EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018364 (Gene tree)
Gene ID: 103044793
Gene Symbol: p4ha1a
Alias: si:ch211-146f4.5
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 21028 bases
Position: chr4:13479168-13500195
Accession: 103044793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018933	2OG-FeII_Oxy	PF03171.20	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018933	-	1731	XM_022669142	ENSAMXP00000018933	538 (aa)	XP_022524863	W5LGH1

Gene Model

Click here to download ENSAMXG00000018364's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00330	Arginine and proline metabolism	KEGG
amex01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018364's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018364	p4ha1a	99	75.696	ENSAMXG00000011123	p4ha1b	99	75.696
ENSAMXG00000018364	p4ha1a	99	39.665	ENSAMXG00000036173	si:ch73-68b22.2	100	39.665

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018364	p4ha1a	77	60.096	ENSAPOG00000008101	p4ha1a	85	60.096	Acanthochromis_polyacanthus
ENSAMXG00000018364	p4ha1a	99	75.094	ENSACIG00000014303	p4ha1a	99	75.655	Amphilophus_citrinellus
ENSAMXG00000018364	p4ha1a	99	77.467	ENSAOCG00000005514	-	99	77.467	Amphiprion_ocellaris
ENSAMXG00000018364	p4ha1a	99	68.529	ENSAOCG00000005531	p4ha1a	99	68.529	Amphiprion_ocellaris
ENSAMXG00000018364	p4ha1a	99	76.909	ENSAPEG00000010462	-	99	76.909	Amphiprion_percula
ENSAMXG00000018364	p4ha1a	96	74.423	ENSCSEG00000001857	-	98	74.497	Cynoglossus_semilaevis
ENSAMXG00000018364	p4ha1a	99	72.128	ENSCVAG00000020081	p4ha1a	99	72.128	Cyprinodon_variegatus
ENSAMXG00000018364	p4ha1a	96	86.233	ENSDARG00000033537	p4ha1a	99	84.502	Danio_rerio
ENSAMXG00000018364	p4ha1a	100	77.656	ENSELUG00000005174	p4ha1a	100	77.656	Esox_lucius
ENSAMXG00000018364	p4ha1a	99	79.182	ENSMAMG00000010119	p4ha1a	99	79.182	Mastacembelus_armatus
ENSAMXG00000018364	p4ha1a	100	71.614	ENSMMOG00000009210	-	98	71.614	Mola_mola
ENSAMXG00000018364	p4ha1a	99	75.556	ENSMALG00000013083	-	100	77.258	Monopterus_albus
ENSAMXG00000018364	p4ha1a	99	68.738	ENSORLG00000014906	-	94	68.738	Oryzias_latipes
ENSAMXG00000018364	p4ha1a	100	71.429	ENSORLG00020015227	-	97	71.429	Oryzias_latipes_hni
ENSAMXG00000018364	p4ha1a	100	71.058	ENSORLG00015012970	-	97	71.058	Oryzias_latipes_hsok
ENSAMXG00000018364	p4ha1a	99	72.201	ENSOMEG00000019702	-	99	72.201	Oryzias_melastigma
ENSAMXG00000018364	p4ha1a	99	81.391	ENSPKIG00000002519	p4ha1a	99	81.391	Paramormyrops_kingsleyae
ENSAMXG00000018364	p4ha1a	100	71.719	ENSPREG00000016136	p4ha1a	100	71.719	Poecilia_reticulata
ENSAMXG00000018364	p4ha1a	100	87.269	ENSPNAG00000025732	p4ha1a	100	88.007	Pygocentrus_nattereri
ENSAMXG00000018364	p4ha1a	99	80.891	ENSSFOG00015009731	p4ha1	99	81.296	Scleropages_formosus
ENSAMXG00000018364	p4ha1a	99	70.599	ENSTNIG00000003570	-	99	70.599	Tetraodon_nigroviridis