EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000018028 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 8007 bases
Position: chr21:18359174-18367180
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018573	SpoU_methylase	PF00588.19	9.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018573	-	573	-	ENSAMXP00000018573	190 (aa)	-	W5LFG1

Gene Model

Click here to download ENSAMXG00000018028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018028's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018028	si:dkey-85a20.4	94	83.425	ENSACIG00000020931	si:dkey-85a20.4	100	83.425	Amphilophus_citrinellus
ENSAMXG00000018028	si:dkey-85a20.4	95	84.783	ENSAOCG00000009950	si:dkey-85a20.4	100	84.783	Amphiprion_ocellaris
ENSAMXG00000018028	si:dkey-85a20.4	95	84.699	ENSAPEG00000012906	si:dkey-85a20.4	100	84.699	Amphiprion_percula
ENSAMXG00000018028	si:dkey-85a20.4	94	83.425	ENSACLG00000002018	si:dkey-85a20.4	100	83.425	Astatotilapia_calliptera
ENSAMXG00000018028	si:dkey-85a20.4	82	54.777	ENSCING00000006232	-	61	54.777	Ciona_intestinalis
ENSAMXG00000018028	si:dkey-85a20.4	82	83.226	ENSCVAG00000011124	-	100	83.226	Cyprinodon_variegatus
ENSAMXG00000018028	si:dkey-85a20.4	97	85.027	ENSDARG00000092550	si:dkey-85a20.4	98	85.027	Danio_rerio
ENSAMXG00000018028	si:dkey-85a20.4	95	82.418	ENSHCOG00000013439	si:dkey-85a20.4	100	82.418	Hippocampus_comes
ENSAMXG00000018028	si:dkey-85a20.4	84	87.500	ENSLBEG00000008830	-	100	87.500	Labrus_bergylta
ENSAMXG00000018028	si:dkey-85a20.4	97	67.742	MGP_CAROLIEiJ_G0031729	Tarbp1	57	67.742	Mus_caroli
ENSAMXG00000018028	si:dkey-85a20.4	94	82.873	ENSNBRG00000014368	si:dkey-85a20.4	100	82.873	Neolamprologus_brichardi
ENSAMXG00000018028	si:dkey-85a20.4	95	84.699	ENSOMEG00000001519	-	100	84.699	Oryzias_melastigma
ENSAMXG00000018028	si:dkey-85a20.4	95	82.514	ENSPMGG00000019801	si:dkey-85a20.4	100	82.514	Periophthalmus_magnuspinnatus
ENSAMXG00000018028	si:dkey-85a20.4	72	91.367	ENSPNAG00000019497	si:dkey-85a20.4	100	91.367	Pygocentrus_nattereri
ENSAMXG00000018028	si:dkey-85a20.4	83	87.500	ENSTRUG00000021368	si:dkey-85a20.4	100	87.500	Takifugu_rubripes