EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000018383 (Gene tree)
Gene ID: 103036897
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 21010 bases
Position: chr12:11376476-11397485
Accession: 103036897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018931	IF-2	PF11987.8	1.9e-18	1	1
ENSAMXP00000035323	IF-2	PF11987.8	2.7e-18	1	1
ENSAMXP00000035323	GTP_EFTU	PF00009.27	5e-32	1	1
ENSAMXP00000018931	GTP_EFTU	PF00009.27	1.2e-27	1	1
ENSAMXP00000035323	MMR_HSR1	PF01926.23	3.6e-07	1	1
ENSAMXP00000018931	MMR_HSR1	PF01926.23	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018931	-	3582	XM_007253113	ENSAMXP00000018931	1193 (aa)	XP_007253175	W5LGG9
ENSAMXT00000049868	-	3702	-	ENSAMXP00000035323	1233 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000018383's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018383	eif5b	74	83.708	ENSAPOG00000004375	eif5b	99	71.993	Acanthochromis_polyacanthus
ENSAMXG00000018383	eif5b	70	84.788	ENSACIG00000024324	eif5b	81	84.742	Amphilophus_citrinellus
ENSAMXG00000018383	eif5b	74	84.382	ENSAOCG00000018386	eif5b	99	73.488	Amphiprion_ocellaris
ENSAMXG00000018383	eif5b	50	93.522	ENSATEG00000011451	-	62	94.186	Anabas_testudineus
ENSAMXG00000018383	eif5b	82	81.508	ENSATEG00000006765	eif5b	97	73.454	Anabas_testudineus
ENSAMXG00000018383	eif5b	74	80.674	ENSATEG00000011259	eif5b	63	93.408	Anabas_testudineus
ENSAMXG00000018383	eif5b	97	69.244	ENSACAG00000008305	-	52	88.424	Anolis_carolinensis
ENSAMXG00000018383	eif5b	52	93.408	ENSACLG00000005530	eif5b	64	93.891	Astatotilapia_calliptera
ENSAMXG00000018383	eif5b	52	57.878	WBGene00021857	iffb-1	58	57.878	Caenorhabditis_elegans
ENSAMXG00000018383	eif5b	92	65.551	ENSCAPG00000014619	-	73	73.003	Cavia_aperea
ENSAMXG00000018383	eif5b	92	68.827	ENSCPOG00000011967	-	72	77.852	Cavia_porcellus
ENSAMXG00000018383	eif5b	57	63.623	ENSCHOG00000002137	-	55	80.645	Choloepus_hoffmanni
ENSAMXG00000018383	eif5b	51	64.286	ENSCSAVG00000008808	-	66	64.610	Ciona_savignyi
ENSAMXG00000018383	eif5b	52	91.801	ENSCSEG00000014153	eif5b	99	70.796	Cynoglossus_semilaevis
ENSAMXG00000018383	eif5b	99	76.954	ENSDARG00000016548	eif5b	96	77.393	Danio_rerio
ENSAMXG00000018383	eif5b	51	70.473	FBgn0026259	eIF5B	54	70.799	Drosophila_melanogaster
ENSAMXG00000018383	eif5b	62	89.984	ENSELUG00000001132	eif5b	92	89.984	Esox_lucius
ENSAMXG00000018383	eif5b	68	88.103	ENSGMOG00000002031	eif5b	72	73.991	Gadus_morhua
ENSAMXG00000018383	eif5b	82	76.488	ENSGACG00000010536	eif5b	85	90.821	Gasterosteus_aculeatus
ENSAMXG00000018383	eif5b	55	85.584	ENSGAGG00000022242	-	92	89.068	Gopherus_agassizii
ENSAMXG00000018383	eif5b	74	83.296	ENSHBUG00000023319	eif5b	95	93.408	Haplochromis_burtoni
ENSAMXG00000018383	eif5b	97	72.982	ENSHCOG00000002807	eif5b	83	78.235	Hippocampus_comes
ENSAMXG00000018383	eif5b	97	83.333	ENSIPUG00000020910	eif5b	100	82.179	Ictalurus_punctatus
ENSAMXG00000018383	eif5b	74	83.951	ENSKMAG00000004325	eif5b	99	72.622	Kryptolebias_marmoratus
ENSAMXG00000018383	eif5b	74	81.060	ENSLBEG00000027090	eif5b	81	80.113	Labrus_bergylta
ENSAMXG00000018383	eif5b	52	87.241	ENSLACG00000011688	eif5b	73	77.569	Latimeria_chalumnae
ENSAMXG00000018383	eif5b	97	74.196	ENSMAMG00000022568	eif5b	99	73.416	Mastacembelus_armatus
ENSAMXG00000018383	eif5b	74	83.408	ENSMZEG00005012696	eif5b	94	93.891	Maylandia_zebra
ENSAMXG00000018383	eif5b	89	69.126	ENSMODG00000001387	-	52	88.746	Monodelphis_domestica
ENSAMXG00000018383	eif5b	97	73.424	ENSMALG00000005862	eif5b	99	72.502	Monopterus_albus
ENSAMXG00000018383	eif5b	86	82.022	ENSNBRG00000021912	eif5b	99	69.880	Neolamprologus_brichardi
ENSAMXG00000018383	eif5b	80	88.112	ENSMEUG00000007080	-	62	88.462	Notamacropus_eugenii
ENSAMXG00000018383	eif5b	74	84.512	ENSONIG00000018749	eif5b	99	71.960	Oreochromis_niloticus
ENSAMXG00000018383	eif5b	89	71.377	ENSOCUG00000021154	-	73	79.599	Oryctolagus_cuniculus
ENSAMXG00000018383	eif5b	96	72.657	ENSORLG00000001525	eif5b	52	93.569	Oryzias_latipes
ENSAMXG00000018383	eif5b	96	71.993	ENSORLG00020005327	eif5b	82	81.325	Oryzias_latipes_hni
ENSAMXG00000018383	eif5b	96	71.835	ENSORLG00015008949	eif5b	82	81.124	Oryzias_latipes_hsok
ENSAMXG00000018383	eif5b	67	82.776	ENSOMEG00000016539	eif5b	79	93.569	Oryzias_melastigma
ENSAMXG00000018383	eif5b	97	73.232	ENSPKIG00000011133	eif5b	99	71.533	Paramormyrops_kingsleyae
ENSAMXG00000018383	eif5b	58	77.684	ENSPSIG00000014914	-	57	90.046	Pelodiscus_sinensis
ENSAMXG00000018383	eif5b	75	65.827	ENSPMAG00000004508	eif5b	52	76.688	Petromyzon_marinus
ENSAMXG00000018383	eif5b	61	85.927	ENSPFOG00000007543	eif5b	98	86.915	Poecilia_formosa
ENSAMXG00000018383	eif5b	97	75.000	ENSPLAG00000015913	eif5b	95	92.444	Poecilia_latipinna
ENSAMXG00000018383	eif5b	97	74.829	ENSPMEG00000006712	eif5b	99	72.930	Poecilia_mexicana
ENSAMXG00000018383	eif5b	66	71.910	ENSPCAG00000007829	-	60	81.672	Procavia_capensis
ENSAMXG00000018383	eif5b	88	68.595	ENSPCOG00000019508	-	99	87.419	Propithecus_coquereli
ENSAMXG00000018383	eif5b	78	86.842	ENSPVAG00000006592	-	57	86.517	Pteropus_vampyrus
ENSAMXG00000018383	eif5b	86	81.187	ENSPNYG00000021051	eif5b	63	93.891	Pundamilia_nyererei
ENSAMXG00000018383	eif5b	74	92.360	ENSPNAG00000023852	eif5b	99	85.210	Pygocentrus_nattereri
ENSAMXG00000018383	eif5b	97	75.827	ENSSFOG00015000594	eif5b	99	73.736	Scleropages_formosus
ENSAMXG00000018383	eif5b	71	79.529	ENSSMAG00000000045	eif5b	61	90.675	Scophthalmus_maximus
ENSAMXG00000018383	eif5b	70	83.825	ENSSDUG00000005847	eif5b	82	84.353	Seriola_dumerili
ENSAMXG00000018383	eif5b	70	83.825	ENSSLDG00000013738	eif5b	83	84.000	Seriola_lalandi_dorsalis
ENSAMXG00000018383	eif5b	78	88.424	ENSSPAG00000005335	eif5b	61	88.424	Stegastes_partitus
ENSAMXG00000018383	eif5b	68	78.398	ENSTRUG00000007772	eif5b	62	90.675	Takifugu_rubripes
ENSAMXG00000018383	eif5b	75	74.627	ENSTNIG00000006580	eif5b	95	78.218	Tetraodon_nigroviridis
ENSAMXG00000018383	eif5b	97	65.225	ENSXETG00000019377	eif5b	53	88.585	Xenopus_tropicalis
ENSAMXG00000018383	eif5b	74	80.248	ENSXCOG00000016681	eif5b	94	81.151	Xiphophorus_couchianus
ENSAMXG00000018383	eif5b	74	80.543	ENSXMAG00000001002	eif5b	94	81.448	Xiphophorus_maculatus