EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018399 (Gene tree)
Gene ID: 103029575
Gene Symbol: fam83c
Alias: im:7149063
Full Name: family with sequence similarity 83 member C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 20291 bases
Position: chrAPWO02002301.1:259992-280282
Accession: 103029575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000018951	FAM83	PF07894.12	3.6e-111	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000018951	-	2708	XM_007241297	ENSAMXP00000018951	597 (aa)	XP_007241359	W5LGI9

Gene Model

Click here to download ENSAMXG00000018399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018399	fam83c	51	49.359	ENSAMXG00000016523	FAM83A	70	49.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018399	fam83c	99	63.880	ENSACIG00000015685	fam83c	99	64.716	Amphilophus_citrinellus
ENSAMXG00000018399	fam83c	98	65.320	ENSAPEG00000023028	fam83c	99	65.825	Amphiprion_percula
ENSAMXG00000018399	fam83c	100	63.929	ENSATEG00000008410	fam83c	98	64.630	Anabas_testudineus
ENSAMXG00000018399	fam83c	54	77.419	ENSAPLG00000007684	FAM83C	63	77.419	Anas_platyrhynchos
ENSAMXG00000018399	fam83c	50	51.974	ENSACAG00000005517	FAM83C	81	52.492	Anolis_carolinensis
ENSAMXG00000018399	fam83c	99	62.375	ENSACLG00000013293	fam83c	99	63.211	Astatotilapia_calliptera
ENSAMXG00000018399	fam83c	71	35.650	ENSCPBG00000002041	FAM83C	59	33.649	Chrysemys_picta_bellii
ENSAMXG00000018399	fam83c	100	62.776	ENSCSEG00000017826	fam83c	99	63.249	Cynoglossus_semilaevis
ENSAMXG00000018399	fam83c	99	63.211	ENSCVAG00000010589	fam83c	99	63.712	Cyprinodon_variegatus
ENSAMXG00000018399	fam83c	99	67.496	ENSDARG00000075296	fam83c	99	67.496	Danio_rerio
ENSAMXG00000018399	fam83c	100	66.232	ENSELUG00000014439	fam83c	100	66.395	Esox_lucius
ENSAMXG00000018399	fam83c	61	43.396	ENSFALG00000012451	FAM83C	75	47.869	Ficedula_albicollis
ENSAMXG00000018399	fam83c	97	60.068	ENSFHEG00000017527	fam83c	98	60.781	Fundulus_heteroclitus
ENSAMXG00000018399	fam83c	51	71.429	ENSGMOG00000003558	fam83c	90	71.061	Gadus_morhua
ENSAMXG00000018399	fam83c	66	77.419	ENSGALG00000031906	FAM83C	54	77.419	Gallus_gallus
ENSAMXG00000018399	fam83c	54	61.538	ENSGACG00000000006	fam83c	95	61.834	Gasterosteus_aculeatus
ENSAMXG00000018399	fam83c	95	37.329	ENSGAGG00000011761	FAM83C	90	36.860	Gopherus_agassizii
ENSAMXG00000018399	fam83c	99	62.375	ENSHBUG00000009655	fam83c	99	63.211	Haplochromis_burtoni
ENSAMXG00000018399	fam83c	100	51.641	ENSHCOG00000014079	fam83c	100	51.355	Hippocampus_comes
ENSAMXG00000018399	fam83c	98	73.162	ENSIPUG00000002046	FAM83C	99	73.162	Ictalurus_punctatus
ENSAMXG00000018399	fam83c	100	62.843	ENSKMAG00000015504	fam83c	100	63.065	Kryptolebias_marmoratus
ENSAMXG00000018399	fam83c	99	64.975	ENSLBEG00000017799	fam83c	99	65.466	Labrus_bergylta
ENSAMXG00000018399	fam83c	80	60.053	ENSLACG00000005534	FAM83C	91	60.053	Latimeria_chalumnae
ENSAMXG00000018399	fam83c	100	62.582	ENSLOCG00000007724	fam83c	99	62.726	Lepisosteus_oculatus
ENSAMXG00000018399	fam83c	100	62.742	ENSMAMG00000010316	fam83c	100	63.710	Mastacembelus_armatus
ENSAMXG00000018399	fam83c	99	62.375	ENSMZEG00005009063	fam83c	99	63.211	Maylandia_zebra
ENSAMXG00000018399	fam83c	55	80.645	ENSMGAG00000001956	FAM83C	63	80.645	Meleagris_gallopavo
ENSAMXG00000018399	fam83c	72	58.901	ENSMMOG00000016277	fam83c	87	58.874	Mola_mola
ENSAMXG00000018399	fam83c	100	63.242	ENSMALG00000020114	fam83c	100	63.419	Monopterus_albus
ENSAMXG00000018399	fam83c	52	52.848	ENSMLUG00000004473	FAM83C	60	52.500	Myotis_lucifugus
ENSAMXG00000018399	fam83c	94	65.625	ENSMEUG00000007181	FAM83C	52	65.625	Notamacropus_eugenii
ENSAMXG00000018399	fam83c	99	58.667	ENSONIG00000018564	fam83c	100	58.124	Oreochromis_niloticus
ENSAMXG00000018399	fam83c	100	60.225	ENSORLG00000002950	fam83c	100	59.742	Oryzias_latipes
ENSAMXG00000018399	fam83c	100	60.386	ENSORLG00020001822	fam83c	100	59.903	Oryzias_latipes_hni
ENSAMXG00000018399	fam83c	100	60.484	ENSORLG00015019398	fam83c	100	60.000	Oryzias_latipes_hsok
ENSAMXG00000018399	fam83c	100	60.454	ENSOMEG00000003633	fam83c	100	60.454	Oryzias_melastigma
ENSAMXG00000018399	fam83c	100	63.712	ENSPKIG00000023250	fam83c	99	63.712	Paramormyrops_kingsleyae
ENSAMXG00000018399	fam83c	100	64.851	ENSPMGG00000003433	fam83c	100	65.347	Periophthalmus_magnuspinnatus
ENSAMXG00000018399	fam83c	100	62.848	ENSPFOG00000014676	fam83c	100	63.399	Poecilia_formosa
ENSAMXG00000018399	fam83c	100	61.014	ENSPLAG00000023095	fam83c	100	62.540	Poecilia_latipinna
ENSAMXG00000018399	fam83c	100	61.661	ENSPMEG00000012791	fam83c	100	62.802	Poecilia_mexicana
ENSAMXG00000018399	fam83c	98	61.969	ENSPREG00000021668	fam83c	99	62.712	Poecilia_reticulata
ENSAMXG00000018399	fam83c	99	56.594	ENSPNYG00000019386	fam83c	99	57.358	Pundamilia_nyererei
ENSAMXG00000018399	fam83c	100	83.471	ENSPNAG00000011432	fam83c	99	83.471	Pygocentrus_nattereri
ENSAMXG00000018399	fam83c	96	67.742	ENSSHAG00000018354	FAM83C	89	39.088	Sarcophilus_harrisii
ENSAMXG00000018399	fam83c	79	59.514	ENSSFOG00015004158	fam83c	96	59.514	Scleropages_formosus
ENSAMXG00000018399	fam83c	100	62.141	ENSSMAG00000005706	fam83c	100	62.620	Scophthalmus_maximus
ENSAMXG00000018399	fam83c	98	63.007	ENSSDUG00000017583	fam83c	99	64.020	Seriola_dumerili
ENSAMXG00000018399	fam83c	100	62.069	ENSSLDG00000011527	fam83c	100	62.813	Seriola_lalandi_dorsalis
ENSAMXG00000018399	fam83c	50	51.603	ENSSPUG00000012470	FAM83C	51	51.623	Sphenodon_punctatus
ENSAMXG00000018399	fam83c	100	65.550	ENSSPAG00000017752	fam83c	100	66.029	Stegastes_partitus
ENSAMXG00000018399	fam83c	59	76.536	ENSTNIG00000002833	fam83c	98	76.257	Tetraodon_nigroviridis
ENSAMXG00000018399	fam83c	53	55.000	ENSXETG00000019789	fam83c	81	55.911	Xenopus_tropicalis
ENSAMXG00000018399	fam83c	71	55.455	ENSXCOG00000017358	fam83c	89	56.532	Xiphophorus_couchianus
ENSAMXG00000018399	fam83c	100	60.766	ENSXMAG00000023922	fam83c	100	62.460	Xiphophorus_maculatus