EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000018715 (Gene tree)
Gene ID: 103042494
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2107 bases
Position: chr16:2488915-2491021
Accession: 103042494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019277	S4	PF01479.25	2.4e-10	1	1
ENSAMXP00000019277	Ribosomal_S4	PF00163.19	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019277	-	531	XM_007250627	ENSAMXP00000019277	176 (aa)	XP_007250689	W5LHG5

Gene Model

Click here to download ENSAMXG00000018715's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018715	imp3	99	85.714	ENSAPOG00000014720	imp3	96	85.714	Acanthochromis_polyacanthus
ENSAMXG00000018715	imp3	99	70.455	ENSAMEG00000019247	IMP3	96	70.455	Ailuropoda_melanoleuca
ENSAMXG00000018715	imp3	100	86.932	ENSACIG00000022070	imp3	94	86.932	Amphilophus_citrinellus
ENSAMXG00000018715	imp3	99	86.286	ENSAOCG00000015761	imp3	96	86.286	Amphiprion_ocellaris
ENSAMXG00000018715	imp3	99	86.286	ENSAPEG00000005250	imp3	96	86.286	Amphiprion_percula
ENSAMXG00000018715	imp3	100	86.364	ENSATEG00000020021	imp3	96	86.286	Anabas_testudineus
ENSAMXG00000018715	imp3	99	68.156	ENSACAG00000016259	IMP3	96	68.156	Anolis_carolinensis
ENSAMXG00000018715	imp3	99	59.659	ENSANAG00000036874	-	95	59.659	Aotus_nancymaae
ENSAMXG00000018715	imp3	99	69.886	ENSANAG00000016669	-	96	69.886	Aotus_nancymaae
ENSAMXG00000018715	imp3	99	86.857	ENSACLG00000009929	imp3	96	86.857	Astatotilapia_calliptera
ENSAMXG00000018715	imp3	98	49.133	WBGene00016740	C48B6.2	95	49.133	Caenorhabditis_elegans
ENSAMXG00000018715	imp3	99	69.886	ENSCJAG00000044585	IMP3	96	69.886	Callithrix_jacchus
ENSAMXG00000018715	imp3	99	68.182	ENSCAFG00000018039	IMP3	79	68.182	Canis_familiaris
ENSAMXG00000018715	imp3	99	68.182	ENSCAFG00020003760	-	96	68.182	Canis_lupus_dingo
ENSAMXG00000018715	imp3	99	55.682	ENSCAFG00020006737	-	95	56.250	Canis_lupus_dingo
ENSAMXG00000018715	imp3	99	69.886	ENSCHIG00000006295	IMP3	96	69.886	Capra_hircus
ENSAMXG00000018715	imp3	99	69.318	ENSTSYG00000005503	IMP3	96	69.318	Carlito_syrichta
ENSAMXG00000018715	imp3	99	69.886	ENSCPOG00000012016	IMP3	96	69.886	Cavia_porcellus
ENSAMXG00000018715	imp3	99	69.886	ENSCCAG00000002712	-	96	69.886	Cebus_capucinus
ENSAMXG00000018715	imp3	99	60.920	ENSCCAG00000023378	-	99	60.345	Cebus_capucinus
ENSAMXG00000018715	imp3	99	69.318	ENSCATG00000015188	IMP3	96	69.318	Cercocebus_atys
ENSAMXG00000018715	imp3	99	69.318	ENSCSAG00000019732	IMP3	96	69.318	Chlorocebus_sabaeus
ENSAMXG00000018715	imp3	99	69.886	ENSCHOG00000012046	IMP3	96	69.886	Choloepus_hoffmanni
ENSAMXG00000018715	imp3	99	64.407	ENSCPBG00000021662	IMP3	96	64.407	Chrysemys_picta_bellii
ENSAMXG00000018715	imp3	99	64.943	ENSCING00000004233	-	96	64.943	Ciona_intestinalis
ENSAMXG00000018715	imp3	99	66.667	ENSCSAVG00000000698	-	96	66.667	Ciona_savignyi
ENSAMXG00000018715	imp3	99	69.318	ENSCANG00000018342	IMP3	96	69.318	Colobus_angolensis_palliatus
ENSAMXG00000018715	imp3	99	69.318	ENSCGRG00001001326	Imp3	96	69.318	Cricetulus_griseus_chok1gshd
ENSAMXG00000018715	imp3	99	69.318	ENSCGRG00000018907	Imp3	96	69.318	Cricetulus_griseus_crigri
ENSAMXG00000018715	imp3	99	86.286	ENSCSEG00000017200	imp3	96	86.286	Cynoglossus_semilaevis
ENSAMXG00000018715	imp3	99	77.473	ENSCVAG00000019511	imp3	96	77.473	Cyprinodon_variegatus
ENSAMXG00000018715	imp3	99	90.286	ENSDARG00000115266	imp3	100	89.941	Danio_rerio
ENSAMXG00000018715	imp3	99	68.750	ENSDNOG00000015787	IMP3	78	68.750	Dasypus_novemcinctus
ENSAMXG00000018715	imp3	99	71.023	ENSDORG00000029301	Imp3	96	71.023	Dipodomys_ordii
ENSAMXG00000018715	imp3	99	63.793	FBgn0034232	CG4866	96	63.793	Drosophila_melanogaster
ENSAMXG00000018715	imp3	99	69.886	ENSETEG00000004278	IMP3	96	69.886	Echinops_telfairi
ENSAMXG00000018715	imp3	100	72.727	ENSEBUG00000002343	imp3	96	72.727	Eptatretus_burgeri
ENSAMXG00000018715	imp3	99	68.750	ENSEASG00005015693	IMP3	96	68.750	Equus_asinus_asinus
ENSAMXG00000018715	imp3	99	69.318	ENSECAG00000015786	IMP3	96	69.318	Equus_caballus
ENSAMXG00000018715	imp3	99	86.857	ENSELUG00000023264	imp3	96	86.857	Esox_lucius
ENSAMXG00000018715	imp3	99	69.318	ENSFCAG00000040328	IMP3	96	69.318	Felis_catus
ENSAMXG00000018715	imp3	69	54.472	ENSFALG00000014811	IMP3	93	56.911	Ficedula_albicollis
ENSAMXG00000018715	imp3	99	69.886	ENSFDAG00000018422	IMP3	96	69.886	Fukomys_damarensis
ENSAMXG00000018715	imp3	99	86.857	ENSFHEG00000016954	imp3	96	86.857	Fundulus_heteroclitus
ENSAMXG00000018715	imp3	99	84.571	ENSGMOG00000018162	imp3	96	84.571	Gadus_morhua
ENSAMXG00000018715	imp3	99	54.802	ENSGALG00000040238	IMP3	96	56.497	Gallus_gallus
ENSAMXG00000018715	imp3	99	86.286	ENSGAFG00000007425	imp3	96	86.286	Gambusia_affinis
ENSAMXG00000018715	imp3	99	85.143	ENSGACG00000015998	imp3	96	85.143	Gasterosteus_aculeatus
ENSAMXG00000018715	imp3	99	64.407	ENSGAGG00000008163	IMP3	96	64.407	Gopherus_agassizii
ENSAMXG00000018715	imp3	99	69.318	ENSGGOG00000025122	IMP3	96	69.318	Gorilla_gorilla
ENSAMXG00000018715	imp3	99	86.286	ENSHBUG00000018453	imp3	96	86.286	Haplochromis_burtoni
ENSAMXG00000018715	imp3	99	69.318	ENSHGLG00000019824	IMP3	96	69.318	Heterocephalus_glaber_female
ENSAMXG00000018715	imp3	99	69.318	ENSHGLG00100020660	IMP3	96	69.318	Heterocephalus_glaber_male
ENSAMXG00000018715	imp3	100	85.795	ENSHCOG00000020565	imp3	96	85.714	Hippocampus_comes
ENSAMXG00000018715	imp3	99	89.714	ENSIPUG00000013142	imp3	96	89.714	Ictalurus_punctatus
ENSAMXG00000018715	imp3	99	69.886	ENSSTOG00000030143	IMP3	96	69.886	Ictidomys_tridecemlineatus
ENSAMXG00000018715	imp3	99	86.286	ENSKMAG00000001956	imp3	96	86.286	Kryptolebias_marmoratus
ENSAMXG00000018715	imp3	99	85.143	ENSLBEG00000008178	imp3	96	85.143	Labrus_bergylta
ENSAMXG00000018715	imp3	99	81.143	ENSLACG00000022148	imp3	96	81.143	Latimeria_chalumnae
ENSAMXG00000018715	imp3	99	81.143	ENSLOCG00000010237	imp3	96	81.143	Lepisosteus_oculatus
ENSAMXG00000018715	imp3	99	69.318	ENSLAFG00000004425	IMP3	96	69.318	Loxodonta_africana
ENSAMXG00000018715	imp3	99	69.318	ENSMFAG00000008867	IMP3	96	69.318	Macaca_fascicularis
ENSAMXG00000018715	imp3	99	69.318	ENSMMUG00000016103	IMP3	96	69.318	Macaca_mulatta
ENSAMXG00000018715	imp3	99	69.318	ENSMNEG00000026328	IMP3	96	69.318	Macaca_nemestrina
ENSAMXG00000018715	imp3	99	87.429	ENSMAMG00000003215	imp3	96	87.429	Mastacembelus_armatus
ENSAMXG00000018715	imp3	99	86.857	ENSMZEG00005005544	imp3	96	86.857	Maylandia_zebra
ENSAMXG00000018715	imp3	99	68.750	ENSMAUG00000010279	Imp3	96	68.750	Mesocricetus_auratus
ENSAMXG00000018715	imp3	99	68.750	ENSMICG00000044149	IMP3	96	68.750	Microcebus_murinus
ENSAMXG00000018715	imp3	99	69.318	ENSMOCG00000008647	Imp3	96	69.318	Microtus_ochrogaster
ENSAMXG00000018715	imp3	100	87.500	ENSMMOG00000018117	imp3	84	87.500	Mola_mola
ENSAMXG00000018715	imp3	99	67.614	ENSMODG00000025193	IMP3	96	67.614	Monodelphis_domestica
ENSAMXG00000018715	imp3	100	85.311	ENSMALG00000006505	imp3	96	85.714	Monopterus_albus
ENSAMXG00000018715	imp3	99	69.318	MGP_CAROLIEiJ_G0032258	Imp3	96	69.318	Mus_caroli
ENSAMXG00000018715	imp3	99	69.318	ENSMUSG00000032288	Imp3	96	69.318	Mus_musculus
ENSAMXG00000018715	imp3	99	69.318	MGP_PahariEiJ_G0015125	Imp3	96	69.318	Mus_pahari
ENSAMXG00000018715	imp3	99	69.318	MGP_SPRETEiJ_G0033398	Imp3	96	69.318	Mus_spretus
ENSAMXG00000018715	imp3	99	68.750	ENSMPUG00000020147	IMP3	96	68.750	Mustela_putorius_furo
ENSAMXG00000018715	imp3	99	69.318	ENSMLUG00000014032	IMP3	96	69.318	Myotis_lucifugus
ENSAMXG00000018715	imp3	99	67.045	ENSNGAG00000017248	Imp3	96	67.045	Nannospalax_galili
ENSAMXG00000018715	imp3	99	85.714	ENSNBRG00000004060	imp3	96	85.714	Neolamprologus_brichardi
ENSAMXG00000018715	imp3	99	70.455	ENSOPRG00000015906	-	96	70.455	Ochotona_princeps
ENSAMXG00000018715	imp3	99	69.886	ENSODEG00000020194	IMP3	96	69.886	Octodon_degus
ENSAMXG00000018715	imp3	99	85.714	ENSONIG00000010661	imp3	96	85.714	Oreochromis_niloticus
ENSAMXG00000018715	imp3	99	69.318	ENSOCUG00000004690	IMP3	96	69.318	Oryctolagus_cuniculus
ENSAMXG00000018715	imp3	99	82.857	ENSORLG00000004484	imp3	96	82.857	Oryzias_latipes
ENSAMXG00000018715	imp3	99	82.857	ENSORLG00020003771	imp3	96	82.857	Oryzias_latipes_hni
ENSAMXG00000018715	imp3	99	82.286	ENSORLG00015006933	imp3	96	82.286	Oryzias_latipes_hsok
ENSAMXG00000018715	imp3	99	84.000	ENSOMEG00000016160	imp3	96	84.000	Oryzias_melastigma
ENSAMXG00000018715	imp3	99	69.318	ENSOGAG00000004917	IMP3	96	69.318	Otolemur_garnettii
ENSAMXG00000018715	imp3	99	69.318	ENSPPAG00000009241	IMP3	96	69.318	Pan_paniscus
ENSAMXG00000018715	imp3	99	69.318	ENSPPRG00000018701	IMP3	96	69.318	Panthera_pardus
ENSAMXG00000018715	imp3	99	69.318	ENSPTRG00000052235	IMP3	96	69.318	Pan_troglodytes
ENSAMXG00000018715	imp3	99	69.318	ENSPANG00000013668	IMP3	96	69.318	Papio_anubis
ENSAMXG00000018715	imp3	100	88.636	ENSPKIG00000007169	imp3	98	88.636	Paramormyrops_kingsleyae
ENSAMXG00000018715	imp3	99	76.966	ENSPMGG00000009379	imp3	96	76.966	Periophthalmus_magnuspinnatus
ENSAMXG00000018715	imp3	99	69.318	ENSPEMG00000013003	Imp3	96	69.318	Peromyscus_maniculatus_bairdii
ENSAMXG00000018715	imp3	99	86.286	ENSPFOG00000016529	imp3	96	86.286	Poecilia_formosa
ENSAMXG00000018715	imp3	99	86.857	ENSPLAG00000013831	imp3	96	86.857	Poecilia_latipinna
ENSAMXG00000018715	imp3	99	86.286	ENSPMEG00000000797	imp3	96	86.286	Poecilia_mexicana
ENSAMXG00000018715	imp3	99	87.429	ENSPREG00000006885	imp3	96	87.429	Poecilia_reticulata
ENSAMXG00000018715	imp3	99	69.886	ENSPPYG00000006664	IMP3	96	69.886	Pongo_abelii
ENSAMXG00000018715	imp3	99	69.886	ENSPCAG00000006920	IMP3	96	69.886	Procavia_capensis
ENSAMXG00000018715	imp3	99	68.750	ENSPCOG00000012367	IMP3	96	68.750	Propithecus_coquereli
ENSAMXG00000018715	imp3	99	69.886	ENSPVAG00000010036	IMP3	96	69.886	Pteropus_vampyrus
ENSAMXG00000018715	imp3	99	86.857	ENSPNYG00000000324	imp3	96	86.857	Pundamilia_nyererei
ENSAMXG00000018715	imp3	99	90.286	ENSPNAG00000017113	imp3	96	90.286	Pygocentrus_nattereri
ENSAMXG00000018715	imp3	99	69.318	ENSRNOG00000017460	Imp3	96	69.318	Rattus_norvegicus
ENSAMXG00000018715	imp3	99	68.750	ENSRBIG00000024522	IMP3	96	68.750	Rhinopithecus_bieti
ENSAMXG00000018715	imp3	99	68.750	ENSRROG00000024157	IMP3	96	68.750	Rhinopithecus_roxellana
ENSAMXG00000018715	imp3	100	51.977	YHR148W	-	97	51.977	Saccharomyces_cerevisiae
ENSAMXG00000018715	imp3	99	60.795	ENSSBOG00000026404	-	95	60.795	Saimiri_boliviensis_boliviensis
ENSAMXG00000018715	imp3	99	69.886	ENSSBOG00000006542	-	96	69.886	Saimiri_boliviensis_boliviensis
ENSAMXG00000018715	imp3	99	65.341	ENSSHAG00000006200	IMP3	96	65.341	Sarcophilus_harrisii
ENSAMXG00000018715	imp3	99	85.714	ENSSFOG00015012483	imp3	96	85.714	Scleropages_formosus
ENSAMXG00000018715	imp3	100	85.795	ENSSMAG00000007865	imp3	96	85.714	Scophthalmus_maximus
ENSAMXG00000018715	imp3	99	85.714	ENSSDUG00000010594	imp3	96	85.714	Seriola_dumerili
ENSAMXG00000018715	imp3	99	85.714	ENSSLDG00000015587	imp3	96	85.714	Seriola_lalandi_dorsalis
ENSAMXG00000018715	imp3	99	69.886	ENSSARG00000009657	IMP3	96	69.886	Sorex_araneus
ENSAMXG00000018715	imp3	99	84.571	ENSSPAG00000002088	imp3	96	84.571	Stegastes_partitus
ENSAMXG00000018715	imp3	99	55.367	ENSTGUG00000013228	IMP3	96	57.062	Taeniopygia_guttata
ENSAMXG00000018715	imp3	99	85.143	ENSTRUG00000025783	imp3	96	85.143	Takifugu_rubripes
ENSAMXG00000018715	imp3	99	69.886	ENSUAMG00000022724	IMP3	96	69.886	Ursus_americanus
ENSAMXG00000018715	imp3	99	69.886	ENSUMAG00000003736	IMP3	96	69.886	Ursus_maritimus
ENSAMXG00000018715	imp3	99	68.750	ENSVVUG00000019589	IMP3	96	68.750	Vulpes_vulpes
ENSAMXG00000018715	imp3	100	85.795	ENSXCOG00000007392	imp3	96	85.795	Xiphophorus_couchianus
ENSAMXG00000018715	imp3	99	86.286	ENSXMAG00000023049	imp3	96	86.286	Xiphophorus_maculatus