EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018852 (Gene tree)
Gene ID: 103023224
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 65166 bases
Position: chr4:9055141-9120306
Accession: 103023224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019460	RNA_pol_Rpb1_5	PF04998.17	1.7e-88	1	1
ENSAMXP00000019460	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSAMXP00000019460	RNA_pol_Rpb1_2	PF00623.20	1.5e-45	1	1
ENSAMXP00000019460	RNA_pol_Rpb1_3	PF04983.18	2.2e-41	1	1
ENSAMXP00000019460	RNA_pol_Rpb1_1	PF04997.12	2.7e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019460	-	4041	XM_022669061	ENSAMXP00000019460	1346 (aa)	XP_022524782	W5LHZ8

Gene Model

Click here to download ENSAMXG00000018852's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03020	RNA polymerase	KEGG
amex04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018852	polr3a	91	35.398	ENSAMXG00000020046	polr2a	68	35.398

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018852	polr3a	100	87.482	ENSG00000148606	POLR3A	98	91.139	Homo_sapiens
ENSAMXG00000018852	polr3a	61	83.391	ENSAPOG00000022727	polr3a	99	83.391	Acanthochromis_polyacanthus
ENSAMXG00000018852	polr3a	100	87.437	ENSAMEG00000017801	POLR3A	100	87.437	Ailuropoda_melanoleuca
ENSAMXG00000018852	polr3a	93	89.308	ENSACIG00000024504	polr3a	97	89.308	Amphilophus_citrinellus
ENSAMXG00000018852	polr3a	100	85.827	ENSAOCG00000003949	-	100	85.827	Amphiprion_ocellaris
ENSAMXG00000018852	polr3a	100	89.209	ENSAOCG00000002071	polr3a	100	89.209	Amphiprion_ocellaris
ENSAMXG00000018852	polr3a	100	89.065	ENSAPEG00000001966	-	100	89.065	Amphiprion_percula
ENSAMXG00000018852	polr3a	100	89.209	ENSAPEG00000013351	polr3a	100	89.209	Amphiprion_percula
ENSAMXG00000018852	polr3a	100	89.424	ENSATEG00000023277	polr3a	100	89.424	Anabas_testudineus
ENSAMXG00000018852	polr3a	99	88.000	ENSAPLG00000015878	POLR3A	99	88.000	Anas_platyrhynchos
ENSAMXG00000018852	polr3a	93	86.096	ENSACAG00000007985	POLR3A	99	86.096	Anolis_carolinensis
ENSAMXG00000018852	polr3a	100	84.986	ENSANAG00000028922	POLR3A	96	91.720	Aotus_nancymaae
ENSAMXG00000018852	polr3a	100	89.496	ENSACLG00000005914	polr3a	100	89.496	Astatotilapia_calliptera
ENSAMXG00000018852	polr3a	100	87.122	ENSBTAG00000013259	POLR3A	100	87.122	Bos_taurus
ENSAMXG00000018852	polr3a	99	53.485	WBGene00004411	rpc-1	99	53.485	Caenorhabditis_elegans
ENSAMXG00000018852	polr3a	100	87.338	ENSCJAG00000001015	POLR3A	100	87.338	Callithrix_jacchus
ENSAMXG00000018852	polr3a	100	87.554	ENSCAFG00000015546	POLR3A	100	87.554	Canis_familiaris
ENSAMXG00000018852	polr3a	100	87.554	ENSCAFG00020014711	POLR3A	100	87.554	Canis_lupus_dingo
ENSAMXG00000018852	polr3a	100	86.906	ENSCHIG00000000352	POLR3A	100	86.906	Capra_hircus
ENSAMXG00000018852	polr3a	100	86.906	ENSTSYG00000006671	POLR3A	100	86.906	Carlito_syrichta
ENSAMXG00000018852	polr3a	99	86.982	ENSCAPG00000016031	POLR3A	100	86.982	Cavia_aperea
ENSAMXG00000018852	polr3a	100	87.050	ENSCPOG00000022387	POLR3A	100	87.050	Cavia_porcellus
ENSAMXG00000018852	polr3a	100	85.612	ENSCCAG00000032995	POLR3A	96	91.139	Cebus_capucinus
ENSAMXG00000018852	polr3a	100	87.482	ENSCATG00000035842	POLR3A	98	91.139	Cercocebus_atys
ENSAMXG00000018852	polr3a	100	87.194	ENSCLAG00000009629	POLR3A	100	87.194	Chinchilla_lanigera
ENSAMXG00000018852	polr3a	100	87.482	ENSCSAG00000009292	POLR3A	100	87.482	Chlorocebus_sabaeus
ENSAMXG00000018852	polr3a	81	83.189	ENSCHOG00000008368	POLR3A	95	83.189	Choloepus_hoffmanni
ENSAMXG00000018852	polr3a	99	87.896	ENSCPBG00000002079	POLR3A	99	87.896	Chrysemys_picta_bellii
ENSAMXG00000018852	polr3a	99	65.659	ENSCSAVG00000009925	-	99	65.659	Ciona_savignyi
ENSAMXG00000018852	polr3a	86	85.699	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSAMXG00000018852	polr3a	77	90.385	ENSCGRG00001015599	-	92	90.385	Cricetulus_griseus_chok1gshd
ENSAMXG00000018852	polr3a	87	85.826	ENSCGRG00000001019	Polr3a	100	85.826	Cricetulus_griseus_crigri
ENSAMXG00000018852	polr3a	99	89.769	ENSCSEG00000016653	polr3a	99	89.769	Cynoglossus_semilaevis
ENSAMXG00000018852	polr3a	99	89.553	ENSCVAG00000023049	polr3a	99	89.553	Cyprinodon_variegatus
ENSAMXG00000018852	polr3a	99	89.705	ENSDARG00000102569	polr3a	99	89.705	Danio_rerio
ENSAMXG00000018852	polr3a	100	86.691	ENSDNOG00000010194	POLR3A	100	86.691	Dasypus_novemcinctus
ENSAMXG00000018852	polr3a	100	87.266	ENSDORG00000000184	Polr3a	100	87.266	Dipodomys_ordii
ENSAMXG00000018852	polr3a	99	53.935	FBgn0030687	CG17209	99	53.935	Drosophila_melanogaster
ENSAMXG00000018852	polr3a	87	88.664	ENSETEG00000007477	POLR3A	89	88.664	Echinops_telfairi
ENSAMXG00000018852	polr3a	58	70.340	ENSEBUG00000013761	polr3a	98	70.340	Eptatretus_burgeri
ENSAMXG00000018852	polr3a	100	87.338	ENSEASG00005023053	POLR3A	100	87.338	Equus_asinus_asinus
ENSAMXG00000018852	polr3a	96	87.630	ENSECAG00000019416	POLR3A	100	86.994	Equus_caballus
ENSAMXG00000018852	polr3a	96	84.155	ENSEEUG00000001774	POLR3A	100	84.155	Erinaceus_europaeus
ENSAMXG00000018852	polr3a	100	87.150	ENSELUG00000014016	polr3a	100	87.150	Esox_lucius
ENSAMXG00000018852	polr3a	100	87.770	ENSFCAG00000000843	POLR3A	100	87.770	Felis_catus
ENSAMXG00000018852	polr3a	100	87.994	ENSFALG00000006913	POLR3A	100	87.994	Ficedula_albicollis
ENSAMXG00000018852	polr3a	100	86.835	ENSFDAG00000007813	POLR3A	100	86.835	Fukomys_damarensis
ENSAMXG00000018852	polr3a	91	93.008	ENSFHEG00000011922	polr3a	94	93.008	Fundulus_heteroclitus
ENSAMXG00000018852	polr3a	100	83.581	ENSGMOG00000000291	polr3a	99	83.581	Gadus_morhua
ENSAMXG00000018852	polr3a	100	88.129	ENSGALG00000004947	POLR3A	100	88.129	Gallus_gallus
ENSAMXG00000018852	polr3a	99	88.905	ENSGAFG00000005112	polr3a	99	88.905	Gambusia_affinis
ENSAMXG00000018852	polr3a	100	88.489	ENSGACG00000002304	polr3a	100	88.489	Gasterosteus_aculeatus
ENSAMXG00000018852	polr3a	95	87.509	ENSGAGG00000010386	POLR3A	98	87.509	Gopherus_agassizii
ENSAMXG00000018852	polr3a	99	86.344	ENSGGOG00000027729	POLR3A	98	91.139	Gorilla_gorilla
ENSAMXG00000018852	polr3a	100	89.353	ENSHBUG00000018098	polr3a	100	89.353	Haplochromis_burtoni
ENSAMXG00000018852	polr3a	100	86.763	ENSHGLG00000017899	POLR3A	100	86.763	Heterocephalus_glaber_female
ENSAMXG00000018852	polr3a	100	86.763	ENSHGLG00100008483	POLR3A	100	86.763	Heterocephalus_glaber_male
ENSAMXG00000018852	polr3a	100	88.273	ENSHCOG00000001075	polr3a	100	88.273	Hippocampus_comes
ENSAMXG00000018852	polr3a	100	87.266	ENSSTOG00000012983	POLR3A	100	87.266	Ictidomys_tridecemlineatus
ENSAMXG00000018852	polr3a	100	89.137	ENSKMAG00000015290	polr3a	100	89.137	Kryptolebias_marmoratus
ENSAMXG00000018852	polr3a	99	87.896	ENSLBEG00000017214	polr3a	99	87.896	Labrus_bergylta
ENSAMXG00000018852	polr3a	96	84.907	ENSLACG00000018557	POLR3A	99	84.907	Latimeria_chalumnae
ENSAMXG00000018852	polr3a	100	89.591	ENSLOCG00000004942	polr3a	100	89.591	Lepisosteus_oculatus
ENSAMXG00000018852	polr3a	100	85.838	ENSLAFG00000016719	POLR3A	100	85.838	Loxodonta_africana
ENSAMXG00000018852	polr3a	100	87.410	ENSMFAG00000032218	POLR3A	100	87.410	Macaca_fascicularis
ENSAMXG00000018852	polr3a	100	87.410	ENSMMUG00000005514	POLR3A	98	91.139	Macaca_mulatta
ENSAMXG00000018852	polr3a	99	81.058	ENSMNEG00000035163	POLR3A	99	86.744	Macaca_nemestrina
ENSAMXG00000018852	polr3a	100	85.172	ENSMLEG00000030014	POLR3A	98	91.139	Mandrillus_leucophaeus
ENSAMXG00000018852	polr3a	100	89.209	ENSMAMG00000017497	polr3a	100	89.209	Mastacembelus_armatus
ENSAMXG00000018852	polr3a	100	89.496	ENSMZEG00005000576	polr3a	100	89.496	Maylandia_zebra
ENSAMXG00000018852	polr3a	100	73.609	ENSMGAG00000005713	-	100	73.609	Meleagris_gallopavo
ENSAMXG00000018852	polr3a	100	85.324	ENSMAUG00000016247	Polr3a	100	85.324	Mesocricetus_auratus
ENSAMXG00000018852	polr3a	100	87.482	ENSMICG00000005937	POLR3A	100	87.576	Microcebus_murinus
ENSAMXG00000018852	polr3a	100	87.626	ENSMOCG00000012185	Polr3a	100	87.626	Microtus_ochrogaster
ENSAMXG00000018852	polr3a	100	88.273	ENSMMOG00000013822	polr3a	100	88.273	Mola_mola
ENSAMXG00000018852	polr3a	100	87.266	ENSMODG00000001036	POLR3A	100	87.266	Monodelphis_domestica
ENSAMXG00000018852	polr3a	100	88.849	ENSMALG00000001249	polr3a	100	88.849	Monopterus_albus
ENSAMXG00000018852	polr3a	100	87.482	MGP_CAROLIEiJ_G0019016	Polr3a	100	87.482	Mus_caroli
ENSAMXG00000018852	polr3a	100	87.410	ENSMUSG00000025280	Polr3a	100	87.410	Mus_musculus
ENSAMXG00000018852	polr3a	100	87.410	MGP_PahariEiJ_G0030029	Polr3a	100	87.410	Mus_pahari
ENSAMXG00000018852	polr3a	100	86.232	MGP_SPRETEiJ_G0019894	Polr3a	100	86.232	Mus_spretus
ENSAMXG00000018852	polr3a	100	86.947	ENSMPUG00000003790	POLR3A	100	86.947	Mustela_putorius_furo
ENSAMXG00000018852	polr3a	100	86.331	ENSMLUG00000011522	POLR3A	100	86.331	Myotis_lucifugus
ENSAMXG00000018852	polr3a	100	85.612	ENSNGAG00000015863	Polr3a	100	85.612	Nannospalax_galili
ENSAMXG00000018852	polr3a	100	87.770	ENSNBRG00000014262	polr3a	100	87.770	Neolamprologus_brichardi
ENSAMXG00000018852	polr3a	100	73.285	ENSNLEG00000010501	POLR3A	100	73.285	Nomascus_leucogenys
ENSAMXG00000018852	polr3a	99	74.545	ENSMEUG00000012446	POLR3A	100	74.545	Notamacropus_eugenii
ENSAMXG00000018852	polr3a	100	82.590	ENSOPRG00000001880	-	100	82.590	Ochotona_princeps
ENSAMXG00000018852	polr3a	100	86.978	ENSODEG00000015146	POLR3A	100	86.978	Octodon_degus
ENSAMXG00000018852	polr3a	100	89.784	ENSONIG00000016129	polr3a	100	89.784	Oreochromis_niloticus
ENSAMXG00000018852	polr3a	98	86.779	ENSOANG00000007013	POLR3A	100	86.779	Ornithorhynchus_anatinus
ENSAMXG00000018852	polr3a	100	87.050	ENSOCUG00000012450	POLR3A	100	87.050	Oryctolagus_cuniculus
ENSAMXG00000018852	polr3a	99	88.977	ENSORLG00000008958	polr3a	99	88.977	Oryzias_latipes
ENSAMXG00000018852	polr3a	99	86.671	ENSORLG00020007525	polr3a	98	89.046	Oryzias_latipes_hni
ENSAMXG00000018852	polr3a	99	88.977	ENSORLG00015006633	polr3a	99	88.977	Oryzias_latipes_hsok
ENSAMXG00000018852	polr3a	99	88.473	ENSOMEG00000012865	polr3a	99	88.473	Oryzias_melastigma
ENSAMXG00000018852	polr3a	100	87.410	ENSOGAG00000010995	POLR3A	100	87.410	Otolemur_garnettii
ENSAMXG00000018852	polr3a	100	86.782	ENSOARG00000009656	POLR3A	100	86.782	Ovis_aries
ENSAMXG00000018852	polr3a	100	87.770	ENSPPRG00000002128	POLR3A	100	87.770	Panthera_pardus
ENSAMXG00000018852	polr3a	100	87.770	ENSPTIG00000020916	POLR3A	100	87.770	Panthera_tigris_altaica
ENSAMXG00000018852	polr3a	100	87.410	ENSPTRG00000002664	POLR3A	98	91.139	Pan_troglodytes
ENSAMXG00000018852	polr3a	100	87.338	ENSPANG00000022508	POLR3A	98	91.139	Papio_anubis
ENSAMXG00000018852	polr3a	100	89.928	ENSPKIG00000008140	polr3a	100	91.740	Paramormyrops_kingsleyae
ENSAMXG00000018852	polr3a	98	87.582	ENSPSIG00000002092	POLR3A	100	87.582	Pelodiscus_sinensis
ENSAMXG00000018852	polr3a	100	87.266	ENSPEMG00000006768	Polr3a	100	87.266	Peromyscus_maniculatus_bairdii
ENSAMXG00000018852	polr3a	100	87.122	ENSPCIG00000015842	POLR3A	100	87.122	Phascolarctos_cinereus
ENSAMXG00000018852	polr3a	55	94.078	ENSPFOG00000006458	polr3a	99	94.078	Poecilia_formosa
ENSAMXG00000018852	polr3a	99	89.121	ENSPLAG00000000997	polr3a	99	89.121	Poecilia_latipinna
ENSAMXG00000018852	polr3a	99	89.049	ENSPMEG00000006821	polr3a	99	89.049	Poecilia_mexicana
ENSAMXG00000018852	polr3a	99	88.977	ENSPREG00000002385	polr3a	99	88.977	Poecilia_reticulata
ENSAMXG00000018852	polr3a	93	87.064	ENSPPYG00000002305	POLR3A	99	87.064	Pongo_abelii
ENSAMXG00000018852	polr3a	83	76.398	ENSPCAG00000005690	POLR3A	84	76.398	Procavia_capensis
ENSAMXG00000018852	polr3a	100	87.338	ENSPCOG00000028311	POLR3A	100	87.338	Propithecus_coquereli
ENSAMXG00000018852	polr3a	100	85.971	ENSPVAG00000015553	POLR3A	100	85.971	Pteropus_vampyrus
ENSAMXG00000018852	polr3a	100	89.568	ENSPNYG00000020987	polr3a	100	89.568	Pundamilia_nyererei
ENSAMXG00000018852	polr3a	99	89.057	ENSPNAG00000006629	polr3a	99	89.057	Pygocentrus_nattereri
ENSAMXG00000018852	polr3a	100	87.482	ENSRNOG00000010008	Polr3a	100	87.482	Rattus_norvegicus
ENSAMXG00000018852	polr3a	100	84.006	ENSRBIG00000034967	POLR3A	98	91.139	Rhinopithecus_bieti
ENSAMXG00000018852	polr3a	100	87.410	ENSRROG00000025527	POLR3A	98	91.139	Rhinopithecus_roxellana
ENSAMXG00000018852	polr3a	99	47.871	YOR116C	RPO31	99	47.871	Saccharomyces_cerevisiae
ENSAMXG00000018852	polr3a	100	87.410	ENSSBOG00000022199	POLR3A	100	87.410	Saimiri_boliviensis_boliviensis
ENSAMXG00000018852	polr3a	100	87.050	ENSSHAG00000007588	POLR3A	94	87.050	Sarcophilus_harrisii
ENSAMXG00000018852	polr3a	100	90.360	ENSSFOG00015014357	polr3a	100	90.360	Scleropages_formosus
ENSAMXG00000018852	polr3a	100	88.489	ENSSMAG00000001780	polr3a	100	88.489	Scophthalmus_maximus
ENSAMXG00000018852	polr3a	100	89.784	ENSSDUG00000019840	polr3a	100	89.784	Seriola_dumerili
ENSAMXG00000018852	polr3a	100	89.712	ENSSLDG00000023908	polr3a	100	89.712	Seriola_lalandi_dorsalis
ENSAMXG00000018852	polr3a	69	84.243	ENSSARG00000009916	POLR3A	89	84.243	Sorex_araneus
ENSAMXG00000018852	polr3a	100	85.468	ENSSPUG00000013209	POLR3A	100	85.468	Sphenodon_punctatus
ENSAMXG00000018852	polr3a	100	89.209	ENSSPAG00000017712	polr3a	100	89.209	Stegastes_partitus
ENSAMXG00000018852	polr3a	100	87.266	ENSSSCG00000010327	POLR3A	100	87.266	Sus_scrofa
ENSAMXG00000018852	polr3a	100	87.914	ENSTGUG00000006423	-	100	87.914	Taeniopygia_guttata
ENSAMXG00000018852	polr3a	99	88.617	ENSTRUG00000013488	polr3a	99	88.617	Takifugu_rubripes
ENSAMXG00000018852	polr3a	99	88.345	ENSTNIG00000013151	polr3a	99	88.345	Tetraodon_nigroviridis
ENSAMXG00000018852	polr3a	70	86.189	ENSTBEG00000015288	POLR3A	72	86.189	Tupaia_belangeri
ENSAMXG00000018852	polr3a	100	75.530	ENSTTRG00000007817	POLR3A	100	75.530	Tursiops_truncatus
ENSAMXG00000018852	polr3a	100	85.324	ENSUAMG00000011283	POLR3A	100	85.324	Ursus_americanus
ENSAMXG00000018852	polr3a	100	87.626	ENSUMAG00000013913	POLR3A	100	87.626	Ursus_maritimus
ENSAMXG00000018852	polr3a	99	79.127	ENSVPAG00000003285	POLR3A	100	79.127	Vicugna_pacos
ENSAMXG00000018852	polr3a	100	87.554	ENSVVUG00000025523	POLR3A	100	87.554	Vulpes_vulpes
ENSAMXG00000018852	polr3a	86	86.967	ENSXETG00000018101	polr3a	100	86.967	Xenopus_tropicalis
ENSAMXG00000018852	polr3a	99	89.265	ENSXMAG00000015213	polr3a	99	89.265	Xiphophorus_maculatus