EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018693 (Gene tree)
Gene ID: 103037491
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3052 bases
Position: chr9:37400005-37403056
Accession: 103037491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019246	RRM_1	PF00076.22	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019246	-	1121	XM_007248482	ENSAMXP00000019246	100 (aa)	XP_007248544	W5LHD4

Gene Model

Click here to download ENSAMXG00000018693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018693	slirp	66	36.364	ENSAMXG00000036838	-	54	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018693	slirp	88	53.409	ENSG00000119705	SLIRP	92	58.571	Homo_sapiens
ENSAMXG00000018693	slirp	98	65.306	ENSAPOG00000001298	slirp	98	65.306	Acanthochromis_polyacanthus
ENSAMXG00000018693	slirp	70	54.286	ENSAMEG00000003975	SLIRP	77	54.286	Ailuropoda_melanoleuca
ENSAMXG00000018693	slirp	96	60.417	ENSACIG00000023083	slirp	95	60.417	Amphilophus_citrinellus
ENSAMXG00000018693	slirp	96	63.542	ENSAOCG00000006342	slirp	97	63.542	Amphiprion_ocellaris
ENSAMXG00000018693	slirp	96	63.542	ENSAPEG00000015917	slirp	97	63.542	Amphiprion_percula
ENSAMXG00000018693	slirp	96	63.542	ENSAPEG00000015719	-	98	63.542	Amphiprion_percula
ENSAMXG00000018693	slirp	98	64.286	ENSATEG00000013525	slirp	98	64.286	Anabas_testudineus
ENSAMXG00000018693	slirp	78	55.128	ENSCJAG00000016946	SLIRP	72	56.716	Callithrix_jacchus
ENSAMXG00000018693	slirp	88	52.273	ENSCAFG00020015876	-	79	52.273	Canis_lupus_dingo
ENSAMXG00000018693	slirp	80	55.000	ENSCCAG00000030130	SLIRP	74	55.000	Cebus_capucinus
ENSAMXG00000018693	slirp	87	50.575	ENSCATG00000036327	SLIRP	72	59.701	Cercocebus_atys
ENSAMXG00000018693	slirp	87	51.724	ENSCSAG00000011736	SLIRP	80	51.724	Chlorocebus_sabaeus
ENSAMXG00000018693	slirp	81	56.790	ENSCPBG00000026327	SLIRP	82	56.790	Chrysemys_picta_bellii
ENSAMXG00000018693	slirp	67	59.701	ENSCANG00000032892	SLIRP	66	61.538	Colobus_angolensis_palliatus
ENSAMXG00000018693	slirp	87	45.977	ENSCGRG00001024068	Slirp	78	45.977	Cricetulus_griseus_chok1gshd
ENSAMXG00000018693	slirp	87	45.977	ENSCGRG00000017440	Slirp	78	45.977	Cricetulus_griseus_crigri
ENSAMXG00000018693	slirp	84	54.762	ENSCSEG00000015766	slirp	86	54.762	Cynoglossus_semilaevis
ENSAMXG00000018693	slirp	89	62.921	ENSCVAG00000012504	slirp	85	62.921	Cyprinodon_variegatus
ENSAMXG00000018693	slirp	92	63.043	ENSDARG00000097753	slirp	94	61.856	Danio_rerio
ENSAMXG00000018693	slirp	85	48.235	ENSDNOG00000007721	SLIRP	77	48.235	Dasypus_novemcinctus
ENSAMXG00000018693	slirp	88	51.136	ENSDORG00000012379	Slirp	79	51.136	Dipodomys_ordii
ENSAMXG00000018693	slirp	75	58.667	ENSETEG00000010345	SLIRP	69	58.667	Echinops_telfairi
ENSAMXG00000018693	slirp	88	56.818	ENSEASG00005020193	SLIRP	78	56.818	Equus_asinus_asinus
ENSAMXG00000018693	slirp	71	56.338	ENSEEUG00000007257	SLIRP	70	56.338	Erinaceus_europaeus
ENSAMXG00000018693	slirp	99	59.596	ENSELUG00000016800	slirp	98	59.596	Esox_lucius
ENSAMXG00000018693	slirp	65	61.538	ENSFCAG00000036326	SLIRP	66	61.538	Felis_catus
ENSAMXG00000018693	slirp	76	50.000	ENSFALG00000012583	SLIRP	77	47.561	Ficedula_albicollis
ENSAMXG00000018693	slirp	78	58.974	ENSFDAG00000008347	SLIRP	69	58.974	Fukomys_damarensis
ENSAMXG00000018693	slirp	76	63.158	ENSFHEG00000004709	slirp	83	63.158	Fundulus_heteroclitus
ENSAMXG00000018693	slirp	98	58.163	ENSGMOG00000016948	slirp	94	58.163	Gadus_morhua
ENSAMXG00000018693	slirp	84	48.837	ENSGALG00000031238	SLIRP	87	48.837	Gallus_gallus
ENSAMXG00000018693	slirp	98	59.184	ENSGAFG00000010998	slirp	98	59.184	Gambusia_affinis
ENSAMXG00000018693	slirp	82	60.976	ENSGACG00000020137	slirp	95	60.976	Gasterosteus_aculeatus
ENSAMXG00000018693	slirp	83	61.446	ENSGAGG00000009953	SLIRP	57	61.446	Gopherus_agassizii
ENSAMXG00000018693	slirp	88	53.409	ENSGGOG00000011059	-	80	53.409	Gorilla_gorilla
ENSAMXG00000018693	slirp	88	52.273	ENSHGLG00000018491	SLIRP	78	52.273	Heterocephalus_glaber_female
ENSAMXG00000018693	slirp	88	52.273	ENSHGLG00100014153	SLIRP	78	52.273	Heterocephalus_glaber_male
ENSAMXG00000018693	slirp	99	58.586	ENSHCOG00000006795	slirp	100	58.586	Hippocampus_comes
ENSAMXG00000018693	slirp	99	68.687	ENSIPUG00000010214	SLIRP	99	68.687	Ictalurus_punctatus
ENSAMXG00000018693	slirp	87	50.575	ENSSTOG00000034316	SLIRP	79	50.000	Ictidomys_tridecemlineatus
ENSAMXG00000018693	slirp	98	56.122	ENSKMAG00000002038	slirp	94	56.122	Kryptolebias_marmoratus
ENSAMXG00000018693	slirp	98	57.143	ENSLBEG00000007564	slirp	98	57.143	Labrus_bergylta
ENSAMXG00000018693	slirp	100	59.000	ENSLACG00000013434	SLIRP	96	59.000	Latimeria_chalumnae
ENSAMXG00000018693	slirp	87	52.874	ENSMFAG00000042960	SLIRP	80	52.874	Macaca_fascicularis
ENSAMXG00000018693	slirp	87	52.874	ENSMMUG00000029256	SLIRP	79	52.874	Macaca_mulatta
ENSAMXG00000018693	slirp	87	52.874	ENSMNEG00000028921	SLIRP	80	52.874	Macaca_nemestrina
ENSAMXG00000018693	slirp	65	61.538	ENSMLEG00000043644	SLIRP	66	61.538	Mandrillus_leucophaeus
ENSAMXG00000018693	slirp	96	65.625	ENSMZEG00005004617	slirp	97	65.625	Maylandia_zebra
ENSAMXG00000018693	slirp	87	48.276	ENSMAUG00000003857	Slirp	78	48.276	Mesocricetus_auratus
ENSAMXG00000018693	slirp	72	55.556	ENSMICG00000012080	SLIRP	67	55.556	Microcebus_murinus
ENSAMXG00000018693	slirp	88	50.000	ENSMOCG00000016019	Slirp	78	50.000	Microtus_ochrogaster
ENSAMXG00000018693	slirp	98	61.224	ENSMMOG00000018268	slirp	98	61.224	Mola_mola
ENSAMXG00000018693	slirp	69	60.870	ENSMODG00000005207	-	97	60.870	Monodelphis_domestica
ENSAMXG00000018693	slirp	98	55.102	ENSMALG00000012581	slirp	98	55.102	Monopterus_albus
ENSAMXG00000018693	slirp	87	49.425	MGP_CAROLIEiJ_G0017995	Slirp	81	49.425	Mus_caroli
ENSAMXG00000018693	slirp	87	49.425	ENSMUSG00000021040	Slirp	78	49.425	Mus_musculus
ENSAMXG00000018693	slirp	87	49.425	MGP_SPRETEiJ_G0018840	Slirp	78	49.425	Mus_spretus
ENSAMXG00000018693	slirp	88	55.682	ENSMLUG00000029544	-	79	55.682	Myotis_lucifugus
ENSAMXG00000018693	slirp	73	61.644	ENSMLUG00000024998	-	66	61.644	Myotis_lucifugus
ENSAMXG00000018693	slirp	88	48.864	ENSNGAG00000016363	Slirp	84	48.864	Nannospalax_galili
ENSAMXG00000018693	slirp	88	47.727	ENSNLEG00000027238	-	79	55.072	Nomascus_leucogenys
ENSAMXG00000018693	slirp	88	47.727	ENSNLEG00000032459	-	81	47.727	Nomascus_leucogenys
ENSAMXG00000018693	slirp	88	54.545	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSAMXG00000018693	slirp	96	64.583	ENSONIG00000011692	slirp	97	64.583	Oreochromis_niloticus
ENSAMXG00000018693	slirp	84	57.143	ENSOANG00000022366	SLIRP	76	57.143	Ornithorhynchus_anatinus
ENSAMXG00000018693	slirp	98	62.245	ENSORLG00000010761	slirp	76	62.245	Oryzias_latipes
ENSAMXG00000018693	slirp	98	61.224	ENSORLG00020022188	slirp	98	61.224	Oryzias_latipes_hni
ENSAMXG00000018693	slirp	97	61.856	ENSORLG00015020171	slirp	96	61.856	Oryzias_latipes_hsok
ENSAMXG00000018693	slirp	98	62.245	ENSOMEG00000019321	slirp	98	62.245	Oryzias_melastigma
ENSAMXG00000018693	slirp	88	54.545	ENSPPAG00000040710	-	80	54.545	Pan_paniscus
ENSAMXG00000018693	slirp	65	61.538	ENSPPRG00000014350	SLIRP	66	61.538	Panthera_pardus
ENSAMXG00000018693	slirp	65	61.538	ENSPTIG00000014196	SLIRP	66	61.538	Panthera_tigris_altaica
ENSAMXG00000018693	slirp	85	55.294	ENSPTRG00000030691	SLIRP	79	55.294	Pan_troglodytes
ENSAMXG00000018693	slirp	87	50.575	ENSPANG00000026323	SLIRP	80	50.575	Papio_anubis
ENSAMXG00000018693	slirp	66	56.061	ENSPKIG00000008831	slirp	65	56.061	Paramormyrops_kingsleyae
ENSAMXG00000018693	slirp	79	63.291	ENSPMGG00000010541	slirp	91	63.291	Periophthalmus_magnuspinnatus
ENSAMXG00000018693	slirp	88	46.591	ENSPEMG00000013234	Slirp	77	46.591	Peromyscus_maniculatus_bairdii
ENSAMXG00000018693	slirp	85	54.118	ENSPMAG00000009355	slirp	94	54.118	Petromyzon_marinus
ENSAMXG00000018693	slirp	69	59.420	ENSPCIG00000026842	-	74	59.420	Phascolarctos_cinereus
ENSAMXG00000018693	slirp	98	60.204	ENSPFOG00000006758	slirp	98	60.204	Poecilia_formosa
ENSAMXG00000018693	slirp	98	60.204	ENSPLAG00000011140	slirp	98	60.204	Poecilia_latipinna
ENSAMXG00000018693	slirp	98	60.204	ENSPMEG00000019535	slirp	98	60.204	Poecilia_mexicana
ENSAMXG00000018693	slirp	98	60.204	ENSPREG00000011673	slirp	98	60.204	Poecilia_reticulata
ENSAMXG00000018693	slirp	87	52.874	ENSPPYG00000006030	SLIRP	80	52.874	Pongo_abelii
ENSAMXG00000018693	slirp	76	52.632	ENSPCOG00000015159	SLIRP	67	54.167	Propithecus_coquereli
ENSAMXG00000018693	slirp	98	67.347	ENSPNAG00000008633	slirp	99	67.347	Pygocentrus_nattereri
ENSAMXG00000018693	slirp	65	60.000	ENSRBIG00000031396	-	65	60.000	Rhinopithecus_bieti
ENSAMXG00000018693	slirp	85	52.941	ENSRBIG00000032222	-	79	52.941	Rhinopithecus_bieti
ENSAMXG00000018693	slirp	67	58.209	ENSRBIG00000032998	-	60	60.000	Rhinopithecus_bieti
ENSAMXG00000018693	slirp	85	48.235	ENSRBIG00000035817	-	79	48.235	Rhinopithecus_bieti
ENSAMXG00000018693	slirp	85	52.941	ENSRROG00000036656	-	79	52.941	Rhinopithecus_roxellana
ENSAMXG00000018693	slirp	67	58.209	ENSRROG00000017133	-	70	58.209	Rhinopithecus_roxellana
ENSAMXG00000018693	slirp	71	57.746	ENSRROG00000041312	-	70	57.746	Rhinopithecus_roxellana
ENSAMXG00000018693	slirp	65	61.538	ENSRROG00000035604	-	65	61.538	Rhinopithecus_roxellana
ENSAMXG00000018693	slirp	65	61.538	ENSSBOG00000020014	SLIRP	70	61.538	Saimiri_boliviensis_boliviensis
ENSAMXG00000018693	slirp	99	59.596	ENSSFOG00015011165	slirp	99	59.596	Scleropages_formosus
ENSAMXG00000018693	slirp	98	46.000	ENSSMAG00000012930	slirp	98	46.000	Scophthalmus_maximus
ENSAMXG00000018693	slirp	98	62.245	ENSSDUG00000021883	slirp	64	62.245	Seriola_dumerili
ENSAMXG00000018693	slirp	98	62.245	ENSSLDG00000023136	slirp	89	62.245	Seriola_lalandi_dorsalis
ENSAMXG00000018693	slirp	74	60.811	ENSSPUG00000009346	SLIRP	76	60.811	Sphenodon_punctatus
ENSAMXG00000018693	slirp	98	63.265	ENSSPAG00000013477	slirp	98	63.265	Stegastes_partitus
ENSAMXG00000018693	slirp	88	52.273	ENSSSCG00000028167	SLIRP	79	52.273	Sus_scrofa
ENSAMXG00000018693	slirp	76	48.684	ENSTGUG00000012337	SLIRP	77	46.341	Taeniopygia_guttata
ENSAMXG00000018693	slirp	99	56.000	ENSTRUG00000020127	slirp	99	56.000	Takifugu_rubripes
ENSAMXG00000018693	slirp	88	54.545	ENSUAMG00000022445	SLIRP	78	54.545	Ursus_americanus
ENSAMXG00000018693	slirp	88	55.682	ENSUMAG00000007166	SLIRP	78	55.682	Ursus_maritimus
ENSAMXG00000018693	slirp	87	50.575	ENSVPAG00000001781	SLIRP	80	50.575	Vicugna_pacos
ENSAMXG00000018693	slirp	88	51.136	ENSVVUG00000004436	SLIRP	79	51.136	Vulpes_vulpes
ENSAMXG00000018693	slirp	81	60.494	ENSXETG00000030343	SLIRP	91	60.494	Xenopus_tropicalis
ENSAMXG00000018693	slirp	88	64.773	ENSXCOG00000009422	slirp	88	64.773	Xiphophorus_couchianus
ENSAMXG00000018693	slirp	98	60.204	ENSXMAG00000015655	slirp	98	60.204	Xiphophorus_maculatus