EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018529 (Gene tree)
Gene ID: 103042719
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor RBM22-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 13277 bases
Position: chr8:6510014-6523290
Accession: 103042719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019080	RRM_1	PF00076.22	6.6e-11	1	1
ENSAMXP00000041799	RRM_1	PF00076.22	7.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042091	-	4949	XM_022672024	ENSAMXP00000041799	422 (aa)	XP_022527745	UPI000BBDDB91
ENSAMXT00000019080	-	1170	-	ENSAMXP00000019080	389 (aa)	-	W5LGW8

Gene Model

Click here to download ENSAMXG00000018529's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018529	-	99	85.412	ENSAMXG00000038080	rbm22	99	77.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018529	-	99	84.928	ENSG00000086589	RBM22	100	90.323	Homo_sapiens
ENSAMXG00000018529	-	100	86.682	ENSAPOG00000010338	rbm22	100	86.215	Acanthochromis_polyacanthus
ENSAMXG00000018529	-	99	84.928	ENSAMEG00000004544	RBM22	99	84.211	Ailuropoda_melanoleuca
ENSAMXG00000018529	-	100	79.080	ENSACIG00000016372	rbm22	100	78.161	Amphilophus_citrinellus
ENSAMXG00000018529	-	100	86.682	ENSAOCG00000007179	rbm22	100	86.215	Amphiprion_ocellaris
ENSAMXG00000018529	-	100	86.682	ENSAPEG00000016689	rbm22	100	86.215	Amphiprion_percula
ENSAMXG00000018529	-	100	85.012	ENSATEG00000008286	rbm22	100	84.778	Anabas_testudineus
ENSAMXG00000018529	-	97	82.082	ENSAPLG00000016408	RBM22	98	82.324	Anas_platyrhynchos
ENSAMXG00000018529	-	99	82.578	ENSACAG00000014750	RBM22	99	83.532	Anolis_carolinensis
ENSAMXG00000018529	-	91	77.807	ENSANAG00000019688	-	99	77.023	Aotus_nancymaae
ENSAMXG00000018529	-	99	84.689	ENSANAG00000033743	-	99	83.971	Aotus_nancymaae
ENSAMXG00000018529	-	100	85.480	ENSACLG00000008863	rbm22	100	85.246	Astatotilapia_calliptera
ENSAMXG00000018529	-	99	84.928	ENSBTAG00000030366	RBM22	99	84.211	Bos_taurus
ENSAMXG00000018529	-	83	57.622	WBGene00011722	rbm-22	96	52.525	Caenorhabditis_elegans
ENSAMXG00000018529	-	99	84.689	ENSCJAG00000020963	RBM22	99	83.971	Callithrix_jacchus
ENSAMXG00000018529	-	84	86.585	ENSCJAG00000013247	-	85	84.573	Callithrix_jacchus
ENSAMXG00000018529	-	99	84.524	ENSCAFG00000018082	RBM22	99	83.810	Canis_familiaris
ENSAMXG00000018529	-	99	84.928	ENSCAFG00020023671	RBM22	99	84.211	Canis_lupus_dingo
ENSAMXG00000018529	-	99	84.928	ENSCHIG00000015561	RBM22	99	84.211	Capra_hircus
ENSAMXG00000018529	-	87	73.098	ENSTSYG00000037586	-	99	73.098	Carlito_syrichta
ENSAMXG00000018529	-	99	84.928	ENSTSYG00000003939	-	99	84.211	Carlito_syrichta
ENSAMXG00000018529	-	91	81.395	ENSCAPG00000002598	RBM22	95	79.793	Cavia_aperea
ENSAMXG00000018529	-	99	84.928	ENSCPOG00000001946	RBM22	99	84.211	Cavia_porcellus
ENSAMXG00000018529	-	99	84.689	ENSCCAG00000033546	RBM22	99	83.971	Cebus_capucinus
ENSAMXG00000018529	-	99	84.928	ENSCATG00000042133	RBM22	99	84.211	Cercocebus_atys
ENSAMXG00000018529	-	99	68.075	ENSCLAG00000007106	-	99	68.571	Chinchilla_lanigera
ENSAMXG00000018529	-	99	62.201	ENSCLAG00000014221	-	93	64.833	Chinchilla_lanigera
ENSAMXG00000018529	-	99	84.928	ENSCLAG00000010842	-	99	84.211	Chinchilla_lanigera
ENSAMXG00000018529	-	93	86.224	ENSCSAG00000019006	-	92	86.777	Chlorocebus_sabaeus
ENSAMXG00000018529	-	76	87.879	ENSCHOG00000004192	-	100	87.879	Choloepus_hoffmanni
ENSAMXG00000018529	-	99	84.450	ENSCHOG00000001041	-	99	83.732	Choloepus_hoffmanni
ENSAMXG00000018529	-	99	83.971	ENSCHOG00000013522	-	99	83.254	Choloepus_hoffmanni
ENSAMXG00000018529	-	99	84.450	ENSCPBG00000010094	RBM22	99	83.732	Chrysemys_picta_bellii
ENSAMXG00000018529	-	98	61.520	ENSCING00000005843	zf(c3h)-12	99	61.520	Ciona_intestinalis
ENSAMXG00000018529	-	98	62.264	ENSCSAVG00000009145	-	99	61.085	Ciona_savignyi
ENSAMXG00000018529	-	99	84.928	ENSCANG00000025232	RBM22	99	84.211	Colobus_angolensis_palliatus
ENSAMXG00000018529	-	99	84.928	ENSCGRG00001015110	Rbm22	99	84.211	Cricetulus_griseus_chok1gshd
ENSAMXG00000018529	-	98	80.241	ENSCGRG00000011751	Rbm22	98	78.313	Cricetulus_griseus_crigri
ENSAMXG00000018529	-	99	85.511	ENSCSEG00000010790	rbm22	98	84.561	Cynoglossus_semilaevis
ENSAMXG00000018529	-	99	86.118	ENSCVAG00000010670	rbm22	99	84.235	Cyprinodon_variegatus
ENSAMXG00000018529	-	99	85.377	ENSDARG00000010238	rbm22	99	83.726	Danio_rerio
ENSAMXG00000018529	-	99	84.928	ENSDNOG00000011166	RBM22	99	84.211	Dasypus_novemcinctus
ENSAMXG00000018529	-	99	64.833	ENSDORG00000005329	Rbm22	99	64.115	Dipodomys_ordii
ENSAMXG00000018529	-	85	65.257	FBgn0037220	CG14641	78	65.257	Drosophila_melanogaster
ENSAMXG00000018529	-	91	87.234	ENSEBUG00000016742	-	98	87.234	Eptatretus_burgeri
ENSAMXG00000018529	-	99	84.928	ENSEASG00005002681	RBM22	99	84.211	Equus_asinus_asinus
ENSAMXG00000018529	-	96	89.024	ENSECAG00000014940	RBM22	78	86.777	Equus_caballus
ENSAMXG00000018529	-	99	83.493	ENSEEUG00000005638	-	99	82.775	Erinaceus_europaeus
ENSAMXG00000018529	-	99	68.421	ENSEEUG00000009778	-	99	67.703	Erinaceus_europaeus
ENSAMXG00000018529	-	100	87.310	ENSELUG00000001106	rbm22	100	86.294	Esox_lucius
ENSAMXG00000018529	-	99	84.928	ENSFCAG00000018845	RBM22	99	84.211	Felis_catus
ENSAMXG00000018529	-	99	84.928	ENSFALG00000008051	RBM22	99	84.211	Ficedula_albicollis
ENSAMXG00000018529	-	99	84.928	ENSFDAG00000020067	RBM22	99	84.211	Fukomys_damarensis
ENSAMXG00000018529	-	100	85.981	ENSFHEG00000014032	rbm22	100	84.346	Fundulus_heteroclitus
ENSAMXG00000018529	-	99	84.086	ENSGMOG00000010186	rbm22	100	82.898	Gadus_morhua
ENSAMXG00000018529	-	99	84.450	ENSGALG00000004555	RBM22	99	83.732	Gallus_gallus
ENSAMXG00000018529	-	99	85.681	ENSGAFG00000008621	rbm22	99	84.038	Gambusia_affinis
ENSAMXG00000018529	-	99	84.543	ENSGACG00000018027	rbm22	99	83.372	Gasterosteus_aculeatus
ENSAMXG00000018529	-	99	84.689	ENSGAGG00000024305	RBM22	99	83.971	Gopherus_agassizii
ENSAMXG00000018529	-	99	84.928	ENSGGOG00000012947	RBM22	99	84.211	Gorilla_gorilla
ENSAMXG00000018529	-	100	85.480	ENSHBUG00000002941	rbm22	100	85.246	Haplochromis_burtoni
ENSAMXG00000018529	-	99	84.928	ENSHGLG00000008488	RBM22	99	84.211	Heterocephalus_glaber_female
ENSAMXG00000018529	-	97	84.634	ENSHGLG00100006872	RBM22	98	83.902	Heterocephalus_glaber_male
ENSAMXG00000018529	-	86	87.293	ENSHCOG00000016334	rbm22	92	87.293	Hippocampus_comes
ENSAMXG00000018529	-	99	81.882	ENSIPUG00000019751	rbm22	99	82.824	Ictalurus_punctatus
ENSAMXG00000018529	-	99	70.813	ENSSTOG00000027197	RBM22	99	66.746	Ictidomys_tridecemlineatus
ENSAMXG00000018529	-	99	71.292	ENSSTOG00000029346	-	97	72.967	Ictidomys_tridecemlineatus
ENSAMXG00000018529	-	99	84.928	ENSJJAG00000009565	Rbm22	99	84.211	Jaculus_jaculus
ENSAMXG00000018529	-	100	85.514	ENSKMAG00000004354	rbm22	100	84.579	Kryptolebias_marmoratus
ENSAMXG00000018529	-	99	86.019	ENSLBEG00000027750	rbm22	94	85.861	Labrus_bergylta
ENSAMXG00000018529	-	99	86.588	ENSLOCG00000010989	rbm22	99	86.118	Lepisosteus_oculatus
ENSAMXG00000018529	-	99	84.928	ENSLAFG00000006638	RBM22	99	84.211	Loxodonta_africana
ENSAMXG00000018529	-	99	84.928	ENSMFAG00000004034	RBM22	99	84.211	Macaca_fascicularis
ENSAMXG00000018529	-	99	84.928	ENSMMUG00000020683	RBM22	99	84.211	Macaca_mulatta
ENSAMXG00000018529	-	99	84.928	ENSMNEG00000035500	RBM22	99	84.211	Macaca_nemestrina
ENSAMXG00000018529	-	99	84.928	ENSMLEG00000034825	RBM22	99	84.211	Mandrillus_leucophaeus
ENSAMXG00000018529	-	100	86.215	ENSMAMG00000007370	rbm22	100	84.579	Mastacembelus_armatus
ENSAMXG00000018529	-	100	85.480	ENSMZEG00005013001	rbm22	100	85.246	Maylandia_zebra
ENSAMXG00000018529	-	99	84.450	ENSMGAG00000006298	RBM22	99	83.732	Meleagris_gallopavo
ENSAMXG00000018529	-	99	84.928	ENSMAUG00000001133	Rbm22	99	84.211	Mesocricetus_auratus
ENSAMXG00000018529	-	99	84.928	ENSMICG00000033712	RBM22	99	84.211	Microcebus_murinus
ENSAMXG00000018529	-	99	78.708	ENSMOCG00000018311	Rbm22	99	77.990	Microtus_ochrogaster
ENSAMXG00000018529	-	100	85.280	ENSMMOG00000003192	rbm22	100	83.645	Mola_mola
ENSAMXG00000018529	-	99	83.971	ENSMODG00000009574	-	99	83.254	Monodelphis_domestica
ENSAMXG00000018529	-	99	77.619	ENSMODG00000006398	-	99	77.857	Monodelphis_domestica
ENSAMXG00000018529	-	100	85.981	ENSMALG00000013964	rbm22	100	84.346	Monopterus_albus
ENSAMXG00000018529	-	99	84.928	MGP_CAROLIEiJ_G0022307	Rbm22	99	84.211	Mus_caroli
ENSAMXG00000018529	-	99	84.928	ENSMUSG00000024604	Rbm22	99	84.211	Mus_musculus
ENSAMXG00000018529	-	99	84.928	MGP_PahariEiJ_G0019037	Rbm22	99	84.211	Mus_pahari
ENSAMXG00000018529	-	99	84.928	MGP_SPRETEiJ_G0023219	Rbm22	99	84.211	Mus_spretus
ENSAMXG00000018529	-	99	84.928	ENSMPUG00000013760	RBM22	99	84.211	Mustela_putorius_furo
ENSAMXG00000018529	-	99	84.928	ENSMLUG00000009040	RBM22	99	84.211	Myotis_lucifugus
ENSAMXG00000018529	-	99	83.493	ENSMLUG00000003461	-	99	82.775	Myotis_lucifugus
ENSAMXG00000018529	-	99	84.928	ENSNGAG00000018233	Rbm22	99	84.211	Nannospalax_galili
ENSAMXG00000018529	-	89	84.293	ENSNBRG00000010458	rbm22	96	84.031	Neolamprologus_brichardi
ENSAMXG00000018529	-	99	84.928	ENSNLEG00000010397	-	99	84.211	Nomascus_leucogenys
ENSAMXG00000018529	-	99	74.580	ENSMEUG00000009348	-	99	74.101	Notamacropus_eugenii
ENSAMXG00000018529	-	88	72.500	ENSMEUG00000001573	-	72	71.617	Notamacropus_eugenii
ENSAMXG00000018529	-	99	65.311	ENSOPRG00000016612	-	99	64.371	Ochotona_princeps
ENSAMXG00000018529	-	99	85.167	ENSOPRG00000008481	-	99	84.450	Ochotona_princeps
ENSAMXG00000018529	-	99	83.971	ENSODEG00000005016	RBM22	99	83.254	Octodon_degus
ENSAMXG00000018529	-	99	85.412	ENSONIG00000013049	rbm22	99	84.235	Oreochromis_niloticus
ENSAMXG00000018529	-	99	83.135	ENSOANG00000002314	RBM22	99	82.423	Ornithorhynchus_anatinus
ENSAMXG00000018529	-	99	84.928	ENSOCUG00000011532	RBM22	99	84.211	Oryctolagus_cuniculus
ENSAMXG00000018529	-	99	82.864	ENSORLG00000004975	rbm22	99	81.455	Oryzias_latipes
ENSAMXG00000018529	-	99	82.864	ENSORLG00020012969	rbm22	99	81.455	Oryzias_latipes_hni
ENSAMXG00000018529	-	99	82.864	ENSORLG00015022508	rbm22	99	81.455	Oryzias_latipes_hsok
ENSAMXG00000018529	-	99	83.333	ENSOMEG00000004904	rbm22	99	81.925	Oryzias_melastigma
ENSAMXG00000018529	-	99	81.862	ENSOGAG00000011086	RBM22	99	81.146	Otolemur_garnettii
ENSAMXG00000018529	-	99	83.095	ENSOARG00000007633	RBM22	99	82.381	Ovis_aries
ENSAMXG00000018529	-	99	84.928	ENSPPAG00000034432	RBM22	99	84.211	Pan_paniscus
ENSAMXG00000018529	-	99	84.928	ENSPPRG00000011577	RBM22	99	84.211	Panthera_pardus
ENSAMXG00000018529	-	99	84.928	ENSPTIG00000004453	RBM22	99	84.211	Panthera_tigris_altaica
ENSAMXG00000018529	-	99	84.928	ENSPTRG00000017423	RBM22	99	84.211	Pan_troglodytes
ENSAMXG00000018529	-	99	84.928	ENSPANG00000011297	RBM22	99	84.211	Papio_anubis
ENSAMXG00000018529	-	99	84.471	ENSPKIG00000010315	rbm22	99	84.000	Paramormyrops_kingsleyae
ENSAMXG00000018529	-	84	87.768	ENSPKIG00000019326	rbm22	83	84.254	Paramormyrops_kingsleyae
ENSAMXG00000018529	-	99	84.211	ENSPSIG00000012818	RBM22	99	83.493	Pelodiscus_sinensis
ENSAMXG00000018529	-	99	82.254	ENSPMGG00000017638	rbm22	100	82.578	Periophthalmus_magnuspinnatus
ENSAMXG00000018529	-	99	84.689	ENSPEMG00000001753	Rbm22	99	83.971	Peromyscus_maniculatus_bairdii
ENSAMXG00000018529	-	77	65.689	ENSPMAG00000007317	-	99	65.689	Petromyzon_marinus
ENSAMXG00000018529	-	99	72.488	ENSPCIG00000015088	RBM22	99	71.770	Phascolarctos_cinereus
ENSAMXG00000018529	-	99	85.412	ENSPFOG00000005625	rbm22	99	85.176	Poecilia_formosa
ENSAMXG00000018529	-	99	84.941	ENSPLAG00000006344	rbm22	99	84.706	Poecilia_latipinna
ENSAMXG00000018529	-	99	81.176	ENSPMEG00000007992	rbm22	99	83.846	Poecilia_mexicana
ENSAMXG00000018529	-	99	85.647	ENSPREG00000003546	rbm22	99	84.000	Poecilia_reticulata
ENSAMXG00000018529	-	99	84.928	ENSPPYG00000015955	RBM22	99	84.211	Pongo_abelii
ENSAMXG00000018529	-	86	72.055	ENSPCAG00000015091	RBM22	96	72.176	Procavia_capensis
ENSAMXG00000018529	-	99	84.928	ENSPVAG00000014231	RBM22	99	84.211	Pteropus_vampyrus
ENSAMXG00000018529	-	86	83.836	ENSPNYG00000000380	rbm22	95	84.022	Pundamilia_nyererei
ENSAMXG00000018529	-	99	85.882	ENSPNAG00000002687	rbm22	99	85.882	Pygocentrus_nattereri
ENSAMXG00000018529	-	100	93.602	ENSPNAG00000010001	-	100	93.602	Pygocentrus_nattereri
ENSAMXG00000018529	-	99	84.689	ENSRNOG00000019235	Rbm22	99	83.971	Rattus_norvegicus
ENSAMXG00000018529	-	99	84.928	ENSRBIG00000041683	RBM22	99	84.211	Rhinopithecus_bieti
ENSAMXG00000018529	-	99	84.928	ENSRROG00000041637	RBM22	99	84.211	Rhinopithecus_roxellana
ENSAMXG00000018529	-	99	84.450	ENSSBOG00000035400	-	99	83.732	Saimiri_boliviensis_boliviensis
ENSAMXG00000018529	-	99	83.732	ENSSHAG00000017734	-	99	83.014	Sarcophilus_harrisii
ENSAMXG00000018529	-	99	86.118	ENSSFOG00015014955	rbm22	99	85.647	Scleropages_formosus
ENSAMXG00000018529	-	99	84.397	ENSSFOG00015022259	rbm22	99	84.397	Scleropages_formosus
ENSAMXG00000018529	-	100	85.948	ENSSMAG00000002921	rbm22	100	85.714	Scophthalmus_maximus
ENSAMXG00000018529	-	100	86.682	ENSSDUG00000003846	rbm22	100	85.047	Seriola_dumerili
ENSAMXG00000018529	-	100	86.682	ENSSLDG00000003804	rbm22	100	85.047	Seriola_lalandi_dorsalis
ENSAMXG00000018529	-	99	82.339	ENSSPUG00000003986	RBM22	99	83.294	Sphenodon_punctatus
ENSAMXG00000018529	-	100	86.916	ENSSPAG00000000383	rbm22	100	86.449	Stegastes_partitus
ENSAMXG00000018529	-	99	84.123	ENSSSCG00000023231	RBM22	99	83.412	Sus_scrofa
ENSAMXG00000018529	-	99	84.928	ENSTGUG00000000850	RBM22	99	84.211	Taeniopygia_guttata
ENSAMXG00000018529	-	100	84.543	ENSTRUG00000004724	rbm22	100	83.372	Takifugu_rubripes
ENSAMXG00000018529	-	99	72.488	ENSTBEG00000005617	RBM22	99	71.770	Tupaia_belangeri
ENSAMXG00000018529	-	99	84.928	ENSTTRG00000012778	RBM22	99	84.211	Tursiops_truncatus
ENSAMXG00000018529	-	99	84.928	ENSUAMG00000025133	RBM22	99	84.211	Ursus_americanus
ENSAMXG00000018529	-	99	84.928	ENSUMAG00000003651	RBM22	99	84.211	Ursus_maritimus
ENSAMXG00000018529	-	99	84.928	ENSVVUG00000007193	RBM22	99	84.211	Vulpes_vulpes
ENSAMXG00000018529	-	99	80.861	ENSXETG00000020435	rbm22	99	80.861	Xenopus_tropicalis
ENSAMXG00000018529	-	99	81.176	ENSXCOG00000003316	rbm22	100	79.442	Xiphophorus_couchianus
ENSAMXG00000018529	-	99	85.882	ENSXMAG00000008681	rbm22	99	84.235	Xiphophorus_maculatus