EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018599 (Gene tree)
Gene ID: 103044225
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 14929 bases
Position: chrAPWO02000032.1:1418733-1433661
Accession: 103044225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	1	6
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	2	6
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	3	6
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	4	6
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	5	6
ENSAMXP00000019155	zf-C2H2	PF00096.26	1e-34	6	6
ENSAMXP00000019155	zf-met	PF12874.7	5.1e-25	1	5
ENSAMXP00000019155	zf-met	PF12874.7	5.1e-25	2	5
ENSAMXP00000019155	zf-met	PF12874.7	5.1e-25	3	5
ENSAMXP00000019155	zf-met	PF12874.7	5.1e-25	4	5
ENSAMXP00000019155	zf-met	PF12874.7	5.1e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019155	-	7139	XM_007244830	ENSAMXP00000019155	1308 (aa)	XP_007244892	W5LH43

Gene Model

Click here to download ENSAMXG00000018599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018599	sall1a	79	61.224	ENSAMXG00000035442	sall3b	100	63.462
ENSAMXG00000018599	sall1a	61	48.980	ENSAMXG00000040630	-	99	48.980
ENSAMXG00000018599	sall1a	52	46.296	ENSAMXG00000013492	-	98	46.774
ENSAMXG00000018599	sall1a	100	63.462	ENSAMXG00000011185	sall3a	99	63.462
ENSAMXG00000018599	sall1a	99	53.259	ENSAMXG00000017702	sall1b	99	53.778
ENSAMXG00000018599	sall1a	92	65.385	ENSAMXG00000001254	sall4	99	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018599	sall1a	99	68.834	ENSG00000103449	SALL1	100	68.836	Homo_sapiens
ENSAMXG00000018599	sall1a	100	81.583	ENSAPOG00000022764	sall1a	100	81.507	Acanthochromis_polyacanthus
ENSAMXG00000018599	sall1a	99	67.466	ENSAMEG00000006817	SALL1	100	68.764	Ailuropoda_melanoleuca
ENSAMXG00000018599	sall1a	100	81.326	ENSACIG00000004231	sall1a	100	80.945	Amphilophus_citrinellus
ENSAMXG00000018599	sall1a	100	81.659	ENSAOCG00000002800	sall1a	100	81.583	Amphiprion_ocellaris
ENSAMXG00000018599	sall1a	100	81.431	ENSAPEG00000010179	sall1a	100	81.355	Amphiprion_percula
ENSAMXG00000018599	sall1a	99	80.503	ENSATEG00000003006	sall1a	99	80.122	Anabas_testudineus
ENSAMXG00000018599	sall1a	100	70.420	ENSAPLG00000003356	SALL1	100	70.915	Anas_platyrhynchos
ENSAMXG00000018599	sall1a	99	68.778	ENSACAG00000014399	SALL1	97	68.703	Anolis_carolinensis
ENSAMXG00000018599	sall1a	99	69.058	ENSANAG00000027238	SALL1	99	69.380	Aotus_nancymaae
ENSAMXG00000018599	sall1a	100	80.488	ENSACLG00000017148	sall1a	100	80.030	Astatotilapia_calliptera
ENSAMXG00000018599	sall1a	99	67.592	ENSBTAG00000008544	SALL1	100	68.216	Bos_taurus
ENSAMXG00000018599	sall1a	99	69.283	ENSCJAG00000001740	SALL1	99	69.552	Callithrix_jacchus
ENSAMXG00000018599	sall1a	99	68.315	ENSCAFG00000009755	SALL1	100	68.741	Canis_familiaris
ENSAMXG00000018599	sall1a	99	68.315	ENSCAFG00020002842	SALL1	100	68.741	Canis_lupus_dingo
ENSAMXG00000018599	sall1a	100	67.464	ENSCHIG00000026074	SALL1	100	67.988	Capra_hircus
ENSAMXG00000018599	sall1a	99	69.917	ENSTSYG00000029464	SALL1	99	69.917	Carlito_syrichta
ENSAMXG00000018599	sall1a	98	68.955	ENSCPOG00000006564	SALL1	99	69.489	Cavia_porcellus
ENSAMXG00000018599	sall1a	99	67.114	ENSCCAG00000001639	SALL1	100	67.359	Cebus_capucinus
ENSAMXG00000018599	sall1a	99	69.208	ENSCATG00000004982	SALL1	100	69.776	Cercocebus_atys
ENSAMXG00000018599	sall1a	99	68.792	ENSCLAG00000006380	SALL1	99	69.162	Chinchilla_lanigera
ENSAMXG00000018599	sall1a	99	68.535	ENSCSAG00000005319	SALL1	100	68.783	Chlorocebus_sabaeus
ENSAMXG00000018599	sall1a	64	68.235	ENSCHOG00000000800	-	69	68.235	Choloepus_hoffmanni
ENSAMXG00000018599	sall1a	100	70.646	ENSCPBG00000015924	SALL1	100	70.968	Chrysemys_picta_bellii
ENSAMXG00000018599	sall1a	99	69.185	ENSCANG00000036664	SALL1	100	69.368	Colobus_angolensis_palliatus
ENSAMXG00000018599	sall1a	99	67.315	ENSCGRG00001023314	-	100	68.236	Cricetulus_griseus_chok1gshd
ENSAMXG00000018599	sall1a	98	67.429	ENSCGRG00000009496	Sall1	100	68.369	Cricetulus_griseus_crigri
ENSAMXG00000018599	sall1a	99	78.419	ENSCSEG00000009349	sall1a	99	79.119	Cynoglossus_semilaevis
ENSAMXG00000018599	sall1a	90	78.614	ENSCVAG00000020513	sall1a	99	78.186	Cyprinodon_variegatus
ENSAMXG00000018599	sall1a	100	84.563	ENSDARG00000074319	sall1a	100	84.563	Danio_rerio
ENSAMXG00000018599	sall1a	99	48.907	ENSDARG00000075891	sall1b	99	47.673	Danio_rerio
ENSAMXG00000018599	sall1a	99	67.876	ENSDNOG00000016413	SALL1	99	68.848	Dasypus_novemcinctus
ENSAMXG00000018599	sall1a	98	68.541	ENSETEG00000015150	SALL1	99	69.149	Echinops_telfairi
ENSAMXG00000018599	sall1a	59	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSAMXG00000018599	sall1a	65	42.411	ENSEBUG00000008798	SALL1	94	37.394	Eptatretus_burgeri
ENSAMXG00000018599	sall1a	99	68.342	ENSEASG00005014602	SALL1	100	69.334	Equus_asinus_asinus
ENSAMXG00000018599	sall1a	92	66.584	ENSECAG00000011334	SALL1	99	67.162	Equus_caballus
ENSAMXG00000018599	sall1a	98	68.413	ENSEEUG00000002014	SALL1	100	68.816	Erinaceus_europaeus
ENSAMXG00000018599	sall1a	100	76.631	ENSELUG00000006159	sall1a	100	76.774	Esox_lucius
ENSAMXG00000018599	sall1a	100	54.989	ENSELUG00000017774	-	100	54.607	Esox_lucius
ENSAMXG00000018599	sall1a	99	67.365	ENSFCAG00000024654	SALL1	100	68.493	Felis_catus
ENSAMXG00000018599	sall1a	100	70.615	ENSFALG00000000074	SALL1	100	70.915	Ficedula_albicollis
ENSAMXG00000018599	sall1a	100	80.061	ENSFHEG00000012579	sall1a	100	79.604	Fundulus_heteroclitus
ENSAMXG00000018599	sall1a	74	62.500	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSAMXG00000018599	sall1a	100	77.710	ENSGMOG00000006103	sall1a	100	77.559	Gadus_morhua
ENSAMXG00000018599	sall1a	97	41.035	ENSGMOG00000013383	-	99	41.159	Gadus_morhua
ENSAMXG00000018599	sall1a	100	70.443	ENSGALG00000039238	SALL1	100	70.818	Gallus_gallus
ENSAMXG00000018599	sall1a	100	80.243	ENSGAFG00000009964	sall1a	100	79.787	Gambusia_affinis
ENSAMXG00000018599	sall1a	99	79.665	ENSGACG00000016702	sall1a	99	79.665	Gasterosteus_aculeatus
ENSAMXG00000018599	sall1a	100	70.796	ENSGAGG00000013979	SALL1	100	71.268	Gopherus_agassizii
ENSAMXG00000018599	sall1a	99	68.909	ENSGGOG00000000663	SALL1	99	69.208	Gorilla_gorilla
ENSAMXG00000018599	sall1a	100	80.564	ENSHBUG00000022005	sall1a	100	80.107	Haplochromis_burtoni
ENSAMXG00000018599	sall1a	99	68.857	ENSHGLG00000004288	-	100	69.478	Heterocephalus_glaber_female
ENSAMXG00000018599	sall1a	99	68.857	ENSHGLG00100017496	SALL1	100	69.478	Heterocephalus_glaber_male
ENSAMXG00000018599	sall1a	100	76.795	ENSHCOG00000000974	sall1a	100	76.493	Hippocampus_comes
ENSAMXG00000018599	sall1a	99	50.871	ENSIPUG00000022928	sall1b	99	50.795	Ictalurus_punctatus
ENSAMXG00000018599	sall1a	100	90.298	ENSIPUG00000016265	SALL1	100	90.298	Ictalurus_punctatus
ENSAMXG00000018599	sall1a	99	67.881	ENSSTOG00000020885	SALL1	100	68.468	Ictidomys_tridecemlineatus
ENSAMXG00000018599	sall1a	100	80.441	ENSKMAG00000016681	sall1a	100	80.061	Kryptolebias_marmoratus
ENSAMXG00000018599	sall1a	98	78.911	ENSLBEG00000012207	sall1a	96	78.521	Labrus_bergylta
ENSAMXG00000018599	sall1a	100	69.497	ENSLACG00000003556	SALL1	100	69.670	Latimeria_chalumnae
ENSAMXG00000018599	sall1a	92	39.216	ENSLACG00000014018	-	93	38.866	Latimeria_chalumnae
ENSAMXG00000018599	sall1a	100	78.625	ENSLOCG00000007283	sall1b	100	78.539	Lepisosteus_oculatus
ENSAMXG00000018599	sall1a	98	68.921	ENSLAFG00000015251	SALL1	99	69.114	Loxodonta_africana
ENSAMXG00000018599	sall1a	99	69.357	ENSMFAG00000003298	SALL1	100	69.500	Macaca_fascicularis
ENSAMXG00000018599	sall1a	93	69.057	ENSMMUG00000017200	SALL1	100	69.373	Macaca_mulatta
ENSAMXG00000018599	sall1a	93	69.218	ENSMNEG00000034770	SALL1	100	69.163	Macaca_nemestrina
ENSAMXG00000018599	sall1a	99	69.357	ENSMLEG00000036406	SALL1	100	69.679	Mandrillus_leucophaeus
ENSAMXG00000018599	sall1a	99	81.507	ENSMAMG00000004164	sall1a	99	81.126	Mastacembelus_armatus
ENSAMXG00000018599	sall1a	100	80.488	ENSMZEG00005006479	sall1a	100	80.030	Maylandia_zebra
ENSAMXG00000018599	sall1a	98	70.489	ENSMGAG00000004704	SALL1	100	70.872	Meleagris_gallopavo
ENSAMXG00000018599	sall1a	99	67.090	ENSMAUG00000019093	Sall1	100	67.487	Mesocricetus_auratus
ENSAMXG00000018599	sall1a	100	68.909	ENSMICG00000036486	SALL1	100	69.110	Microcebus_murinus
ENSAMXG00000018599	sall1a	99	79.771	ENSMMOG00000016400	sall1a	99	79.376	Mola_mola
ENSAMXG00000018599	sall1a	99	69.745	ENSMODG00000013114	SALL1	99	69.806	Monodelphis_domestica
ENSAMXG00000018599	sall1a	99	80.883	ENSMALG00000013400	sall1a	99	80.579	Monopterus_albus
ENSAMXG00000018599	sall1a	99	67.015	MGP_CAROLIEiJ_G0031362	Sall1	100	67.382	Mus_caroli
ENSAMXG00000018599	sall1a	99	67.090	ENSMUSG00000031665	Sall1	100	67.456	Mus_musculus
ENSAMXG00000018599	sall1a	99	66.916	MGP_PahariEiJ_G0022961	Sall1	100	67.511	Mus_pahari
ENSAMXG00000018599	sall1a	99	67.164	MGP_SPRETEiJ_G0032480	Sall1	100	67.530	Mus_spretus
ENSAMXG00000018599	sall1a	98	68.012	ENSMPUG00000003265	SALL1	96	68.313	Mustela_putorius_furo
ENSAMXG00000018599	sall1a	98	66.261	ENSMLUG00000015541	SALL1	100	67.551	Myotis_lucifugus
ENSAMXG00000018599	sall1a	100	80.488	ENSNBRG00000009307	sall1a	100	80.030	Neolamprologus_brichardi
ENSAMXG00000018599	sall1a	98	63.338	ENSNLEG00000001008	SALL1	99	63.781	Nomascus_leucogenys
ENSAMXG00000018599	sall1a	99	70.045	ENSMEUG00000012206	SALL1	99	70.135	Notamacropus_eugenii
ENSAMXG00000018599	sall1a	80	74.151	ENSOPRG00000005645	SALL1	73	74.926	Ochotona_princeps
ENSAMXG00000018599	sall1a	99	68.811	ENSODEG00000003685	SALL1	100	69.283	Octodon_degus
ENSAMXG00000018599	sall1a	100	80.716	ENSONIG00000002831	sall1a	100	80.259	Oreochromis_niloticus
ENSAMXG00000018599	sall1a	89	78.400	ENSOANG00000013399	SALL1	95	79.339	Ornithorhynchus_anatinus
ENSAMXG00000018599	sall1a	100	79.985	ENSORLG00000013827	sall1a	100	80.269	Oryzias_latipes
ENSAMXG00000018599	sall1a	100	80.061	ENSORLG00020020570	sall1a	100	79.756	Oryzias_latipes_hni
ENSAMXG00000018599	sall1a	100	79.909	ENSORLG00015018830	sall1a	100	80.185	Oryzias_latipes_hsok
ENSAMXG00000018599	sall1a	100	80.289	ENSOMEG00000016043	sall1a	100	79.967	Oryzias_melastigma
ENSAMXG00000018599	sall1a	99	69.260	ENSOGAG00000027316	SALL1	100	69.242	Otolemur_garnettii
ENSAMXG00000018599	sall1a	100	63.847	ENSOARG00000017583	SALL1	100	64.371	Ovis_aries
ENSAMXG00000018599	sall1a	98	69.207	ENSPPAG00000035657	SALL1	99	69.512	Pan_paniscus
ENSAMXG00000018599	sall1a	99	50.415	ENSPPAG00000035136	-	99	51.584	Pan_paniscus
ENSAMXG00000018599	sall1a	99	67.216	ENSPPRG00000023283	SALL1	100	68.332	Panthera_pardus
ENSAMXG00000018599	sall1a	87	63.462	ENSPTIG00000013539	-	96	63.462	Panthera_tigris_altaica
ENSAMXG00000018599	sall1a	99	69.179	ENSPTRG00000008108	SALL1	99	69.294	Pan_troglodytes
ENSAMXG00000018599	sall1a	97	51.090	ENSPTRG00000045256	-	98	52.582	Pan_troglodytes
ENSAMXG00000018599	sall1a	99	69.283	ENSPANG00000024176	SALL1	100	69.604	Papio_anubis
ENSAMXG00000018599	sall1a	100	73.288	ENSPKIG00000022251	sall1a	100	73.439	Paramormyrops_kingsleyae
ENSAMXG00000018599	sall1a	100	71.797	ENSPKIG00000005383	-	100	71.873	Paramormyrops_kingsleyae
ENSAMXG00000018599	sall1a	100	70.743	ENSPSIG00000008582	SALL1	100	70.915	Pelodiscus_sinensis
ENSAMXG00000018599	sall1a	99	75.940	ENSPMGG00000021788	sall1a	99	75.489	Periophthalmus_magnuspinnatus
ENSAMXG00000018599	sall1a	99	69.820	ENSPCIG00000017840	SALL1	99	69.917	Phascolarctos_cinereus
ENSAMXG00000018599	sall1a	98	79.985	ENSPFOG00000015799	sall1a	96	79.521	Poecilia_formosa
ENSAMXG00000018599	sall1a	100	80.167	ENSPLAG00000022539	sall1a	100	79.711	Poecilia_latipinna
ENSAMXG00000018599	sall1a	100	80.395	ENSPMEG00000020894	sall1a	100	79.939	Poecilia_mexicana
ENSAMXG00000018599	sall1a	100	80.167	ENSPREG00000006802	sall1a	100	79.711	Poecilia_reticulata
ENSAMXG00000018599	sall1a	90	68.064	ENSPPYG00000007345	SALL1	96	68.285	Pongo_abelii
ENSAMXG00000018599	sall1a	85	69.923	ENSPCAG00000008162	SALL1	93	70.019	Procavia_capensis
ENSAMXG00000018599	sall1a	99	69.064	ENSPCOG00000028192	SALL1	100	69.185	Propithecus_coquereli
ENSAMXG00000018599	sall1a	66	71.644	ENSPVAG00000015374	SALL1	100	71.692	Pteropus_vampyrus
ENSAMXG00000018599	sall1a	100	80.564	ENSPNYG00000010865	sall1a	100	80.107	Pundamilia_nyererei
ENSAMXG00000018599	sall1a	100	92.366	ENSPNAG00000023644	sall1a	100	92.366	Pygocentrus_nattereri
ENSAMXG00000018599	sall1a	100	65.306	ENSPNAG00000028248	-	99	65.306	Pygocentrus_nattereri
ENSAMXG00000018599	sall1a	99	54.232	ENSPNAG00000007442	sall1b	99	54.410	Pygocentrus_nattereri
ENSAMXG00000018599	sall1a	99	68.042	ENSRNOG00000013907	Sall1	100	68.039	Rattus_norvegicus
ENSAMXG00000018599	sall1a	93	69.281	ENSRBIG00000015707	SALL1	100	69.548	Rhinopithecus_bieti
ENSAMXG00000018599	sall1a	98	69.625	ENSRROG00000035777	SALL1	100	69.398	Rhinopithecus_roxellana
ENSAMXG00000018599	sall1a	99	69.357	ENSSBOG00000032186	SALL1	99	69.507	Saimiri_boliviensis_boliviensis
ENSAMXG00000018599	sall1a	99	70.045	ENSSHAG00000009477	SALL1	99	70.045	Sarcophilus_harrisii
ENSAMXG00000018599	sall1a	100	73.775	ENSSFOG00015020020	sall1a	100	74.077	Scleropages_formosus
ENSAMXG00000018599	sall1a	98	73.421	ENSSFOG00015001590	sall1a	99	73.636	Scleropages_formosus
ENSAMXG00000018599	sall1a	99	80.731	ENSSMAG00000009160	sall1a	99	80.350	Scophthalmus_maximus
ENSAMXG00000018599	sall1a	99	81.950	ENSSDUG00000006507	sall1a	99	81.569	Seriola_dumerili
ENSAMXG00000018599	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSAMXG00000018599	sall1a	53	77.108	ENSSLDG00000014465	-	80	89.231	Seriola_lalandi_dorsalis
ENSAMXG00000018599	sall1a	99	81.950	ENSSLDG00000017721	sall1a	99	81.569	Seriola_lalandi_dorsalis
ENSAMXG00000018599	sall1a	98	67.735	ENSSARG00000000661	SALL1	100	68.750	Sorex_araneus
ENSAMXG00000018599	sall1a	100	70.120	ENSSPUG00000000156	SALL1	100	70.690	Sphenodon_punctatus
ENSAMXG00000018599	sall1a	100	81.825	ENSSPAG00000021615	sall1a	100	81.749	Stegastes_partitus
ENSAMXG00000018599	sall1a	99	68.287	ENSSSCG00000002836	SALL1	100	68.531	Sus_scrofa
ENSAMXG00000018599	sall1a	100	70.871	ENSTGUG00000007514	SALL1	100	71.171	Taeniopygia_guttata
ENSAMXG00000018599	sall1a	91	77.880	ENSTRUG00000008950	sall1a	100	77.462	Takifugu_rubripes
ENSAMXG00000018599	sall1a	92	77.824	ENSTNIG00000004257	sall1a	100	77.409	Tetraodon_nigroviridis
ENSAMXG00000018599	sall1a	61	74.150	ENSTBEG00000002119	-	53	78.231	Tupaia_belangeri
ENSAMXG00000018599	sall1a	90	67.311	ENSUAMG00000023379	-	92	67.977	Ursus_americanus
ENSAMXG00000018599	sall1a	90	67.617	ENSVVUG00000019383	-	99	68.144	Vulpes_vulpes
ENSAMXG00000018599	sall1a	97	35.199	ENSXETG00000017176	sall2	99	34.639	Xenopus_tropicalis
ENSAMXG00000018599	sall1a	100	65.396	ENSXETG00000018417	sall1	100	65.396	Xenopus_tropicalis
ENSAMXG00000018599	sall1a	100	80.243	ENSXMAG00000016273	sall1a	100	79.787	Xiphophorus_maculatus