EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018368 (Gene tree)
Gene ID: 103033457
Gene Symbol: ern2
Alias: si:ch211-14k19.11
Full Name: endoplasmic reticulum to nucleus signaling 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 24223 bases
Position: chr12:23495989-23520211
Accession: 103033457
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018916	Ribonuc_2-5A	PF06479.12	1.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018916	-	2634	XM_007238133	ENSAMXP00000018916	877 (aa)	XP_007238195	W5LGF4
ENSAMXT00000039248	-	849	-	ENSAMXP00000034277	282 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000018368's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04140	Autophagy - animal	KEGG
amex04141	Protein processing in endoplasmic reticulum	KEGG
amex04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018368's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018368	ern2	95	70.750	ENSAMXG00000000944	ern1	84	70.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018368	ern2	98	83.250	ENSAPOG00000002325	ern2	90	83.250	Acanthochromis_polyacanthus
ENSAMXG00000018368	ern2	98	68.138	ENSACIG00000015500	ern2	97	68.495	Amphilophus_citrinellus
ENSAMXG00000018368	ern2	98	83.750	ENSAOCG00000001933	ern2	89	83.750	Amphiprion_ocellaris
ENSAMXG00000018368	ern2	98	84.000	ENSAPEG00000000821	ern2	89	84.000	Amphiprion_percula
ENSAMXG00000018368	ern2	96	83.750	ENSATEG00000008597	ern2	87	83.750	Anabas_testudineus
ENSAMXG00000018368	ern2	95	82.250	ENSACLG00000000966	ern2	87	82.250	Astatotilapia_calliptera
ENSAMXG00000018368	ern2	98	68.831	ENSCSEG00000020936	ern2	98	67.869	Cynoglossus_semilaevis
ENSAMXG00000018368	ern2	98	81.750	ENSCVAG00000015538	ern2	91	81.750	Cyprinodon_variegatus
ENSAMXG00000018368	ern2	98	85.082	ENSDARG00000058475	ern2	97	85.082	Danio_rerio
ENSAMXG00000018368	ern2	97	62.613	ENSELUG00000009350	ern2	96	62.838	Esox_lucius
ENSAMXG00000018368	ern2	95	83.081	ENSFHEG00000002578	ern2	86	83.081	Fundulus_heteroclitus
ENSAMXG00000018368	ern2	95	78.392	ENSGMOG00000006029	ern2	87	78.392	Gadus_morhua
ENSAMXG00000018368	ern2	99	67.089	ENSGACG00000016726	ern2	94	67.914	Gasterosteus_aculeatus
ENSAMXG00000018368	ern2	95	82.000	ENSHBUG00000019242	ern2	89	82.000	Haplochromis_burtoni
ENSAMXG00000018368	ern2	98	65.587	ENSHCOG00000020503	ern2	97	65.922	Hippocampus_comes
ENSAMXG00000018368	ern2	88	89.383	ENSIPUG00000001249	ern2	87	89.383	Ictalurus_punctatus
ENSAMXG00000018368	ern2	96	81.796	ENSKMAG00000007537	ern2	88	81.796	Kryptolebias_marmoratus
ENSAMXG00000018368	ern2	96	82.178	ENSLBEG00000005440	ern2	88	82.178	Labrus_bergylta
ENSAMXG00000018368	ern2	97	76.427	ENSLACG00000011540	ern2	87	76.617	Latimeria_chalumnae
ENSAMXG00000018368	ern2	95	82.000	ENSMAMG00000008619	ern2	88	82.000	Mastacembelus_armatus
ENSAMXG00000018368	ern2	95	82.250	ENSMZEG00005011884	ern2	87	82.250	Maylandia_zebra
ENSAMXG00000018368	ern2	98	70.241	ENSMMOG00000003643	ern2	97	70.241	Mola_mola
ENSAMXG00000018368	ern2	95	81.750	ENSMALG00000002568	ern2	87	81.750	Monopterus_albus
ENSAMXG00000018368	ern2	96	79.661	ENSONIG00000003276	ern2	89	79.661	Oreochromis_niloticus
ENSAMXG00000018368	ern2	95	81.500	ENSORLG00000008924	ERN2	89	81.500	Oryzias_latipes
ENSAMXG00000018368	ern2	98	69.043	ENSORLG00020012672	ern2	97	69.149	Oryzias_latipes_hni
ENSAMXG00000018368	ern2	98	68.797	ENSORLG00015011995	ern2	97	69.043	Oryzias_latipes_hsok
ENSAMXG00000018368	ern2	98	68.837	ENSOMEG00000022267	ern2	97	68.943	Oryzias_melastigma
ENSAMXG00000018368	ern2	95	82.915	ENSPKIG00000013181	ern2	94	71.225	Paramormyrops_kingsleyae
ENSAMXG00000018368	ern2	99	63.835	ENSPMGG00000016482	ern2	87	64.336	Periophthalmus_magnuspinnatus
ENSAMXG00000018368	ern2	88	80.529	ENSPFOG00000006600	-	90	80.529	Poecilia_formosa
ENSAMXG00000018368	ern2	66	67.530	ENSPLAG00000018226	-	97	70.172	Poecilia_latipinna
ENSAMXG00000018368	ern2	62	82.134	ENSPMEG00000004696	-	85	82.134	Poecilia_mexicana
ENSAMXG00000018368	ern2	95	82.500	ENSPNYG00000014961	ern2	87	82.500	Pundamilia_nyererei
ENSAMXG00000018368	ern2	98	93.873	ENSPNAG00000014531	ern2	91	93.873	Pygocentrus_nattereri
ENSAMXG00000018368	ern2	87	82.000	ENSSMAG00000021268	ern2	89	82.000	Scophthalmus_maximus
ENSAMXG00000018368	ern2	95	83.250	ENSSDUG00000016726	ern2	87	83.250	Seriola_dumerili
ENSAMXG00000018368	ern2	95	82.915	ENSSLDG00000022830	ern2	87	82.915	Seriola_lalandi_dorsalis
ENSAMXG00000018368	ern2	98	62.916	ENSSPAG00000013487	ern2	96	62.916	Stegastes_partitus
ENSAMXG00000018368	ern2	99	79.040	ENSTRUG00000011288	ern2	88	79.040	Takifugu_rubripes
ENSAMXG00000018368	ern2	95	69.925	ENSXETG00000010337	ern2	97	54.984	Xenopus_tropicalis
ENSAMXG00000018368	ern2	86	69.141	ENSXCOG00000009393	ern2	96	69.141	Xiphophorus_couchianus
ENSAMXG00000018368	ern2	95	81.886	ENSXMAG00000006362	-	87	81.886	Xiphophorus_maculatus