EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000017963 (Gene tree)
Gene ID: 103035609
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6512 bases
Position: chr5:13666252-13672763
Accession: 103035609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018510	TRM13	PF05206.14	1.8e-88	1	1
ENSAMXP00000018510	zf-U11-48K	PF05253.12	5.1e-10	1	1
ENSAMXP00000018510	zf-TRM13_CCCH	PF11722.8	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018510	-	1559	XM_007240101	ENSAMXP00000018510	464 (aa)	XP_007240163	W5LF98

Gene Model

Click here to download ENSAMXG00000017963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000017963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000017963	trmt13	97	55.460	ENSG00000122435	TRMT13	96	54.676	Homo_sapiens
ENSAMXG00000017963	trmt13	98	52.087	ENSAPOG00000015131	trmt13	99	52.087	Acanthochromis_polyacanthus
ENSAMXG00000017963	trmt13	97	55.414	ENSAMEG00000008917	TRMT13	95	55.675	Ailuropoda_melanoleuca
ENSAMXG00000017963	trmt13	99	53.942	ENSACIG00000005804	trmt13	95	52.643	Amphilophus_citrinellus
ENSAMXG00000017963	trmt13	98	52.286	ENSAOCG00000023585	trmt13	99	52.087	Amphiprion_ocellaris
ENSAMXG00000017963	trmt13	98	52.079	ENSAPEG00000004025	trmt13	99	51.881	Amphiprion_percula
ENSAMXG00000017963	trmt13	98	54.927	ENSATEG00000006597	trmt13	97	54.927	Anabas_testudineus
ENSAMXG00000017963	trmt13	90	57.011	ENSAPLG00000014924	TRMT13	99	56.293	Anas_platyrhynchos
ENSAMXG00000017963	trmt13	99	55.252	ENSACAG00000003498	TRMT13	99	55.324	Anolis_carolinensis
ENSAMXG00000017963	trmt13	97	55.675	ENSANAG00000019525	TRMT13	95	55.246	Aotus_nancymaae
ENSAMXG00000017963	trmt13	98	55.839	ENSACLG00000020018	trmt13	99	54.777	Astatotilapia_calliptera
ENSAMXG00000017963	trmt13	98	53.503	ENSBTAG00000015781	TRMT13	96	53.715	Bos_taurus
ENSAMXG00000017963	trmt13	97	55.246	ENSCJAG00000000200	TRMT13	91	66.667	Callithrix_jacchus
ENSAMXG00000017963	trmt13	65	52.366	ENSCAFG00000020021	TRMT13	96	51.911	Canis_familiaris
ENSAMXG00000017963	trmt13	56	61.004	ENSCAFG00020011572	TRMT13	90	61.004	Canis_lupus_dingo
ENSAMXG00000017963	trmt13	98	54.219	ENSCHIG00000015395	TRMT13	96	53.928	Capra_hircus
ENSAMXG00000017963	trmt13	98	53.404	ENSTSYG00000010811	TRMT13	93	60.638	Carlito_syrichta
ENSAMXG00000017963	trmt13	77	40.483	ENSCAPG00000009085	TRMT13	89	45.289	Cavia_aperea
ENSAMXG00000017963	trmt13	98	54.873	ENSCPOG00000000694	TRMT13	96	54.025	Cavia_porcellus
ENSAMXG00000017963	trmt13	97	55.246	ENSCCAG00000023772	TRMT13	95	54.818	Cebus_capucinus
ENSAMXG00000017963	trmt13	97	55.460	ENSCATG00000033556	TRMT13	95	55.032	Cercocebus_atys
ENSAMXG00000017963	trmt13	89	53.286	ENSCLAG00000008220	TRMT13	98	53.756	Chinchilla_lanigera
ENSAMXG00000017963	trmt13	97	55.460	ENSCSAG00000001506	TRMT13	95	55.032	Chlorocebus_sabaeus
ENSAMXG00000017963	trmt13	99	55.391	ENSCPBG00000026671	TRMT13	97	55.180	Chrysemys_picta_bellii
ENSAMXG00000017963	trmt13	97	55.460	ENSCANG00000034659	TRMT13	95	55.032	Colobus_angolensis_palliatus
ENSAMXG00000017963	trmt13	98	53.715	ENSCGRG00001021601	Trmt13	95	53.518	Cricetulus_griseus_chok1gshd
ENSAMXG00000017963	trmt13	52	48.649	ENSCGRG00000000093	-	96	48.249	Cricetulus_griseus_crigri
ENSAMXG00000017963	trmt13	98	53.965	ENSCSEG00000000591	trmt13	97	53.304	Cynoglossus_semilaevis
ENSAMXG00000017963	trmt13	98	52.708	ENSCVAG00000017342	trmt13	94	51.667	Cyprinodon_variegatus
ENSAMXG00000017963	trmt13	100	68.908	ENSDARG00000102846	trmt13	98	68.487	Danio_rerio
ENSAMXG00000017963	trmt13	59	58.123	ENSDNOG00000001710	TRMT13	84	58.123	Dasypus_novemcinctus
ENSAMXG00000017963	trmt13	98	53.846	ENSDORG00000015808	Trmt13	95	53.419	Dipodomys_ordii
ENSAMXG00000017963	trmt13	97	35.032	FBgn0037435	CG18048	94	35.032	Drosophila_melanogaster
ENSAMXG00000017963	trmt13	97	47.983	ENSETEG00000005819	TRMT13	96	47.983	Echinops_telfairi
ENSAMXG00000017963	trmt13	97	45.319	ENSEBUG00000014444	trmt13	96	45.532	Eptatretus_burgeri
ENSAMXG00000017963	trmt13	97	54.043	ENSEASG00005015918	TRMT13	95	53.961	Equus_asinus_asinus
ENSAMXG00000017963	trmt13	97	54.043	ENSECAG00000022626	TRMT13	95	53.961	Equus_caballus
ENSAMXG00000017963	trmt13	74	60.377	ENSEEUG00000000294	TRMT13	73	60.377	Erinaceus_europaeus
ENSAMXG00000017963	trmt13	99	63.202	ENSELUG00000003803	trmt13	99	61.885	Esox_lucius
ENSAMXG00000017963	trmt13	97	54.468	ENSFCAG00000030618	TRMT13	96	53.957	Felis_catus
ENSAMXG00000017963	trmt13	97	56.716	ENSFALG00000002424	TRMT13	95	56.103	Ficedula_albicollis
ENSAMXG00000017963	trmt13	98	55.342	ENSFDAG00000006342	TRMT13	95	54.915	Fukomys_damarensis
ENSAMXG00000017963	trmt13	77	56.728	ENSFHEG00000022954	trmt13	96	56.122	Fundulus_heteroclitus
ENSAMXG00000017963	trmt13	97	53.524	ENSGMOG00000013223	trmt13	100	53.744	Gadus_morhua
ENSAMXG00000017963	trmt13	97	55.172	ENSGALG00000005290	TRMT13	96	55.699	Gallus_gallus
ENSAMXG00000017963	trmt13	75	58.172	ENSGAFG00000001577	trmt13	81	58.172	Gambusia_affinis
ENSAMXG00000017963	trmt13	99	54.449	ENSGACG00000013428	trmt13	99	54.873	Gasterosteus_aculeatus
ENSAMXG00000017963	trmt13	98	55.626	ENSGAGG00000023303	TRMT13	96	63.534	Gopherus_agassizii
ENSAMXG00000017963	trmt13	97	55.032	ENSGGOG00000005616	TRMT13	95	54.604	Gorilla_gorilla
ENSAMXG00000017963	trmt13	98	56.263	ENSHBUG00000007754	trmt13	99	55.202	Haplochromis_burtoni
ENSAMXG00000017963	trmt13	98	55.342	ENSHGLG00000002164	TRMT13	95	54.701	Heterocephalus_glaber_female
ENSAMXG00000017963	trmt13	98	55.342	ENSHGLG00100001618	TRMT13	95	54.701	Heterocephalus_glaber_male
ENSAMXG00000017963	trmt13	97	49.559	ENSHCOG00000020553	trmt13	96	48.899	Hippocampus_comes
ENSAMXG00000017963	trmt13	99	74.946	ENSIPUG00000024787	trmt13	99	74.840	Ictalurus_punctatus
ENSAMXG00000017963	trmt13	98	54.777	ENSSTOG00000013483	TRMT13	96	54.701	Ictidomys_tridecemlineatus
ENSAMXG00000017963	trmt13	99	54.054	ENSJJAG00000018012	Trmt13	98	53.445	Jaculus_jaculus
ENSAMXG00000017963	trmt13	64	54.276	ENSKMAG00000007639	trmt13	92	53.289	Kryptolebias_marmoratus
ENSAMXG00000017963	trmt13	98	52.174	ENSLBEG00000020238	trmt13	99	52.720	Labrus_bergylta
ENSAMXG00000017963	trmt13	99	56.394	ENSLACG00000013153	TRMT13	99	55.556	Latimeria_chalumnae
ENSAMXG00000017963	trmt13	100	60.677	ENSLOCG00000000418	trmt13	99	60.632	Lepisosteus_oculatus
ENSAMXG00000017963	trmt13	77	52.688	ENSLAFG00000002383	TRMT13	98	52.688	Loxodonta_africana
ENSAMXG00000017963	trmt13	97	55.032	ENSMFAG00000034681	TRMT13	83	66.667	Macaca_fascicularis
ENSAMXG00000017963	trmt13	97	55.032	ENSMMUG00000004243	TRMT13	83	66.667	Macaca_mulatta
ENSAMXG00000017963	trmt13	97	55.032	ENSMNEG00000036102	TRMT13	83	66.667	Macaca_nemestrina
ENSAMXG00000017963	trmt13	97	55.675	ENSMLEG00000034258	TRMT13	95	55.246	Mandrillus_leucophaeus
ENSAMXG00000017963	trmt13	97	54.701	ENSMAMG00000016597	trmt13	96	54.060	Mastacembelus_armatus
ENSAMXG00000017963	trmt13	98	55.626	ENSMZEG00005020959	trmt13	99	54.565	Maylandia_zebra
ENSAMXG00000017963	trmt13	90	56.582	ENSMGAG00000006970	TRMT13	99	57.011	Meleagris_gallopavo
ENSAMXG00000017963	trmt13	98	54.237	ENSMAUG00000010448	Trmt13	96	53.617	Mesocricetus_auratus
ENSAMXG00000017963	trmt13	97	54.604	ENSMICG00000005283	TRMT13	95	54.390	Microcebus_murinus
ENSAMXG00000017963	trmt13	98	55.414	ENSMOCG00000019914	Trmt13	96	55.202	Microtus_ochrogaster
ENSAMXG00000017963	trmt13	56	51.311	ENSMMOG00000007762	trmt13	90	51.311	Mola_mola
ENSAMXG00000017963	trmt13	98	53.992	ENSMODG00000003646	TRMT13	96	52.521	Monodelphis_domestica
ENSAMXG00000017963	trmt13	99	53.780	ENSMALG00000020965	trmt13	98	53.564	Monopterus_albus
ENSAMXG00000017963	trmt13	99	54.603	MGP_CAROLIEiJ_G0025568	Trmt13	94	61.905	Mus_caroli
ENSAMXG00000017963	trmt13	99	54.812	ENSMUSG00000033439	Trmt13	94	61.905	Mus_musculus
ENSAMXG00000017963	trmt13	99	53.766	MGP_PahariEiJ_G0027014	Trmt13	93	60.241	Mus_pahari
ENSAMXG00000017963	trmt13	99	55.021	MGP_SPRETEiJ_G0026518	Trmt13	94	61.905	Mus_spretus
ENSAMXG00000017963	trmt13	77	52.830	ENSMPUG00000002078	-	95	51.752	Mustela_putorius_furo
ENSAMXG00000017963	trmt13	97	54.140	ENSMLUG00000002124	TRMT13	95	53.747	Myotis_lucifugus
ENSAMXG00000017963	trmt13	98	52.229	ENSNBRG00000006783	trmt13	97	51.168	Neolamprologus_brichardi
ENSAMXG00000017963	trmt13	97	55.032	ENSNLEG00000035917	TRMT13	83	66.667	Nomascus_leucogenys
ENSAMXG00000017963	trmt13	53	52.016	ENSMEUG00000013346	-	100	52.016	Notamacropus_eugenii
ENSAMXG00000017963	trmt13	64	67.500	ENSOPRG00000012048	TRMT13	62	67.500	Ochotona_princeps
ENSAMXG00000017963	trmt13	98	55.839	ENSONIG00000004574	trmt13	99	54.777	Oreochromis_niloticus
ENSAMXG00000017963	trmt13	89	55.269	ENSOANG00000012057	TRMT13	97	55.269	Ornithorhynchus_anatinus
ENSAMXG00000017963	trmt13	97	54.077	ENSOCUG00000023095	TRMT13	95	53.648	Oryctolagus_cuniculus
ENSAMXG00000017963	trmt13	98	51.702	ENSORLG00000003320	trmt13	98	50.851	Oryzias_latipes
ENSAMXG00000017963	trmt13	98	51.702	ENSORLG00020005972	trmt13	97	50.855	Oryzias_latipes_hni
ENSAMXG00000017963	trmt13	98	54.681	ENSORLG00015002270	trmt13	98	54.043	Oryzias_latipes_hsok
ENSAMXG00000017963	trmt13	99	54.352	ENSOMEG00000006724	trmt13	95	53.928	Oryzias_melastigma
ENSAMXG00000017963	trmt13	98	54.352	ENSOGAG00000005618	TRMT13	93	54.352	Otolemur_garnettii
ENSAMXG00000017963	trmt13	98	54.219	ENSOARG00000017983	TRMT13	96	53.928	Ovis_aries
ENSAMXG00000017963	trmt13	97	55.246	ENSPPAG00000043736	TRMT13	83	66.667	Pan_paniscus
ENSAMXG00000017963	trmt13	97	54.468	ENSPPRG00000003424	TRMT13	96	53.957	Panthera_pardus
ENSAMXG00000017963	trmt13	97	54.468	ENSPTIG00000018598	TRMT13	96	53.957	Panthera_tigris_altaica
ENSAMXG00000017963	trmt13	97	55.246	ENSPTRG00000001001	TRMT13	83	66.667	Pan_troglodytes
ENSAMXG00000017963	trmt13	97	55.460	ENSPANG00000007598	TRMT13	95	55.032	Papio_anubis
ENSAMXG00000017963	trmt13	98	63.100	ENSPKIG00000001514	trmt13	98	62.174	Paramormyrops_kingsleyae
ENSAMXG00000017963	trmt13	88	53.647	ENSPSIG00000012703	TRMT13	99	53.774	Pelodiscus_sinensis
ENSAMXG00000017963	trmt13	98	53.219	ENSPMGG00000013298	trmt13	95	51.907	Periophthalmus_magnuspinnatus
ENSAMXG00000017963	trmt13	97	55.437	ENSPEMG00000000275	Trmt13	95	55.032	Peromyscus_maniculatus_bairdii
ENSAMXG00000017963	trmt13	98	46.414	ENSPMAG00000000823	trmt13	98	46.822	Petromyzon_marinus
ENSAMXG00000017963	trmt13	99	53.027	ENSPCIG00000007699	TRMT13	98	52.401	Phascolarctos_cinereus
ENSAMXG00000017963	trmt13	97	54.084	ENSPFOG00000008675	trmt13	95	52.954	Poecilia_formosa
ENSAMXG00000017963	trmt13	98	54.077	ENSPLAG00000009709	trmt13	99	52.979	Poecilia_latipinna
ENSAMXG00000017963	trmt13	98	53.548	ENSPMEG00000022954	trmt13	99	53.092	Poecilia_mexicana
ENSAMXG00000017963	trmt13	75	58.726	ENSPREG00000005645	trmt13	92	56.786	Poecilia_reticulata
ENSAMXG00000017963	trmt13	97	55.388	ENSPPYG00000001120	TRMT13	95	54.957	Pongo_abelii
ENSAMXG00000017963	trmt13	97	53.503	ENSPCAG00000002340	TRMT13	95	53.291	Procavia_capensis
ENSAMXG00000017963	trmt13	97	54.604	ENSPCOG00000017984	TRMT13	95	54.255	Propithecus_coquereli
ENSAMXG00000017963	trmt13	97	53.863	ENSPVAG00000017430	TRMT13	95	53.648	Pteropus_vampyrus
ENSAMXG00000017963	trmt13	98	54.565	ENSPNYG00000013690	trmt13	99	53.503	Pundamilia_nyererei
ENSAMXG00000017963	trmt13	100	80.550	ENSPNAG00000022130	trmt13	100	79.915	Pygocentrus_nattereri
ENSAMXG00000017963	trmt13	98	55.485	ENSRNOG00000015140	Trmt13	93	54.352	Rattus_norvegicus
ENSAMXG00000017963	trmt13	97	55.460	ENSRBIG00000037686	TRMT13	95	55.032	Rhinopithecus_bieti
ENSAMXG00000017963	trmt13	97	55.460	ENSRROG00000044057	TRMT13	95	55.032	Rhinopithecus_roxellana
ENSAMXG00000017963	trmt13	97	55.675	ENSSBOG00000026541	TRMT13	95	55.246	Saimiri_boliviensis_boliviensis
ENSAMXG00000017963	trmt13	92	54.072	ENSSHAG00000005213	TRMT13	96	53.061	Sarcophilus_harrisii
ENSAMXG00000017963	trmt13	99	61.181	ENSSFOG00015017560	trmt13	99	61.229	Scleropages_formosus
ENSAMXG00000017963	trmt13	99	51.967	ENSSMAG00000014592	trmt13	97	51.346	Scophthalmus_maximus
ENSAMXG00000017963	trmt13	99	53.265	ENSSDUG00000015508	trmt13	97	53.265	Seriola_dumerili
ENSAMXG00000017963	trmt13	99	54.082	ENSSLDG00000019060	trmt13	98	53.673	Seriola_lalandi_dorsalis
ENSAMXG00000017963	trmt13	97	50.108	ENSSARG00000010344	TRMT13	96	50.108	Sorex_araneus
ENSAMXG00000017963	trmt13	96	55.435	ENSSPUG00000016339	TRMT13	98	55.000	Sphenodon_punctatus
ENSAMXG00000017963	trmt13	98	55.297	ENSSPAG00000011922	trmt13	98	54.873	Stegastes_partitus
ENSAMXG00000017963	trmt13	98	54.316	ENSSSCG00000006869	TRMT13	96	53.928	Sus_scrofa
ENSAMXG00000017963	trmt13	97	56.103	ENSTGUG00000005253	TRMT13	98	55.246	Taeniopygia_guttata
ENSAMXG00000017963	trmt13	98	52.381	ENSTRUG00000008400	trmt13	98	51.739	Takifugu_rubripes
ENSAMXG00000017963	trmt13	86	44.203	ENSTBEG00000008911	TRMT13	98	43.373	Tupaia_belangeri
ENSAMXG00000017963	trmt13	50	70.270	ENSTTRG00000015302	-	52	70.270	Tursiops_truncatus
ENSAMXG00000017963	trmt13	97	53.191	ENSUAMG00000017251	TRMT13	95	52.248	Ursus_americanus
ENSAMXG00000017963	trmt13	97	55.532	ENSUMAG00000007901	TRMT13	97	54.060	Ursus_maritimus
ENSAMXG00000017963	trmt13	78	68.966	ENSVPAG00000001034	TRMT13	85	67.797	Vicugna_pacos
ENSAMXG00000017963	trmt13	97	54.681	ENSVVUG00000021996	TRMT13	95	54.390	Vulpes_vulpes
ENSAMXG00000017963	trmt13	98	52.165	ENSXETG00000013204	trmt13	97	51.404	Xenopus_tropicalis
ENSAMXG00000017963	trmt13	98	54.077	ENSXMAG00000010765	trmt13	99	52.954	Xiphophorus_maculatus