017702	sall1b	99	51.004	ENSCHIG00000026074	SALL1	99	50.519	Capra_hircus
ENSAMXG00000017702	sall1b	99	51.923	ENSTSYG00000029464	SALL1	99	52.264	Carlito_syrichta
ENSAMXG00000017702	sall1b	97	52.197	ENSCPOG00000006564	SALL1	99	52.588	Cavia_porcellus
ENSAMXG00000017702	sall1b	99	50.330	ENSCCAG00000001639	SALL1	99	49.963	Cebus_capucinus
ENSAMXG00000017702	sall1b	99	52.132	ENSCATG00000004982	SALL1	99	51.553	Cercocebus_atys
ENSAMXG00000017702	sall1b	99	51.183	ENSCLAG00000006380	SALL1	99	51.661	Chinchilla_lanigera
ENSAMXG00000017702	sall1b	99	50.659	ENSCSAG00000005319	SALL1	99	50.885	Chlorocebus_sabaeus
ENSAMXG00000017702	sall1b	56	63.462	ENSCHOG00000000800	-	57	64.179	Choloepus_hoffmanni
ENSAMXG00000017702	sall1b	91	63.462	ENSCPBG00000015924	SALL1	95	63.462	Chrysemys_picta_bellii
ENSAMXG00000017702	sall1b	99	51.139	ENSCANG00000036664	SALL1	99	51.793	Colobus_angolensis_palliatus
ENSAMXG00000017702	sall1b	99	51.111	ENSCGRG00001023314	-	99	51.365	Cricetulus_griseus_chok1gshd
ENSAMXG00000017702	sall1b	97	51.403	ENSCGRG00000009496	Sall1	99	51.711	Cricetulus_griseus_crigri
ENSAMXG00000017702	sall1b	99	51.212	ENSCSEG00000009349	sall1a	99	51.375	Cynoglossus_semilaevis
ENSAMXG00000017702	sall1b	90	63.830	ENSCVAG00000020513	sall1a	99	63.830	Cyprinodon_variegatus
ENSAMXG00000017702	sall1b	99	50.840	ENSDARG00000075891	sall1b	99	50.114	Danio_rerio
ENSAMXG00000017702	sall1b	99	52.802	ENSDARG00000074319	sall1a	99	52.871	Danio_rerio
ENSAMXG00000017702	sall1b	99	50.732	ENSDNOG00000016413	SALL1	99	51.218	Dasypus_novemcinctus
ENSAMXG00000017702	sall1b	97	53.303	ENSETEG00000015150	SALL1	99	53.058	Echinops_telfairi
ENSAMXG00000017702	sall1b	63	39.663	ENSEBUG00000008798	SALL1	79	38.184	Eptatretus_burgeri
ENSAMXG00000017702	sall1b	59	65.385	ENSEBUG00000011732	SALL1	64	65.385	Eptatretus_burgeri
ENSAMXG00000017702	sall1b	99	51.441	ENSEASG00005014602	SALL1	99	51.446	Equus_asinus_asinus
ENSAMXG00000017702	sall1b	91	49.308	ENSECAG00000011334	SALL1	99	49.552	Equus_caballus
ENSAMXG00000017702	sall1b	97	52.141	ENSEEUG00000002014	SALL1	99	51.829	Erinaceus_europaeus
ENSAMXG00000017702	sall1b	99	46.394	ENSELUG00000017774	-	99	47.520	Esox_lucius
ENSAMXG00000017702	sall1b	99	50.631	ENSELUG00000006159	sall1a	99	50.389	Esox_lucius
ENSAMXG00000017702	sall1b	99	50.847	ENSFCAG00000024654	SALL1	99	51.513	Felis_catus
ENSAMXG00000017702	sall1b	99	53.708	ENSFALG00000000074	SALL1	99	53.139	Ficedula_albicollis
ENSAMXG00000017702	sall1b	99	52.325	ENSFHEG00000012579	sall1a	99	51.811	Fundulus_heteroclitus
ENSAMXG00000017702	sall1b	68	63.265	ENSFHEG00000008424	-	99	63.265	Fundulus_heteroclitus
ENSAMXG00000017702	sall1b	99	50.988	ENSGMOG00000006103	sall1a	99	51.109	Gadus_morhua
ENSAMXG00000017702	sall1b	89	70.922	ENSGMOG00000013383	-	73	66.456	Gadus_morhua
ENSAMXG00000017702	sall1b	99	53.438	ENSGALG00000039238	SALL1	99	52.946	Gallus_gallus
ENSAMXG00000017702	sall1b	99	52.701	ENSGAFG00000009964	sall1a	99	52.426	Gambusia_affinis
ENSAMXG00000017702	sall1b	99	52.339	ENSGACG00000016702	sall1a	99	51.973	Gasterosteus_aculeatus
ENSAMXG00000017702	sall1b	99	52.963	ENSGAGG00000013979	SALL1	99	53.210	Gopherus_agassizii
ENSAMXG00000017702	sall1b	99	51.865	ENSGGOG00000000663	SALL1	99	51.511	Gorilla_gorilla
ENSAMXG00000017702	sall1b	99	52.840	ENSHBUG00000022005	sall1a	99	52.061	Haplochromis_burtoni
ENSAMXG00000017702	sall1b	99	51.223	ENSHGLG00000004288	-	99	51.513	Heterocephalus_glaber_female
ENSAMXG00000017702	sall1b	99	51.223	ENSHGLG00100017496	SALL1	99	51.513	Heterocephalus_glaber_male
ENSAMXG00000017702	sall1b	99	51.209	ENSHCOG00000000974	sall1a	99	50.892	Hippocampus_comes
ENSAMXG00000017702	sall1b	99	53.146	ENSIPUG00000016265	SALL1	99	52.862	Ictalurus_punctatus
ENSAMXG00000017702	sall1b	100	62.357	ENSIPUG00000022928	sall1b	99	62.280	Ictalurus_punctatus
ENSAMXG00000017702	sall1b	99	51.335	ENSSTOG00000020885	SALL1	99	51.675	Ictidomys_tridecemlineatus
ENSAMXG00000017702	sall1b	99	52.461	ENSKMAG00000016681	sall1a	99	51.819	Kryptolebias_marmoratus
ENSAMXG00000017702	sall1b	98	51.161	ENSLBEG00000012207	sall1a	95	50.454	Labrus_bergylta
ENSAMXG00000017702	sall1b	95	36.761	ENSLACG00000014018	-	96	35.945	Latimeria_chalumnae
ENSAMXG00000017702	sall1b	99	52.242	ENSLACG00000003556	SALL1	99	52.197	Latimeria_chalumnae
ENSAMXG00000017702	sall1b	99	53.585	ENSLOCG00000007283	sall1b	99	53.378	Lepisosteus_oculatus
ENSAMXG00000017702	sall1b	97	51.963	ENSLAFG00000015251	SALL1	98	52.238	Loxodonta_africana
ENSAMXG00000017702	sall1b	99	51.684	ENSMFAG00000003298	SALL1	99	51.622	Macaca_fascicularis
ENSAMXG00000017702	sall1b	87	54.453	ENSMMUG00000017200	SALL1	99	51.790	Macaca_mulatta
ENSAMXG00000017702	sall1b	87	54.453	ENSMNEG00000034770	SALL1	99	51.749	Macaca_nemestrina
ENSAMXG00000017702	sall1b	99	51.803	ENSMLEG00000036406	SALL1	99	51.793	Mandrillus_leucophaeus
ENSAMXG00000017702	sall1b	99	52.155	ENSMAMG00000004164	sall1a	99	51.990	Mastacembelus_armatus
ENSAMXG00000017702	sall1b	99	52.184	ENSMZEG00005006479	sall1a	99	51.488	Maylandia_zebra
ENSAMXG00000017702	sall1b	97	54.006	ENSMGAG00000004704	SALL1	98	53.497	Meleagris_gallopavo
ENSAMXG00000017702	sall1b	99	50.224	ENSMAUG00000019093	Sall1	99	51.156	Mesocricetus_auratus
ENSAMXG00000017702	sall1b	99	50.998	ENSMICG00000036486	SALL1	99	51.484	Microcebus_murinus
ENSAMXG00000017702	sall1b	99	52.238	ENSMMOG00000016400	sall1a	99	51.520	Mola_mola
ENSAMXG00000017702	sall1b	99	52.553	ENSMODG00000013114	SALL1	99	52.206	Monodelphis_domestica
ENSAMXG00000017702	sall1b	99	52.846	ENSMALG00000013400	sall1a	99	52.190	Monopterus_albus
ENSAMXG00000017702	sall1b	99	50.810	MGP_CAROLIEiJ_G0031362	Sall1	99	50.624	Mus_caroli
ENSAMXG00000017702	sall1b	99	50.920	ENSMUSG00000031665	Sall1	99	50.774	Mus_musculus
ENSAMXG00000017702	sall1b	99	51.373	MGP_PahariEiJ_G0022961	Sall1	99	50.625	Mus_pahari
ENSAMXG00000017702	sall1b	99	50.920	MGP_SPRETEiJ_G0032480	Sall1	99	50.774	Mus_spretus
ENSAMXG00000017702	sall1b	97	51.264	ENSMPUG00000003265	SALL1	95	51.031	Mustela_putorius_furo
ENSAMXG00000017702	sall1b	97	51.118	ENSMLUG00000015541	SALL1	98	51.229	Myotis_lucifugus
ENSAMXG00000017702	sall1b	99	50.441	ENSNBRG00000009307	sall1a	99	52.058	Neolamprologus_brichardi
ENSAMXG00000017702	sall1b	92	68.750	ENSNLEG00000001008	SALL1	98	68.750	Nomascus_leucogenys
ENSAMXG00000017702	sall1b	99	52.281	ENSMEUG00000012206	SALL1	99	51.786	Notamacropus_eugenii
ENSAMXG00000017702	sall1b	74	59.615	ENSOPRG00000005645	SALL1	71	59.615	Ochotona_princeps
ENSAMXG00000017702	sall1b	99	51.515	ENSODEG00000003685	SALL1	99	51.967	Octodon_degus
ENSAMXG00000017702	sall1b	90	61.538	ENSONIG00000002831	sall1a	99	61.538	Oreochromis_niloticus
ENSAMXG00000017702	sall1b	77	73.006	ENSOANG00000013399	SALL1	94	69.022	Ornithorhynchus_anatinus
ENSAMXG00000017702	sall1b	99	51.393	ENSORLG00000013827	sall1a	99	51.141	Oryzias_latipes
ENSAMXG00000017702	sall1b	99	51.320	ENSORLG00020020570	sall1a	99	51.141	Oryzias_latipes_hni
ENSAMXG00000017702	sall1b	99	51.320	ENSORLG00015018830	sall1a	99	51.067	Oryzias_latipes_hsok
ENSAMXG00000017702	sall1b	99	51.732	ENSOMEG00000016043	sall1a	99	51.803	Oryzias_melastigma
ENSAMXG00000017702	sall1b	99	51.520	ENSOGAG00000027316	SALL1	99	51.329	Otolemur_garnettii
ENSAMXG00000017702	sall1b	99	47.736	ENSOARG00000017583	SALL1	99	47.489	Ovis_aries
ENSAMXG00000017702	sall1b	97	39.100	ENSPPAG00000035136	-	97	38.936	Pan_paniscus
ENSAMXG00000017702	sall1b	97	52.489	ENSPPAG00000035657	SALL1	99	52.207	Pan_paniscus
ENSAMXG00000017702	sall1b	70	55.151	ENSPPRG00000023283	SALL1	99	51.293	Panthera_pardus
ENSAMXG00000017702	sall1b	74	66.854	ENSPTIG00000013539	-	94	63.462	Panthera_tigris_altaica
ENSAMXG00000017702	sall1b	99	52.164	ENSPTRG00000008108	SALL1	99	51.739	Pan_troglodytes
ENSAMXG00000017702	sall1b	97	39.239	ENSPTRG00000045256	-	98	39.060	Pan_troglodytes
ENSAMXG00000017702	sall1b	99	51.803	ENSPANG00000024176	SALL1	99	51.625	Papio_anubis
ENSAMXG00000017702	sall1b	99	53.038	ENSPKIG00000005383	-	99	52.620	Paramormyrops_kingsleyae
ENSAMXG00000017702	sall1b	99	52.487	ENSPKIG00000022251	sall1a	99	52.339	Paramormyrops_kingsleyae
ENSAMXG00000017702	sall1b	99	53.081	ENSPSIG00000008582	SALL1	99	52.757	Pelodiscus_sinensis
ENSAMXG00000017702	sall1b	99	50.291	ENSPMGG00000021788	sall1a	99	50.146	Periophthalmus_magnuspinnatus
ENSAMXG00000017702	sall1b	99	51.860	ENSPCIG00000017840	SALL1	99	51.755	Phascolarctos_cinereus
ENSAMXG00000017702	sall1b	97	52.995	ENSPFOG00000015799	sall1a	94	52.816	Poecilia_formosa
ENSAMXG00000017702	sall1b	99	52.833	ENSPLAG00000022539	sall1a	99	52.561	Poecilia_latipinna
ENSAMXG00000017702	sall1b	99	52.868	ENSPMEG00000020894	sall1a	99	52.741	Poecilia_mexicana
ENSAMXG00000017702	sall1b	99	52.928	ENSPREG00000006802	sall1a	99	52.374	Poecilia_reticulata
ENSAMXG00000017702	sall1b	90	63.462	ENSPPYG00000007345	SALL1	96	63.462	Pongo_abelii
ENSAMXG00000017702	sall1b	86	63.265	ENSPCAG00000008162	SALL1	93	63.265	Procavia_capensis
ENSAMXG00000017702	sall1b	99	50.920	ENSPCOG00000028192	SALL1	99	51.558	Propithecus_coquereli
ENSAMXG00000017702	sall1b	66	59.615	ENSPVAG00000015374	SALL1	99	59.615	Pteropus_vampyrus
ENSAMXG00000017702	sall1b	99	50.331	ENSPNYG00000010865	sall1a	99	51.982	Pundamilia_nyererei
ENSAMXG00000017702	sall1b	93	65.306	ENSPNAG00000028248	-	88	65.306	Pygocentrus_nattereri
ENSAMXG00000017702	sall1b	99	51.808	ENSPNAG00000023644	sall1a	99	51.484	Pygocentrus_nattereri
ENSAMXG00000017702	sall1b	100	76.435	ENSPNAG00000007442	sall1b	100	76.282	Pygocentrus_nattereri
ENSAMXG00000017702	sall1b	99	51.218	ENSRNOG00000013907	Sall1	99	51.221	Rattus_norvegicus
ENSAMXG00000017702	sall1b	87	54.538	ENSRBIG00000015707	SALL1	99	51.793	Rhinopithecus_bieti
ENSAMXG00000017702	sall1b	97	52.302	ENSRROG00000035777	SALL1	99	51.911	Rhinopithecus_roxellana
ENSAMXG00000017702	sall1b	99	51.537	ENSSBOG00000032186	SALL1	99	51.327	Saimiri_boliviensis_boliviensis
ENSAMXG00000017702	sall1b	99	52.659	ENSSHAG00000009477	SALL1	99	52.200	Sarcophilus_harrisii
ENSAMXG00000017702	sall1b	99	52.395	ENSSFOG00015020020	sall1a	99	52.033	Scleropages_formosus
ENSAMXG00000017702	sall1b	97	52.660	ENSSFOG00015001590	sall1a	98	51.589	Scleropages_formosus
ENSAMXG00000017702	sall1b	99	51.988	ENSSMAG00000009160	sall1a	99	51.589	Scophthalmus_maximus
ENSAMXG00000017702	sall1b	99	52.663	ENSSDUG00000006507	sall1a	99	51.887	Seriola_dumerili
ENSAMXG00000017702	sall1b	53	60.526	ENSSLDG00000014465	-	84	67.010	Seriola_lalandi_dorsalis
ENSAMXG00000017702	sall1b	99	52.168	ENSSLDG00000017721	sall1a	99	51.887	Seriola_lalandi_dorsalis
ENSAMXG00000017702	sall1b	97	52.443	ENSSARG00000000661	SALL1	99	52.067	Sorex_araneus
ENSAMXG00000017702	sall1b	99	53.144	ENSSPUG00000000156	SALL1	99	52.687	Sphenodon_punctatus
ENSAMXG00000017702	sall1b	99	52.846	ENSSPAG00000021615	sall1a	99	51.926	Stegastes_partitus
ENSAMXG00000017702	sall1b	99	50.702	ENSSSCG00000002836	SALL1	97	55.738	Sus_scrofa
ENSAMXG00000017702	sall1b	99	53.358	ENSTGUG00000007514	SALL1	99	52.867	Taeniopygia_guttata
ENSAMXG00000017702	sall1b	60	61.538	ENSTRUG00000008950	sall1a	93	61.538	Takifugu_rubripes
ENSAMXG00000017702	sall1b	92	50.515	ENSTNIG00000004257	sall1a	100	50.526	Tetraodon_nigroviridis
ENSAMXG00000017702	sall1b	61	63.265	ENSTBEG00000002119	-	52	63.265	Tupaia_belangeri
ENSAMXG00000017702	sall1b	92	63.462	ENSUAMG00000023379	-	92	63.462	Ursus_americanus
ENSAMXG00000017702	sall1b	90	63.462	ENSVVUG00000019383	-	99	63.462	Vulpes_vulpes
ENSAMXG00000017702	sall1b	98	33.869	ENSXETG00000017176	sall2	99	33.333	Xenopus_tropicalis
ENSAMXG00000017702	sall1b	99	50.218	ENSXETG00000018417	sall1	99	50.109	Xenopus_tropicalis
ENSAMXG00000017702	sall1b	99	53.010	ENSXMAG00000016273	sall1a	99	52.741	Xiphophorus_maculatus