EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018141 (Gene tree)
Gene ID: 103028065
Gene Symbol: papola
Alias: papolb|si:ch211-199l3.6|wu:fc43b06|wu:fp01g10|zgc:109706
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14616 bases
Position: chr3:34285757-34300372
Accession: 103028065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039721	PAP_RNA-bind	PF04926.15	3.9e-25	1	1
ENSAMXP00000018686	PAP_RNA-bind	PF04926.15	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040404	-	1671	-	ENSAMXP00000039721	556 (aa)	-	-
ENSAMXT00000018686	-	2328	XM_007255423	ENSAMXP00000018686	694 (aa)	XP_007255485	W5LFS4

Gene Model

Click here to download ENSAMXG00000018141's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018141	papola	98	72.043	ENSAMXG00000004611	papolg	72	73.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018141	papola	99	85.099	ENSG00000090060	PAPOLA	94	95.263	Homo_sapiens
ENSAMXG00000018141	papola	99	85.225	ENSAMEG00000014142	PAPOLA	99	70.946	Ailuropoda_melanoleuca
ENSAMXG00000018141	papola	97	86.296	ENSAPLG00000006645	PAPOLA	99	71.196	Anas_platyrhynchos
ENSAMXG00000018141	papola	96	86.194	ENSACAG00000013474	PAPOLA	91	79.669	Anolis_carolinensis
ENSAMXG00000018141	papola	96	80.669	ENSANAG00000027941	-	98	81.203	Aotus_nancymaae
ENSAMXG00000018141	papola	99	85.353	ENSANAG00000018274	PAPOLA	97	87.006	Aotus_nancymaae
ENSAMXG00000018141	papola	99	85.199	ENSBTAG00000004054	PAPOLA	100	73.391	Bos_taurus
ENSAMXG00000018141	papola	98	85.949	ENSCJAG00000006512	PAPOLA	97	86.817	Callithrix_jacchus
ENSAMXG00000018141	papola	98	85.507	ENSCAFG00000017783	PAPOLA	100	71.352	Canis_familiaris
ENSAMXG00000018141	papola	99	85.199	ENSCAFG00020011550	PAPOLA	94	87.572	Canis_lupus_dingo
ENSAMXG00000018141	papola	99	85.199	ENSCHIG00000025004	-	95	79.242	Capra_hircus
ENSAMXG00000018141	papola	97	86.004	ENSTSYG00000012384	PAPOLA	98	73.699	Carlito_syrichta
ENSAMXG00000018141	papola	99	80.431	ENSCPOG00000002648	PAPOLA	100	69.814	Cavia_porcellus
ENSAMXG00000018141	papola	99	84.919	ENSCCAG00000025120	PAPOLA	96	86.981	Cebus_capucinus
ENSAMXG00000018141	papola	99	85.353	ENSCATG00000018815	PAPOLA	98	87.006	Cercocebus_atys
ENSAMXG00000018141	papola	99	85.099	ENSCLAG00000016342	PAPOLA	100	73.534	Chinchilla_lanigera
ENSAMXG00000018141	papola	99	84.919	ENSCSAG00000010516	PAPOLA	100	70.761	Chlorocebus_sabaeus
ENSAMXG00000018141	papola	70	67.879	ENSCHOG00000001115	PAPOLA	72	67.879	Choloepus_hoffmanni
ENSAMXG00000018141	papola	97	85.978	ENSCPBG00000024125	PAPOLA	100	71.120	Chrysemys_picta_bellii
ENSAMXG00000018141	papola	99	78.662	ENSCANG00000000159	PAPOLA	100	67.218	Colobus_angolensis_palliatus
ENSAMXG00000018141	papola	99	72.793	ENSCGRG00001002732	-	99	60.840	Cricetulus_griseus_chok1gshd
ENSAMXG00000018141	papola	99	78.623	ENSCGRG00001000229	-	97	73.476	Cricetulus_griseus_chok1gshd
ENSAMXG00000018141	papola	99	85.225	ENSCGRG00001022693	-	100	73.314	Cricetulus_griseus_chok1gshd
ENSAMXG00000018141	papola	99	85.225	ENSCGRG00000003664	-	99	73.654	Cricetulus_griseus_crigri
ENSAMXG00000018141	papola	96	73.048	ENSCGRG00000001888	-	96	62.113	Cricetulus_griseus_crigri
ENSAMXG00000018141	papola	99	73.732	ENSCGRG00000000257	-	100	64.448	Cricetulus_griseus_crigri
ENSAMXG00000018141	papola	87	54.132	ENSCSEG00000001841	-	71	54.132	Cynoglossus_semilaevis
ENSAMXG00000018141	papola	100	89.228	ENSDARG00000009585	papola	100	78.099	Danio_rerio
ENSAMXG00000018141	papola	52	86.207	ENSDORG00000013415	-	100	62.683	Dipodomys_ordii
ENSAMXG00000018141	papola	98	73.732	ENSETEG00000004889	PAPOLA	100	61.957	Echinops_telfairi
ENSAMXG00000018141	papola	96	89.533	ENSELUG00000018972	papola	100	73.052	Esox_lucius
ENSAMXG00000018141	papola	99	85.099	ENSFCAG00000006784	PAPOLA	100	73.391	Felis_catus
ENSAMXG00000018141	papola	97	86.085	ENSFALG00000002547	PAPOLA	98	68.511	Ficedula_albicollis
ENSAMXG00000018141	papola	98	85.507	ENSFDAG00000010370	PAPOLA	100	73.420	Fukomys_damarensis
ENSAMXG00000018141	papola	62	90.936	ENSGMOG00000010209	papola	100	69.829	Gadus_morhua
ENSAMXG00000018141	papola	97	86.322	ENSGALG00000033099	PAPOLA	100	71.274	Gallus_gallus
ENSAMXG00000018141	papola	86	55.208	ENSGACG00000006142	-	100	55.208	Gasterosteus_aculeatus
ENSAMXG00000018141	papola	95	87.121	ENSGAGG00000020500	PAPOLA	90	79.504	Gopherus_agassizii
ENSAMXG00000018141	papola	99	85.099	ENSGGOG00000006287	PAPOLA	96	80.675	Gorilla_gorilla
ENSAMXG00000018141	papola	97	75.416	ENSHGLG00000017457	-	93	70.578	Heterocephalus_glaber_female
ENSAMXG00000018141	papola	98	70.674	ENSHGLG00000007467	-	100	61.000	Heterocephalus_glaber_female
ENSAMXG00000018141	papola	99	85.379	ENSHGLG00000007909	-	100	73.534	Heterocephalus_glaber_female
ENSAMXG00000018141	papola	99	85.199	ENSHGLG00100017273	PAPOLA	100	73.391	Heterocephalus_glaber_male
ENSAMXG00000018141	papola	99	90.000	ENSIPUG00000005919	papola	100	85.072	Ictalurus_punctatus
ENSAMXG00000018141	papola	99	85.099	ENSSTOG00000011471	PAPOLA	100	73.391	Ictidomys_tridecemlineatus
ENSAMXG00000018141	papola	98	85.145	ENSJJAG00000024340	Papola	100	73.429	Jaculus_jaculus
ENSAMXG00000018141	papola	97	80.882	ENSLACG00000018136	PAPOLA	99	67.164	Latimeria_chalumnae
ENSAMXG00000018141	papola	99	78.686	ENSLOCG00000008632	papola	99	69.433	Lepisosteus_oculatus
ENSAMXG00000018141	papola	98	84.964	ENSLAFG00000000946	PAPOLA	99	71.545	Loxodonta_africana
ENSAMXG00000018141	papola	99	84.919	ENSMFAG00000001792	PAPOLA	97	87.006	Macaca_fascicularis
ENSAMXG00000018141	papola	99	85.353	ENSMMUG00000018610	PAPOLA	100	72.766	Macaca_mulatta
ENSAMXG00000018141	papola	99	85.353	ENSMNEG00000043747	PAPOLA	97	87.006	Macaca_nemestrina
ENSAMXG00000018141	papola	99	84.919	ENSMLEG00000032066	PAPOLA	100	72.390	Mandrillus_leucophaeus
ENSAMXG00000018141	papola	75	88.836	ENSMGAG00000013228	-	100	68.921	Meleagris_gallopavo
ENSAMXG00000018141	papola	99	84.740	ENSMAUG00000017178	Papola	100	73.219	Mesocricetus_auratus
ENSAMXG00000018141	papola	99	85.199	ENSMICG00000010347	PAPOLA	96	86.842	Microcebus_murinus
ENSAMXG00000018141	papola	99	84.838	ENSMOCG00000021670	Papola	100	73.429	Microtus_ochrogaster
ENSAMXG00000018141	papola	99	74.820	ENSMODG00000001969	-	99	63.939	Monodelphis_domestica
ENSAMXG00000018141	papola	99	84.353	ENSMODG00000012887	-	100	71.081	Monodelphis_domestica
ENSAMXG00000018141	papola	99	84.740	MGP_CAROLIEiJ_G0018093	Papola	100	73.257	Mus_caroli
ENSAMXG00000018141	papola	99	84.740	ENSMUSG00000021111	Papola	100	73.257	Mus_musculus
ENSAMXG00000018141	papola	99	84.740	MGP_PahariEiJ_G0029850	Papola	100	73.257	Mus_pahari
ENSAMXG00000018141	papola	99	84.740	MGP_SPRETEiJ_G0018943	Papola	100	73.429	Mus_spretus
ENSAMXG00000018141	papola	99	85.099	ENSMPUG00000003054	PAPOLA	100	71.795	Mustela_putorius_furo
ENSAMXG00000018141	papola	99	84.201	ENSMLUG00000010922	PAPOLA	100	70.850	Myotis_lucifugus
ENSAMXG00000018141	papola	96	86.567	ENSNGAG00000022172	Papola	100	73.429	Nannospalax_galili
ENSAMXG00000018141	papola	99	80.357	ENSNLEG00000000625	PAPOLA	100	69.602	Nomascus_leucogenys
ENSAMXG00000018141	papola	65	56.667	ENSMEUG00000007831	-	54	56.667	Notamacropus_eugenii
ENSAMXG00000018141	papola	96	80.899	ENSOPRG00000007625	PAPOLA	100	68.100	Ochotona_princeps
ENSAMXG00000018141	papola	87	55.187	ENSONIG00000001062	-	99	54.601	Oreochromis_niloticus
ENSAMXG00000018141	papola	99	84.810	ENSOANG00000013812	PAPOLA	99	72.818	Ornithorhynchus_anatinus
ENSAMXG00000018141	papola	98	82.459	ENSOCUG00000011531	PAPOLA	99	69.012	Oryctolagus_cuniculus
ENSAMXG00000018141	papola	99	85.099	ENSOGAG00000004611	PAPOLA	100	71.429	Otolemur_garnettii
ENSAMXG00000018141	papola	99	84.919	ENSOARG00000016579	-	100	71.102	Ovis_aries
ENSAMXG00000018141	papola	99	85.099	ENSPPAG00000030505	PAPOLA	97	83.865	Pan_paniscus
ENSAMXG00000018141	papola	99	85.099	ENSPPRG00000008616	PAPOLA	100	72.253	Panthera_pardus
ENSAMXG00000018141	papola	98	85.507	ENSPTIG00000018852	PAPOLA	99	72.138	Panthera_tigris_altaica
ENSAMXG00000018141	papola	99	85.099	ENSPTRG00000006704	PAPOLA	100	72.527	Pan_troglodytes
ENSAMXG00000018141	papola	99	85.353	ENSPANG00000025582	PAPOLA	97	87.006	Papio_anubis
ENSAMXG00000018141	papola	98	87.684	ENSPKIG00000014471	papola	100	73.735	Paramormyrops_kingsleyae
ENSAMXG00000018141	papola	97	85.978	ENSPSIG00000014157	PAPOLA	87	70.135	Pelodiscus_sinensis
ENSAMXG00000018141	papola	96	86.567	ENSPEMG00000000043	Papola	100	73.429	Peromyscus_maniculatus_bairdii
ENSAMXG00000018141	papola	99	84.353	ENSPCIG00000013234	PAPOLA	100	71.508	Phascolarctos_cinereus
ENSAMXG00000018141	papola	98	82.790	ENSPPYG00000006128	PAPOLA	100	68.717	Pongo_abelii
ENSAMXG00000018141	papola	84	86.170	ENSPCAG00000004199	PAPOLA	100	69.055	Procavia_capensis
ENSAMXG00000018141	papola	99	81.736	ENSPCOG00000022117	PAPOLA	95	82.486	Propithecus_coquereli
ENSAMXG00000018141	papola	99	84.560	ENSPVAG00000013925	PAPOLA	100	70.256	Pteropus_vampyrus
ENSAMXG00000018141	papola	97	95.733	ENSPNAG00000010467	papola	100	89.189	Pygocentrus_nattereri
ENSAMXG00000018141	papola	99	84.740	ENSRNOG00000004827	Papola	100	70.833	Rattus_norvegicus
ENSAMXG00000018141	papola	99	84.629	ENSRBIG00000038490	PAPOLA	97	86.252	Rhinopithecus_bieti
ENSAMXG00000018141	papola	99	84.919	ENSRROG00000025545	PAPOLA	100	72.390	Rhinopithecus_roxellana
ENSAMXG00000018141	papola	99	85.172	ENSSBOG00000024061	PAPOLA	97	86.817	Saimiri_boliviensis_boliviensis
ENSAMXG00000018141	papola	99	84.838	ENSSHAG00000015211	PAPOLA	99	72.049	Sarcophilus_harrisii
ENSAMXG00000018141	papola	99	87.748	ENSSFOG00015004431	papola	94	90.927	Scleropages_formosus
ENSAMXG00000018141	papola	100	46.799	ENSSDUG00000018247	-	74	57.315	Seriola_dumerili
ENSAMXG00000018141	papola	94	87.763	ENSSPUG00000005835	PAPOLA	100	70.715	Sphenodon_punctatus
ENSAMXG00000018141	papola	99	84.919	ENSSSCG00000002505	-	100	73.247	Sus_scrofa
ENSAMXG00000018141	papola	96	86.754	ENSTGUG00000012687	PAPOLA	99	71.293	Taeniopygia_guttata
ENSAMXG00000018141	papola	67	82.065	ENSTBEG00000000194	PAPOLA	71	82.065	Tupaia_belangeri
ENSAMXG00000018141	papola	92	78.947	ENSTTRG00000005717	PAPOLA	79	78.947	Tursiops_truncatus
ENSAMXG00000018141	papola	76	90.476	ENSUAMG00000025737	PAPOLA	98	90.476	Ursus_americanus
ENSAMXG00000018141	papola	98	85.246	ENSVPAG00000006464	PAPOLA	100	71.565	Vicugna_pacos
ENSAMXG00000018141	papola	99	85.099	ENSVVUG00000028340	PAPOLA	100	73.820	Vulpes_vulpes
ENSAMXG00000018141	papola	99	82.940	ENSXETG00000013949	papola	100	69.565	Xenopus_tropicalis