EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000018143 (Gene tree)
Gene ID: 103040818
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3543 bases
Position: chr5:14306784-14310326
Accession: 103040818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018689	Ribosomal_L37	PF08561.10	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018689	-	1513	XM_007240118	ENSAMXP00000018689	141 (aa)	XP_007240180	W5LFS7

Gene Model

Click here to download ENSAMXG00000018143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018143	mrpl54	77	55.856	ENSG00000183617	MRPL54	59	63.415	Homo_sapiens
ENSAMXG00000018143	mrpl54	92	62.308	ENSAPOG00000022643	mrpl54	59	74.390	Acanthochromis_polyacanthus
ENSAMXG00000018143	mrpl54	77	57.658	ENSAMEG00000005908	MRPL54	88	46.377	Ailuropoda_melanoleuca
ENSAMXG00000018143	mrpl54	62	76.136	ENSACIG00000006438	mrpl54	59	78.049	Amphilophus_citrinellus
ENSAMXG00000018143	mrpl54	58	75.610	ENSAOCG00000006430	mrpl54	59	75.610	Amphiprion_ocellaris
ENSAMXG00000018143	mrpl54	58	75.610	ENSAPEG00000023406	mrpl54	59	75.610	Amphiprion_percula
ENSAMXG00000018143	mrpl54	92	58.462	ENSATEG00000004969	mrpl54	59	76.543	Anabas_testudineus
ENSAMXG00000018143	mrpl54	76	53.271	ENSACAG00000017747	-	77	54.878	Anolis_carolinensis
ENSAMXG00000018143	mrpl54	77	61.261	ENSANAG00000028692	MRPL54	62	64.706	Aotus_nancymaae
ENSAMXG00000018143	mrpl54	62	80.682	ENSACLG00000001877	mrpl54	59	82.927	Astatotilapia_calliptera
ENSAMXG00000018143	mrpl54	77	55.752	ENSBTAG00000008396	MRPL54	59	64.634	Bos_taurus
ENSAMXG00000018143	mrpl54	54	41.250	WBGene00009128	mrpl-54	59	41.250	Caenorhabditis_elegans
ENSAMXG00000018143	mrpl54	77	60.360	ENSCJAG00000014998	MRPL54	62	63.529	Callithrix_jacchus
ENSAMXG00000018143	mrpl54	77	54.955	ENSCAFG00000019192	MRPL54	59	62.195	Canis_familiaris
ENSAMXG00000018143	mrpl54	77	54.955	ENSCAFG00020018333	MRPL54	59	62.195	Canis_lupus_dingo
ENSAMXG00000018143	mrpl54	74	56.075	ENSCHIG00000026538	MRPL54	59	64.634	Capra_hircus
ENSAMXG00000018143	mrpl54	67	57.895	ENSCAPG00000012166	MRPL54	89	62.353	Cavia_aperea
ENSAMXG00000018143	mrpl54	83	51.938	ENSCPOG00000031082	MRPL54	90	45.000	Cavia_porcellus
ENSAMXG00000018143	mrpl54	77	60.360	ENSCCAG00000000138	MRPL54	62	63.529	Cebus_capucinus
ENSAMXG00000018143	mrpl54	74	57.944	ENSCATG00000014066	MRPL54	59	62.195	Cercocebus_atys
ENSAMXG00000018143	mrpl54	77	55.046	ENSCLAG00000007908	MRPL54	61	60.976	Chinchilla_lanigera
ENSAMXG00000018143	mrpl54	74	57.944	ENSCSAG00000010950	MRPL54	59	62.195	Chlorocebus_sabaeus
ENSAMXG00000018143	mrpl54	71	34.000	ENSCING00000019896	-	56	37.500	Ciona_intestinalis
ENSAMXG00000018143	mrpl54	74	37.736	ENSCSAVG00000009604	-	58	38.095	Ciona_savignyi
ENSAMXG00000018143	mrpl54	74	58.879	ENSCANG00000027841	MRPL54	59	63.415	Colobus_angolensis_palliatus
ENSAMXG00000018143	mrpl54	77	55.856	ENSCGRG00001019482	Mrpl54	59	64.634	Cricetulus_griseus_chok1gshd
ENSAMXG00000018143	mrpl54	77	55.856	ENSCGRG00000010923	Mrpl54	59	64.634	Cricetulus_griseus_crigri
ENSAMXG00000018143	mrpl54	87	51.639	ENSCSEG00000019883	mrpl54	55	65.854	Cynoglossus_semilaevis
ENSAMXG00000018143	mrpl54	77	72.222	ENSCVAG00000002210	mrpl54	59	75.610	Cyprinodon_variegatus
ENSAMXG00000018143	mrpl54	91	63.281	ENSDARG00000071468	mrpl54	63	72.941	Danio_rerio
ENSAMXG00000018143	mrpl54	77	51.818	ENSDNOG00000007387	MRPL54	85	44.361	Dasypus_novemcinctus
ENSAMXG00000018143	mrpl54	62	62.500	ENSDORG00000005326	Mrpl54	63	64.286	Dipodomys_ordii
ENSAMXG00000018143	mrpl54	55	48.718	FBgn0034579	mRpL54	59	48.718	Drosophila_melanogaster
ENSAMXG00000018143	mrpl54	74	53.271	ENSETEG00000017500	MRPL54	61	59.756	Echinops_telfairi
ENSAMXG00000018143	mrpl54	67	45.745	ENSEBUG00000003179	mrpl54	67	47.436	Eptatretus_burgeri
ENSAMXG00000018143	mrpl54	77	55.455	ENSEASG00005022283	MRPL54	60	63.415	Equus_asinus_asinus
ENSAMXG00000018143	mrpl54	77	55.455	ENSECAG00000001515	MRPL54	60	63.415	Equus_caballus
ENSAMXG00000018143	mrpl54	82	61.739	ENSELUG00000022358	mrpl54	62	72.941	Esox_lucius
ENSAMXG00000018143	mrpl54	77	55.856	ENSFCAG00000007144	MRPL54	59	63.415	Felis_catus
ENSAMXG00000018143	mrpl54	69	60.825	ENSFALG00000011660	MRPL54	79	60.000	Ficedula_albicollis
ENSAMXG00000018143	mrpl54	82	52.991	ENSFDAG00000020803	MRPL54	59	60.976	Fukomys_damarensis
ENSAMXG00000018143	mrpl54	74	53.846	ENSGALG00000027611	MRPL54	68	59.756	Gallus_gallus
ENSAMXG00000018143	mrpl54	62	70.455	ENSGAFG00000016193	mrpl54	62	70.588	Gambusia_affinis
ENSAMXG00000018143	mrpl54	69	58.763	ENSGAGG00000020238	MRPL54	65	59.756	Gopherus_agassizii
ENSAMXG00000018143	mrpl54	77	55.856	ENSGGOG00000014722	MRPL54	59	63.415	Gorilla_gorilla
ENSAMXG00000018143	mrpl54	77	54.128	ENSHGLG00000006157	MRPL54	61	59.756	Heterocephalus_glaber_female
ENSAMXG00000018143	mrpl54	77	54.128	ENSHGLG00100000788	MRPL54	61	59.756	Heterocephalus_glaber_male
ENSAMXG00000018143	mrpl54	62	65.909	ENSHCOG00000000536	mrpl54	58	68.293	Hippocampus_comes
ENSAMXG00000018143	mrpl54	97	65.468	ENSIPUG00000024854	mrpl54	99	61.151	Ictalurus_punctatus
ENSAMXG00000018143	mrpl54	68	58.333	ENSSTOG00000022378	MRPL54	84	64.634	Ictidomys_tridecemlineatus
ENSAMXG00000018143	mrpl54	77	60.360	ENSJJAG00000020405	Mrpl54	59	65.854	Jaculus_jaculus
ENSAMXG00000018143	mrpl54	89	61.600	ENSKMAG00000022310	mrpl54	59	74.390	Kryptolebias_marmoratus
ENSAMXG00000018143	mrpl54	73	76.699	ENSLBEG00000005935	mrpl54	60	78.049	Labrus_bergylta
ENSAMXG00000018143	mrpl54	100	53.191	ENSLACG00000013912	MRPL54	63	64.706	Latimeria_chalumnae
ENSAMXG00000018143	mrpl54	62	70.455	ENSLOCG00000003860	mrpl54	62	70.588	Lepisosteus_oculatus
ENSAMXG00000018143	mrpl54	77	54.464	ENSLAFG00000029657	MRPL54	59	63.415	Loxodonta_africana
ENSAMXG00000018143	mrpl54	74	57.944	ENSMFAG00000003311	MRPL54	59	62.195	Macaca_fascicularis
ENSAMXG00000018143	mrpl54	74	57.944	ENSMMUG00000044080	MRPL54	59	62.195	Macaca_mulatta
ENSAMXG00000018143	mrpl54	74	57.944	ENSMNEG00000039499	MRPL54	59	62.195	Macaca_nemestrina
ENSAMXG00000018143	mrpl54	73	77.670	ENSMAMG00000003291	mrpl54	65	77.647	Mastacembelus_armatus
ENSAMXG00000018143	mrpl54	68	56.250	ENSMGAG00000000951	MRPL54	85	59.756	Meleagris_gallopavo
ENSAMXG00000018143	mrpl54	77	58.716	ENSMAUG00000009543	Mrpl54	61	65.854	Mesocricetus_auratus
ENSAMXG00000018143	mrpl54	58	59.756	ENSMICG00000034581	MRPL54	52	59.756	Microcebus_murinus
ENSAMXG00000018143	mrpl54	77	56.757	ENSMOCG00000017895	Mrpl54	59	65.854	Microtus_ochrogaster
ENSAMXG00000018143	mrpl54	68	73.958	ENSMMOG00000020370	mrpl54	66	75.610	Mola_mola
ENSAMXG00000018143	mrpl54	76	59.813	ENSMODG00000000602	MRPL54	60	65.854	Monodelphis_domestica
ENSAMXG00000018143	mrpl54	62	71.591	ENSMALG00000020280	mrpl54	59	74.390	Monopterus_albus
ENSAMXG00000018143	mrpl54	85	53.333	MGP_CAROLIEiJ_G0015629	Mrpl54	61	63.415	Mus_caroli
ENSAMXG00000018143	mrpl54	58	63.415	ENSMUSG00000034932	Mrpl54	61	63.415	Mus_musculus
ENSAMXG00000018143	mrpl54	85	54.167	MGP_PahariEiJ_G0031042	Mrpl54	60	64.634	Mus_pahari
ENSAMXG00000018143	mrpl54	85	53.333	MGP_SPRETEiJ_G0016447	Mrpl54	61	63.415	Mus_spretus
ENSAMXG00000018143	mrpl54	60	65.882	ENSMLUG00000010801	MRPL54	80	65.882	Myotis_lucifugus
ENSAMXG00000018143	mrpl54	77	53.571	ENSNGAG00000021044	Mrpl54	59	60.976	Nannospalax_galili
ENSAMXG00000018143	mrpl54	62	81.818	ENSNBRG00000000568	mrpl54	59	84.146	Neolamprologus_brichardi
ENSAMXG00000018143	mrpl54	76	58.879	ENSMEUG00000013033	MRPL54	61	64.198	Notamacropus_eugenii
ENSAMXG00000018143	mrpl54	100	48.592	ENSOPRG00000010035	-	61	60.976	Ochotona_princeps
ENSAMXG00000018143	mrpl54	74	55.140	ENSODEG00000013969	MRPL54	59	60.976	Octodon_degus
ENSAMXG00000018143	mrpl54	62	80.682	ENSONIG00000002312	mrpl54	53	82.927	Oreochromis_niloticus
ENSAMXG00000018143	mrpl54	68	69.792	ENSORLG00000016960	mrpl54	66	69.512	Oryzias_latipes
ENSAMXG00000018143	mrpl54	70	68.687	ENSORLG00020014934	mrpl54	79	70.732	Oryzias_latipes_hni
ENSAMXG00000018143	mrpl54	81	62.281	ENSORLG00015010788	mrpl54	64	70.732	Oryzias_latipes_hsok
ENSAMXG00000018143	mrpl54	62	73.864	ENSOMEG00000009005	mrpl54	59	76.829	Oryzias_melastigma
ENSAMXG00000018143	mrpl54	77	55.455	ENSOGAG00000026254	-	59	65.432	Otolemur_garnettii
ENSAMXG00000018143	mrpl54	77	55.856	ENSOGAG00000033519	-	59	65.854	Otolemur_garnettii
ENSAMXG00000018143	mrpl54	77	54.955	ENSPPAG00000042418	MRPL54	59	62.195	Pan_paniscus
ENSAMXG00000018143	mrpl54	77	56.881	ENSPPRG00000012325	MRPL54	62	64.634	Panthera_pardus
ENSAMXG00000018143	mrpl54	77	55.263	ENSPTIG00000017727	MRPL54	58	64.634	Panthera_tigris_altaica
ENSAMXG00000018143	mrpl54	77	54.955	ENSPTRG00000010276	MRPL54	59	62.195	Pan_troglodytes
ENSAMXG00000018143	mrpl54	74	57.944	ENSPANG00000033944	MRPL54	59	62.195	Papio_anubis
ENSAMXG00000018143	mrpl54	67	55.789	ENSPSIG00000013587	MRPL54	86	57.317	Pelodiscus_sinensis
ENSAMXG00000018143	mrpl54	91	55.814	ENSPMGG00000015972	mrpl54	54	69.512	Periophthalmus_magnuspinnatus
ENSAMXG00000018143	mrpl54	84	52.500	ENSPEMG00000022929	Mrpl54	59	64.634	Peromyscus_maniculatus_bairdii
ENSAMXG00000018143	mrpl54	80	52.542	ENSPCIG00000025383	MRPL54	60	60.976	Phascolarctos_cinereus
ENSAMXG00000018143	mrpl54	89	60.000	ENSPFOG00000007409	mrpl54	59	70.732	Poecilia_formosa
ENSAMXG00000018143	mrpl54	89	60.000	ENSPLAG00000001640	mrpl54	59	70.732	Poecilia_latipinna
ENSAMXG00000018143	mrpl54	89	60.000	ENSPLAG00000001633	mrpl54	59	70.732	Poecilia_latipinna
ENSAMXG00000018143	mrpl54	89	60.000	ENSPMEG00000021068	mrpl54	59	70.732	Poecilia_mexicana
ENSAMXG00000018143	mrpl54	89	60.000	ENSPMEG00000021078	mrpl54	59	70.732	Poecilia_mexicana
ENSAMXG00000018143	mrpl54	73	71.845	ENSPREG00000012425	mrpl54	59	71.951	Poecilia_reticulata
ENSAMXG00000018143	mrpl54	74	57.009	ENSPPYG00000009386	MRPL54	59	63.415	Pongo_abelii
ENSAMXG00000018143	mrpl54	77	54.955	ENSPCAG00000000690	MRPL54	59	60.976	Procavia_capensis
ENSAMXG00000018143	mrpl54	77	54.955	ENSPCOG00000027550	MRPL54	59	63.415	Propithecus_coquereli
ENSAMXG00000018143	mrpl54	100	67.376	ENSPNAG00000000077	mrpl54	100	66.667	Pygocentrus_nattereri
ENSAMXG00000018143	mrpl54	85	51.667	ENSRNOG00000020464	Mrpl54	61	60.976	Rattus_norvegicus
ENSAMXG00000018143	mrpl54	74	58.879	ENSRBIG00000027038	MRPL54	61	63.415	Rhinopithecus_bieti
ENSAMXG00000018143	mrpl54	74	58.879	ENSRROG00000018776	MRPL54	61	63.415	Rhinopithecus_roxellana
ENSAMXG00000018143	mrpl54	77	58.559	ENSSBOG00000028081	MRPL54	62	63.529	Saimiri_boliviensis_boliviensis
ENSAMXG00000018143	mrpl54	82	55.556	ENSSHAG00000002557	MRPL54	63	60.000	Sarcophilus_harrisii
ENSAMXG00000018143	mrpl54	76	69.159	ENSSFOG00015008073	mrpl54	61	70.588	Scleropages_formosus
ENSAMXG00000018143	mrpl54	92	55.385	ENSSMAG00000009226	mrpl54	59	71.951	Scophthalmus_maximus
ENSAMXG00000018143	mrpl54	92	62.308	ENSSDUG00000009545	mrpl54	60	78.049	Seriola_dumerili
ENSAMXG00000018143	mrpl54	92	63.077	ENSSLDG00000001781	mrpl54	60	79.268	Seriola_lalandi_dorsalis
ENSAMXG00000018143	mrpl54	72	59.804	ENSSPUG00000015361	MRPL54	62	64.634	Sphenodon_punctatus
ENSAMXG00000018143	mrpl54	92	56.923	ENSSPAG00000003775	-	60	71.084	Stegastes_partitus
ENSAMXG00000018143	mrpl54	92	56.923	ENSSPAG00000015601	mrpl54	60	71.084	Stegastes_partitus
ENSAMXG00000018143	mrpl54	80	53.043	ENSSSCG00000024242	MRPL54	59	63.415	Sus_scrofa
ENSAMXG00000018143	mrpl54	62	73.864	ENSTRUG00000004609	mrpl54	59	76.829	Takifugu_rubripes
ENSAMXG00000018143	mrpl54	62	68.182	ENSTNIG00000015468	mrpl54	59	70.732	Tetraodon_nigroviridis
ENSAMXG00000018143	mrpl54	74	57.143	ENSTTRG00000004410	MRPL54	61	63.415	Tursiops_truncatus
ENSAMXG00000018143	mrpl54	77	57.658	ENSUAMG00000021572	MRPL54	88	46.377	Ursus_americanus
ENSAMXG00000018143	mrpl54	77	58.559	ENSUMAG00000007416	MRPL54	88	46.377	Ursus_maritimus
ENSAMXG00000018143	mrpl54	77	54.955	ENSVVUG00000004420	MRPL54	59	62.195	Vulpes_vulpes
ENSAMXG00000018143	mrpl54	75	59.434	ENSXETG00000033250	MRPL54	64	60.000	Xenopus_tropicalis
ENSAMXG00000018143	mrpl54	62	70.455	ENSXMAG00000003500	mrpl54	59	73.171	Xiphophorus_maculatus