EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018108 (Gene tree)
Gene ID: -
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6321 bases
Position: chr14:38787973-38794293
Accession: ZDB-GENE-040426-1958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018657	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018657	-	420	-	ENSAMXP00000018657	139 (aa)	-	W5LFP5

Gene Model

Click here to download ENSAMXG00000018108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018108	sar1b	66	30.108	ENSAMXG00000012281	arl11	53	30.108
ENSAMXG00000018108	sar1b	64	37.079	ENSAMXG00000010445	arl8	50	37.079
ENSAMXG00000018108	sar1b	88	83.607	ENSAMXG00000012438	tysnd1	99	83.607
ENSAMXG00000018108	sar1b	75	33.654	ENSAMXG00000019845	arf1	57	33.654
ENSAMXG00000018108	sar1b	64	31.461	ENSAMXG00000043381	zgc:110197	52	31.461
ENSAMXG00000018108	sar1b	76	35.849	ENSAMXG00000021056	arl1	58	35.849
ENSAMXG00000018108	sar1b	76	34.286	ENSAMXG00000011499	arl2	57	34.286
ENSAMXG00000018108	sar1b	67	37.634	ENSAMXG00000038224	-	52	37.634
ENSAMXG00000018108	sar1b	64	31.461	ENSAMXG00000011059	arl5a	50	31.461
ENSAMXG00000018108	sar1b	71	34.951	ENSAMXG00000035742	arf2a	57	34.951
ENSAMXG00000018108	sar1b	76	36.937	ENSAMXG00000024926	arl4cb	55	36.937
ENSAMXG00000018108	sar1b	76	35.514	ENSAMXG00000035902	ARL6	58	35.514
ENSAMXG00000018108	sar1b	75	34.615	ENSAMXG00000019160	arl3l1	56	34.615
ENSAMXG00000018108	sar1b	67	35.484	ENSAMXG00000031467	arf4a	52	35.484
ENSAMXG00000018108	sar1b	83	92.241	ENSAMXG00000034192	-	80	92.105
ENSAMXG00000018108	sar1b	67	36.559	ENSAMXG00000004249	-	52	36.559
ENSAMXG00000018108	sar1b	76	32.075	ENSAMXG00000018516	arl3l2	57	32.075
ENSAMXG00000018108	sar1b	67	35.484	ENSAMXG00000037485	arf2b	53	35.484
ENSAMXG00000018108	sar1b	67	37.634	ENSAMXG00000031774	ARF5	52	37.634
ENSAMXG00000018108	sar1b	75	30.769	ENSAMXG00000031771	arl5c	57	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018108	sar1b	84	91.453	ENSAPOG00000017891	-	90	91.453	Acanthochromis_polyacanthus
ENSAMXG00000018108	sar1b	84	91.453	ENSAPOG00000007186	sar1b	59	91.453	Acanthochromis_polyacanthus
ENSAMXG00000018108	sar1b	84	91.453	ENSACIG00000013634	sar1b	59	91.453	Amphilophus_citrinellus
ENSAMXG00000018108	sar1b	84	89.744	ENSACIG00000024513	-	59	89.744	Amphilophus_citrinellus
ENSAMXG00000018108	sar1b	84	91.453	ENSAOCG00000002627	-	90	91.453	Amphiprion_ocellaris
ENSAMXG00000018108	sar1b	84	90.598	ENSAOCG00000005888	sar1b	59	90.598	Amphiprion_ocellaris
ENSAMXG00000018108	sar1b	84	90.598	ENSAPEG00000022771	sar1b	59	90.598	Amphiprion_percula
ENSAMXG00000018108	sar1b	84	92.308	ENSAPEG00000019680	-	88	92.308	Amphiprion_percula
ENSAMXG00000018108	sar1b	84	88.889	ENSATEG00000023368	-	59	88.889	Anabas_testudineus
ENSAMXG00000018108	sar1b	84	92.308	ENSATEG00000012904	sar1b	59	92.308	Anabas_testudineus
ENSAMXG00000018108	sar1b	84	90.598	ENSACAG00000001470	-	59	90.598	Anolis_carolinensis
ENSAMXG00000018108	sar1b	84	90.598	ENSACLG00000014649	sar1b	59	90.598	Astatotilapia_calliptera
ENSAMXG00000018108	sar1b	84	90.598	ENSACLG00000005011	-	59	90.598	Astatotilapia_calliptera
ENSAMXG00000018108	sar1b	84	82.906	ENSCSEG00000015238	sar1b	57	82.906	Cynoglossus_semilaevis
ENSAMXG00000018108	sar1b	84	90.598	ENSCSEG00000016976	-	59	90.598	Cynoglossus_semilaevis
ENSAMXG00000018108	sar1b	84	94.872	ENSCVAG00000022959	sar1b	59	94.872	Cyprinodon_variegatus
ENSAMXG00000018108	sar1b	84	98.291	ENSDARG00000103403	sar1b	59	98.291	Danio_rerio
ENSAMXG00000018108	sar1b	82	72.807	FBgn0038947	Sar1	57	72.807	Drosophila_melanogaster
ENSAMXG00000018108	sar1b	79	88.182	ENSEBUG00000011723	sar1b	56	88.182	Eptatretus_burgeri
ENSAMXG00000018108	sar1b	84	98.291	ENSELUG00000020912	sar1b	59	98.291	Esox_lucius
ENSAMXG00000018108	sar1b	84	94.017	ENSFHEG00000019865	sar1b	59	94.017	Fundulus_heteroclitus
ENSAMXG00000018108	sar1b	84	96.581	ENSGMOG00000008023	sar1b	59	96.581	Gadus_morhua
ENSAMXG00000018108	sar1b	84	91.453	ENSGAFG00000007081	sar1b	59	91.453	Gambusia_affinis
ENSAMXG00000018108	sar1b	84	89.744	ENSGACG00000001474	sar1b	59	89.744	Gasterosteus_aculeatus
ENSAMXG00000018108	sar1b	84	90.598	ENSHBUG00000000915	sar1b	59	90.598	Haplochromis_burtoni
ENSAMXG00000018108	sar1b	84	90.598	ENSHBUG00000018397	-	63	90.598	Haplochromis_burtoni
ENSAMXG00000018108	sar1b	83	94.828	ENSHCOG00000010953	sar1b	59	94.828	Hippocampus_comes
ENSAMXG00000018108	sar1b	84	96.581	ENSIPUG00000020925	sar1b	59	96.581	Ictalurus_punctatus
ENSAMXG00000018108	sar1b	95	84.091	ENSIPUG00000010046	sar1b	91	84.091	Ictalurus_punctatus
ENSAMXG00000018108	sar1b	83	91.379	ENSKMAG00000014875	-	89	91.379	Kryptolebias_marmoratus
ENSAMXG00000018108	sar1b	84	93.162	ENSKMAG00000019693	sar1b	59	93.162	Kryptolebias_marmoratus
ENSAMXG00000018108	sar1b	84	89.744	ENSLBEG00000027550	sar1b	59	89.744	Labrus_bergylta
ENSAMXG00000018108	sar1b	84	92.308	ENSLBEG00000016945	-	59	92.308	Labrus_bergylta
ENSAMXG00000018108	sar1b	84	87.179	ENSLACG00000010795	sar1b	59	87.179	Latimeria_chalumnae
ENSAMXG00000018108	sar1b	84	61.864	ENSLACG00000017029	-	59	61.864	Latimeria_chalumnae
ENSAMXG00000018108	sar1b	84	95.726	ENSLOCG00000005214	-	59	95.726	Lepisosteus_oculatus
ENSAMXG00000018108	sar1b	84	96.581	ENSLOCG00000010197	sar1b	59	96.581	Lepisosteus_oculatus
ENSAMXG00000018108	sar1b	84	89.744	ENSMAMG00000021732	sar1b	59	89.744	Mastacembelus_armatus
ENSAMXG00000018108	sar1b	84	90.598	ENSMZEG00005008942	sar1b	59	90.598	Maylandia_zebra
ENSAMXG00000018108	sar1b	84	90.598	ENSMZEG00005001012	-	59	90.598	Maylandia_zebra
ENSAMXG00000018108	sar1b	71	92.857	ENSMGAG00000005387	-	50	92.857	Meleagris_gallopavo
ENSAMXG00000018108	sar1b	84	89.744	ENSMMOG00000013803	-	59	89.744	Mola_mola
ENSAMXG00000018108	sar1b	84	93.162	ENSMALG00000016635	sar1b	54	93.162	Monopterus_albus
ENSAMXG00000018108	sar1b	84	90.598	ENSNBRG00000008013	sar1b	59	90.598	Neolamprologus_brichardi
ENSAMXG00000018108	sar1b	84	90.598	ENSNBRG00000014004	-	59	90.598	Neolamprologus_brichardi
ENSAMXG00000018108	sar1b	84	91.453	ENSONIG00000017278	sar1b	59	91.453	Oreochromis_niloticus
ENSAMXG00000018108	sar1b	84	93.162	ENSORLG00000000932	sar1b	59	93.162	Oryzias_latipes
ENSAMXG00000018108	sar1b	84	93.162	ENSORLG00020021985	sar1b	59	93.162	Oryzias_latipes_hni
ENSAMXG00000018108	sar1b	84	93.162	ENSORLG00015007044	sar1b	59	93.162	Oryzias_latipes_hsok
ENSAMXG00000018108	sar1b	84	92.308	ENSOMEG00000001052	sar1b	71	97.030	Oryzias_melastigma
ENSAMXG00000018108	sar1b	84	94.872	ENSPKIG00000010688	sar1b	59	94.872	Paramormyrops_kingsleyae
ENSAMXG00000018108	sar1b	84	95.726	ENSPKIG00000017353	-	89	95.652	Paramormyrops_kingsleyae
ENSAMXG00000018108	sar1b	83	93.966	ENSPMGG00000001234	sar1b	91	93.966	Periophthalmus_magnuspinnatus
ENSAMXG00000018108	sar1b	84	83.333	ENSPMAG00000003593	sar1b	60	83.333	Petromyzon_marinus
ENSAMXG00000018108	sar1b	84	90.598	ENSPFOG00000005666	sar1b	59	90.598	Poecilia_formosa
ENSAMXG00000018108	sar1b	85	90.678	ENSPLAG00000001016	-	90	79.856	Poecilia_latipinna
ENSAMXG00000018108	sar1b	85	91.525	ENSPLAG00000012223	sar1b	85	91.525	Poecilia_latipinna
ENSAMXG00000018108	sar1b	84	90.598	ENSPMEG00000016831	sar1b	88	90.351	Poecilia_mexicana
ENSAMXG00000018108	sar1b	88	88.525	ENSPREG00000002020	-	90	88.525	Poecilia_reticulata
ENSAMXG00000018108	sar1b	84	90.598	ENSPREG00000005312	sar1b	53	90.598	Poecilia_reticulata
ENSAMXG00000018108	sar1b	84	90.598	ENSPNYG00000012440	sar1b	59	90.598	Pundamilia_nyererei
ENSAMXG00000018108	sar1b	84	90.598	ENSPNYG00000021357	-	59	90.598	Pundamilia_nyererei
ENSAMXG00000018108	sar1b	84	92.308	ENSPNAG00000001123	-	59	92.308	Pygocentrus_nattereri
ENSAMXG00000018108	sar1b	84	99.145	ENSPNAG00000014683	sar1b	59	99.145	Pygocentrus_nattereri
ENSAMXG00000018108	sar1b	84	94.872	ENSSFOG00015018128	-	59	94.872	Scleropages_formosus
ENSAMXG00000018108	sar1b	85	97.458	ENSSFOG00015020051	sar1b	81	97.458	Scleropages_formosus
ENSAMXG00000018108	sar1b	84	89.744	ENSSMAG00000002165	-	59	89.744	Scophthalmus_maximus
ENSAMXG00000018108	sar1b	84	93.162	ENSSDUG00000020926	sar1b	94	93.966	Seriola_dumerili
ENSAMXG00000018108	sar1b	85	89.831	ENSSDUG00000019629	-	91	89.831	Seriola_dumerili
ENSAMXG00000018108	sar1b	84	93.162	ENSSLDG00000017052	sar1b	94	95.370	Seriola_lalandi_dorsalis
ENSAMXG00000018108	sar1b	84	90.598	ENSSLDG00000024197	-	59	90.598	Seriola_lalandi_dorsalis
ENSAMXG00000018108	sar1b	84	91.453	ENSSPUG00000010247	-	59	91.453	Sphenodon_punctatus
ENSAMXG00000018108	sar1b	84	91.453	ENSSPAG00000015626	-	59	91.453	Stegastes_partitus
ENSAMXG00000018108	sar1b	84	93.162	ENSSPAG00000017634	sar1b	59	93.162	Stegastes_partitus
ENSAMXG00000018108	sar1b	84	88.889	ENSTRUG00000023908	sar1b	59	88.889	Takifugu_rubripes
ENSAMXG00000018108	sar1b	84	87.179	ENSTNIG00000016097	sar1b	59	87.179	Tetraodon_nigroviridis
ENSAMXG00000018108	sar1b	83	89.565	ENSXCOG00000006154	-	77	89.565	Xiphophorus_couchianus
ENSAMXG00000018108	sar1b	84	91.453	ENSXMAG00000008294	sar1b	86	91.228	Xiphophorus_maculatus