EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000018868 (Gene tree)
Gene ID: 103025838
Gene Symbol: sbno2a
Alias: sb:eu274
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 31048 bases
Position: chr17:8831318-8862365
Accession: 103025838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027430	ResIII	PF04851.15	9.4e-07	1	1
ENSAMXP00000019469	ResIII	PF04851.15	1.5e-06	1	1
ENSAMXP00000054969	ResIII	PF04851.15	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019469	-	5389	XM_007235948	ENSAMXP00000019469	1634 (aa)	XP_007236010	W5LI07
ENSAMXT00000046687	-	3003	-	ENSAMXP00000027430	1000 (aa)	-	-
ENSAMXT00000042189	-	5707	XM_007235947	ENSAMXP00000054969	1665 (aa)	XP_007236009	UPI000BBDA072

Gene Model

Click here to download ENSAMXG00000018868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000018868	sbno2a	95	79.579	ENSAMXG00000015881	si:ch73-63e15.2	89	75.638
ENSAMXG00000018868	sbno2a	76	67.043	ENSAMXG00000019473	sbno1	69	67.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018868	sbno2a	97	69.392	ENSG00000064932	SBNO2	90	66.364	Homo_sapiens
ENSAMXG00000018868	sbno2a	99	78.000	ENSAPOG00000003185	si:ch73-63e15.2	92	78.057	Acanthochromis_polyacanthus
ENSAMXG00000018868	sbno2a	99	78.890	ENSAOCG00000016581	si:ch73-63e15.2	98	78.890	Amphiprion_ocellaris
ENSAMXG00000018868	sbno2a	96	81.405	ENSAPEG00000008862	si:ch73-63e15.2	79	78.669	Amphiprion_percula
ENSAMXG00000018868	sbno2a	96	80.415	ENSATEG00000023838	si:ch73-63e15.2	99	77.157	Anabas_testudineus
ENSAMXG00000018868	sbno2a	95	72.653	ENSAPLG00000007158	SBNO2	95	68.178	Anas_platyrhynchos
ENSAMXG00000018868	sbno2a	97	69.530	ENSANAG00000026685	SBNO2	87	68.130	Aotus_nancymaae
ENSAMXG00000018868	sbno2a	96	79.360	ENSACLG00000005090	si:ch73-63e15.2	80	76.000	Astatotilapia_calliptera
ENSAMXG00000018868	sbno2a	98	69.369	ENSBTAG00000020780	SBNO2	91	65.818	Bos_taurus
ENSAMXG00000018868	sbno2a	95	71.134	ENSCAFG00000019543	SBNO2	95	62.010	Canis_familiaris
ENSAMXG00000018868	sbno2a	95	71.134	ENSCAFG00020017115	SBNO2	99	62.323	Canis_lupus_dingo
ENSAMXG00000018868	sbno2a	98	69.369	ENSCHIG00000026127	SBNO2	90	65.186	Capra_hircus
ENSAMXG00000018868	sbno2a	96	69.045	ENSCAPG00000005731	SBNO2	98	64.933	Cavia_aperea
ENSAMXG00000018868	sbno2a	96	69.045	ENSCPOG00000007477	SBNO2	90	64.784	Cavia_porcellus
ENSAMXG00000018868	sbno2a	97	68.993	ENSCCAG00000037518	SBNO2	88	67.472	Cebus_capucinus
ENSAMXG00000018868	sbno2a	97	69.223	ENSCATG00000037046	SBNO2	90	66.447	Cercocebus_atys
ENSAMXG00000018868	sbno2a	95	71.162	ENSCLAG00000010178	SBNO2	98	68.756	Chinchilla_lanigera
ENSAMXG00000018868	sbno2a	95	70.576	ENSCSAG00000012317	SBNO2	92	62.890	Chlorocebus_sabaeus
ENSAMXG00000018868	sbno2a	95	73.271	ENSCPBG00000008920	SBNO2	92	69.129	Chrysemys_picta_bellii
ENSAMXG00000018868	sbno2a	97	68.515	ENSCANG00000036745	SBNO2	95	68.273	Colobus_angolensis_palliatus
ENSAMXG00000018868	sbno2a	91	71.337	ENSCGRG00001023960	Sbno2	89	64.477	Cricetulus_griseus_chok1gshd
ENSAMXG00000018868	sbno2a	95	71.148	ENSCGRG00000011984	Sbno2	89	65.612	Cricetulus_griseus_crigri
ENSAMXG00000018868	sbno2a	95	77.349	ENSCSEG00000006856	si:ch73-63e15.2	95	81.273	Cynoglossus_semilaevis
ENSAMXG00000018868	sbno2a	97	78.498	ENSCVAG00000005663	si:ch73-63e15.2	79	78.136	Cyprinodon_variegatus
ENSAMXG00000018868	sbno2a	99	80.788	ENSDARG00000098801	sbno2a	99	79.326	Danio_rerio
ENSAMXG00000018868	sbno2a	95	77.661	ENSDARG00000016188	SBNO2	83	75.214	Danio_rerio
ENSAMXG00000018868	sbno2a	95	70.691	ENSDORG00000002916	Sbno2	88	66.944	Dipodomys_ordii
ENSAMXG00000018868	sbno2a	95	70.485	ENSEASG00005021621	SBNO2	91	65.878	Equus_asinus_asinus
ENSAMXG00000018868	sbno2a	95	70.123	ENSECAG00000011827	SBNO2	91	65.959	Equus_caballus
ENSAMXG00000018868	sbno2a	95	82.285	ENSELUG00000020457	si:ch73-63e15.2	93	71.931	Esox_lucius
ENSAMXG00000018868	sbno2a	95	72.114	ENSFALG00000013988	SBNO2	89	67.757	Ficedula_albicollis
ENSAMXG00000018868	sbno2a	95	67.934	ENSFDAG00000015186	SBNO2	86	66.251	Fukomys_damarensis
ENSAMXG00000018868	sbno2a	99	78.427	ENSFHEG00000022262	si:ch73-63e15.2	78	78.415	Fundulus_heteroclitus
ENSAMXG00000018868	sbno2a	95	80.570	ENSGMOG00000007542	si:ch73-63e15.2	98	78.947	Gadus_morhua
ENSAMXG00000018868	sbno2a	95	72.755	ENSGALG00000037522	SBNO2	87	69.243	Gallus_gallus
ENSAMXG00000018868	sbno2a	96	79.876	ENSGAFG00000004860	si:ch73-63e15.2	91	79.862	Gambusia_affinis
ENSAMXG00000018868	sbno2a	95	79.814	ENSGACG00000013190	si:ch73-63e15.2	96	79.587	Gasterosteus_aculeatus
ENSAMXG00000018868	sbno2a	95	73.156	ENSGAGG00000008348	SBNO2	89	69.091	Gopherus_agassizii
ENSAMXG00000018868	sbno2a	96	79.545	ENSHBUG00000010742	si:ch73-63e15.2	79	78.028	Haplochromis_burtoni
ENSAMXG00000018868	sbno2a	95	70.215	ENSHGLG00000008739	SBNO2	84	68.366	Heterocephalus_glaber_female
ENSAMXG00000018868	sbno2a	95	70.588	ENSHGLG00100005269	SBNO2	98	68.453	Heterocephalus_glaber_male
ENSAMXG00000018868	sbno2a	99	74.879	ENSHCOG00000000884	si:ch73-63e15.2	94	74.820	Hippocampus_comes
ENSAMXG00000018868	sbno2a	99	84.180	ENSIPUG00000019672	sbno2	99	83.836	Ictalurus_punctatus
ENSAMXG00000018868	sbno2a	96	77.732	ENSIPUG00000000537	si:ch73-63e15.2	88	74.646	Ictalurus_punctatus
ENSAMXG00000018868	sbno2a	95	70.534	ENSSTOG00000025832	SBNO2	88	66.253	Ictidomys_tridecemlineatus
ENSAMXG00000018868	sbno2a	95	67.459	ENSJJAG00000017397	Sbno2	88	62.936	Jaculus_jaculus
ENSAMXG00000018868	sbno2a	97	78.447	ENSKMAG00000005541	si:ch73-63e15.2	81	75.658	Kryptolebias_marmoratus
ENSAMXG00000018868	sbno2a	99	78.600	ENSLBEG00000025016	si:ch73-63e15.2	96	82.185	Labrus_bergylta
ENSAMXG00000018868	sbno2a	64	71.810	ENSLBEG00000005937	-	100	71.684	Labrus_bergylta
ENSAMXG00000018868	sbno2a	61	70.016	ENSLACG00000012598	SBNO2	97	70.627	Latimeria_chalumnae
ENSAMXG00000018868	sbno2a	95	83.229	ENSLOCG00000004643	si:ch73-63e15.2	85	81.526	Lepisosteus_oculatus
ENSAMXG00000018868	sbno2a	83	74.558	ENSLAFG00000008824	SBNO2	92	62.305	Loxodonta_africana
ENSAMXG00000018868	sbno2a	97	67.197	ENSMFAG00000040030	SBNO2	89	66.266	Macaca_fascicularis
ENSAMXG00000018868	sbno2a	95	70.679	ENSMMUG00000010886	SBNO2	92	62.966	Macaca_mulatta
ENSAMXG00000018868	sbno2a	97	68.955	ENSMNEG00000039927	SBNO2	90	66.447	Macaca_nemestrina
ENSAMXG00000018868	sbno2a	95	70.679	ENSMLEG00000038556	SBNO2	98	65.345	Mandrillus_leucophaeus
ENSAMXG00000018868	sbno2a	96	80.145	ENSMAMG00000018758	si:ch73-63e15.2	78	77.349	Mastacembelus_armatus
ENSAMXG00000018868	sbno2a	96	79.442	ENSMZEG00005010682	si:ch73-63e15.2	80	76.000	Maylandia_zebra
ENSAMXG00000018868	sbno2a	95	72.330	ENSMGAG00000003801	SBNO2	89	71.182	Meleagris_gallopavo
ENSAMXG00000018868	sbno2a	97	69.469	ENSMAUG00000008034	Sbno2	89	65.764	Mesocricetus_auratus
ENSAMXG00000018868	sbno2a	96	69.756	ENSMICG00000013071	SBNO2	87	68.306	Microcebus_murinus
ENSAMXG00000018868	sbno2a	95	70.492	ENSMOCG00000010504	Sbno2	88	66.337	Microtus_ochrogaster
ENSAMXG00000018868	sbno2a	97	70.198	ENSMODG00000005382	SBNO2	84	68.412	Monodelphis_domestica
ENSAMXG00000018868	sbno2a	99	73.220	ENSMALG00000021831	si:ch73-63e15.2	96	80.602	Monopterus_albus
ENSAMXG00000018868	sbno2a	97	69.052	ENSMUSG00000035673	Sbno2	96	66.061	Mus_musculus
ENSAMXG00000018868	sbno2a	97	68.831	MGP_PahariEiJ_G0030976	Sbno2	88	66.226	Mus_pahari
ENSAMXG00000018868	sbno2a	97	69.386	MGP_SPRETEiJ_G0016381	Sbno2	94	66.226	Mus_spretus
ENSAMXG00000018868	sbno2a	95	70.795	ENSMPUG00000008747	SBNO2	91	70.251	Mustela_putorius_furo
ENSAMXG00000018868	sbno2a	95	69.619	ENSNGAG00000004308	Sbno2	95	62.839	Nannospalax_galili
ENSAMXG00000018868	sbno2a	95	78.601	ENSNBRG00000022968	si:ch73-63e15.2	93	84.856	Neolamprologus_brichardi
ENSAMXG00000018868	sbno2a	91	78.112	ENSNLEG00000001305	SBNO2	92	62.705	Nomascus_leucogenys
ENSAMXG00000018868	sbno2a	76	68.549	ENSMEUG00000013511	-	78	66.773	Notamacropus_eugenii
ENSAMXG00000018868	sbno2a	95	69.856	ENSOPRG00000017238	SBNO2	93	68.953	Ochotona_princeps
ENSAMXG00000018868	sbno2a	97	68.725	ENSODEG00000011822	SBNO2	88	64.716	Octodon_degus
ENSAMXG00000018868	sbno2a	96	79.855	ENSONIG00000002490	si:ch73-63e15.2	99	74.627	Oreochromis_niloticus
ENSAMXG00000018868	sbno2a	96	79.257	ENSORLG00000000913	si:ch73-63e15.2	79	79.896	Oryzias_latipes
ENSAMXG00000018868	sbno2a	96	79.218	ENSORLG00020010978	si:ch73-63e15.2	79	79.107	Oryzias_latipes_hni
ENSAMXG00000018868	sbno2a	96	79.649	ENSORLG00015000202	si:ch73-63e15.2	79	80.017	Oryzias_latipes_hsok
ENSAMXG00000018868	sbno2a	99	74.412	ENSOMEG00000000359	si:ch73-63e15.2	80	76.282	Oryzias_melastigma
ENSAMXG00000018868	sbno2a	98	67.968	ENSOARG00000011130	SBNO2	87	65.311	Ovis_aries
ENSAMXG00000018868	sbno2a	97	69.292	ENSPPAG00000032482	SBNO2	92	65.576	Pan_paniscus
ENSAMXG00000018868	sbno2a	97	69.392	ENSPTRG00000010185	SBNO2	90	66.502	Pan_troglodytes
ENSAMXG00000018868	sbno2a	97	65.075	ENSPANG00000009658	SBNO2	89	63.232	Papio_anubis
ENSAMXG00000018868	sbno2a	87	79.438	ENSPKIG00000009707	-	87	75.605	Paramormyrops_kingsleyae
ENSAMXG00000018868	sbno2a	97	79.651	ENSPKIG00000024201	si:ch73-63e15.2	88	77.612	Paramormyrops_kingsleyae
ENSAMXG00000018868	sbno2a	95	72.012	ENSPSIG00000002852	SBNO2	99	72.161	Pelodiscus_sinensis
ENSAMXG00000018868	sbno2a	99	75.845	ENSPMGG00000014375	si:ch73-63e15.2	93	73.579	Periophthalmus_magnuspinnatus
ENSAMXG00000018868	sbno2a	95	67.626	ENSPEMG00000024122	Sbno2	85	66.230	Peromyscus_maniculatus_bairdii
ENSAMXG00000018868	sbno2a	97	70.240	ENSPCIG00000011264	SBNO2	86	67.739	Phascolarctos_cinereus
ENSAMXG00000018868	sbno2a	96	79.876	ENSPFOG00000004096	si:ch73-63e15.2	100	78.157	Poecilia_formosa
ENSAMXG00000018868	sbno2a	96	79.876	ENSPLAG00000014653	si:ch73-63e15.2	78	79.500	Poecilia_latipinna
ENSAMXG00000018868	sbno2a	99	77.286	ENSPMEG00000002129	si:ch73-63e15.2	97	77.384	Poecilia_mexicana
ENSAMXG00000018868	sbno2a	97	79.403	ENSPREG00000006755	si:ch73-63e15.2	80	76.183	Poecilia_reticulata
ENSAMXG00000018868	sbno2a	82	73.866	ENSPCAG00000012256	SBNO2	80	66.968	Procavia_capensis
ENSAMXG00000018868	sbno2a	96	62.564	ENSPCOG00000015216	SBNO2	87	62.105	Propithecus_coquereli
ENSAMXG00000018868	sbno2a	96	79.442	ENSPNYG00000019926	si:ch73-63e15.2	79	77.861	Pundamilia_nyererei
ENSAMXG00000018868	sbno2a	98	78.637	ENSPNAG00000020260	si:ch73-63e15.2	97	71.269	Pygocentrus_nattereri
ENSAMXG00000018868	sbno2a	100	84.512	ENSPNAG00000026609	sbno2a	100	83.232	Pygocentrus_nattereri
ENSAMXG00000018868	sbno2a	98	68.893	ENSRNOG00000013987	Sbno2	88	68.407	Rattus_norvegicus
ENSAMXG00000018868	sbno2a	97	67.197	ENSRBIG00000009740	SBNO2	87	67.507	Rhinopithecus_bieti
ENSAMXG00000018868	sbno2a	81	71.566	ENSRROG00000044671	SBNO2	88	72.181	Rhinopithecus_roxellana
ENSAMXG00000018868	sbno2a	97	68.893	ENSSBOG00000023562	SBNO2	90	66.893	Saimiri_boliviensis_boliviensis
ENSAMXG00000018868	sbno2a	97	70.020	ENSSHAG00000010241	SBNO2	97	70.070	Sarcophilus_harrisii
ENSAMXG00000018868	sbno2a	95	79.600	ENSSFOG00015005861	si:ch73-63e15.2	97	76.398	Scleropages_formosus
ENSAMXG00000018868	sbno2a	96	80.558	ENSSMAG00000012489	si:ch73-63e15.2	75	79.387	Scophthalmus_maximus
ENSAMXG00000018868	sbno2a	96	80.952	ENSSDUG00000003527	si:ch73-63e15.2	75	79.795	Seriola_dumerili
ENSAMXG00000018868	sbno2a	96	80.849	ENSSLDG00000004623	si:ch73-63e15.2	75	79.540	Seriola_lalandi_dorsalis
ENSAMXG00000018868	sbno2a	95	81.856	ENSSPAG00000017717	si:ch73-63e15.2	76	82.234	Stegastes_partitus
ENSAMXG00000018868	sbno2a	99	69.132	ENSSSCG00000030042	SBNO2	89	68.827	Sus_scrofa
ENSAMXG00000018868	sbno2a	97	78.579	ENSTRUG00000018193	si:ch73-63e15.2	86	80.073	Takifugu_rubripes
ENSAMXG00000018868	sbno2a	51	85.294	ENSTNIG00000000856	si:ch73-63e15.2	93	85.656	Tetraodon_nigroviridis
ENSAMXG00000018868	sbno2a	95	70.928	ENSUAMG00000006568	SBNO2	93	72.023	Ursus_americanus
ENSAMXG00000018868	sbno2a	95	71.134	ENSVVUG00000022823	SBNO2	89	64.929	Vulpes_vulpes
ENSAMXG00000018868	sbno2a	83	75.752	ENSXETG00000021579	sbno2	91	75.752	Xenopus_tropicalis
ENSAMXG00000018868	sbno2a	99	77.031	ENSXCOG00000009209	si:ch73-63e15.2	94	77.131	Xiphophorus_couchianus
ENSAMXG00000018868	sbno2a	96	79.979	ENSXMAG00000012091	si:ch73-63e15.2	82	83.958	Xiphophorus_maculatus