EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000018985 (Gene tree)
Gene ID: 103028554
Gene Symbol: nop2
Alias: cb164|im:6893299|sb:cb164|si:dkey-91i17.1
Full Name: NOP2 nucleolar protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14287 bases
Position: chr10:9922451-9936737
Accession: 103028554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035357	Methyltr_RsmB-F	PF01189.17	7.7e-78	1	1
ENSAMXP00000030077	Methyltr_RsmB-F	PF01189.17	8.3e-78	1	1
ENSAMXP00000019547	Methyltr_RsmB-F	PF01189.17	8.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019547	-	4443	XM_007249800	ENSAMXP00000019547	760 (aa)	XP_007249862	W5LI85
ENSAMXT00000032852	-	4347	-	ENSAMXP00000035357	728 (aa)	-	-
ENSAMXT00000048463	-	4643	-	ENSAMXP00000030077	759 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000018985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000018985's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000018985	nop2	95	64.521	ENSAPOG00000023186	nop2	99	60.652	Acanthochromis_polyacanthus
ENSAMXG00000018985	nop2	72	84.848	ENSAMEG00000014268	-	73	61.316	Ailuropoda_melanoleuca
ENSAMXG00000018985	nop2	99	64.481	ENSACIG00000011803	nop2	99	64.468	Amphilophus_citrinellus
ENSAMXG00000018985	nop2	99	62.500	ENSAPEG00000011152	nop2	99	63.192	Amphiprion_percula
ENSAMXG00000018985	nop2	80	61.695	ENSACAG00000006397	-	91	59.297	Anolis_carolinensis
ENSAMXG00000018985	nop2	91	57.400	ENSBTAG00000014733	NOP2	77	58.559	Bos_taurus
ENSAMXG00000018985	nop2	53	57.922	WBGene00021073	nol-1	63	62.162	Caenorhabditis_elegans
ENSAMXG00000018985	nop2	85	57.872	ENSCAFG00000015034	NOP2	84	55.887	Canis_familiaris
ENSAMXG00000018985	nop2	89	57.103	ENSCAFG00020002884	-	84	56.304	Canis_lupus_dingo
ENSAMXG00000018985	nop2	91	56.727	ENSCHIG00000018560	-	72	61.221	Capra_hircus
ENSAMXG00000018985	nop2	91	69.565	ENSTSYG00000006030	-	74	57.846	Carlito_syrichta
ENSAMXG00000018985	nop2	55	74.185	ENSCAPG00000011953	-	55	75.711	Cavia_aperea
ENSAMXG00000018985	nop2	79	62.314	ENSCPOG00000020690	-	73	61.488	Cavia_porcellus
ENSAMXG00000018985	nop2	80	60.870	ENSCLAG00000014440	-	80	59.476	Chinchilla_lanigera
ENSAMXG00000018985	nop2	76	73.913	ENSCSAG00000010484	-	77	59.724	Chlorocebus_sabaeus
ENSAMXG00000018985	nop2	59	78.788	ENSCPBG00000027725	-	85	78.788	Chrysemys_picta_bellii
ENSAMXG00000018985	nop2	63	63.020	ENSCING00000008548	-	98	53.038	Ciona_intestinalis
ENSAMXG00000018985	nop2	76	73.913	ENSCANG00000038803	-	94	61.066	Colobus_angolensis_palliatus
ENSAMXG00000018985	nop2	93	55.798	ENSCGRG00001020970	Nop2	73	61.794	Cricetulus_griseus_chok1gshd
ENSAMXG00000018985	nop2	93	55.798	ENSCGRG00000015782	Nop2	73	61.794	Cricetulus_griseus_crigri
ENSAMXG00000018985	nop2	99	58.630	ENSCSEG00000020126	nop2	99	59.014	Cynoglossus_semilaevis
ENSAMXG00000018985	nop2	99	63.508	ENSCVAG00000001162	nop2	99	62.214	Cyprinodon_variegatus
ENSAMXG00000018985	nop2	99	69.100	ENSDARG00000043304	nop2	99	67.355	Danio_rerio
ENSAMXG00000018985	nop2	90	55.047	ENSDNOG00000001133	-	89	55.299	Dasypus_novemcinctus
ENSAMXG00000018985	nop2	62	59.692	FBgn0033741	CG8545	59	51.865	Drosophila_melanogaster
ENSAMXG00000018985	nop2	50	73.770	ENSEBUG00000009820	nop2	61	77.545	Eptatretus_burgeri
ENSAMXG00000018985	nop2	82	61.310	ENSEASG00005016153	-	73	60.899	Equus_asinus_asinus
ENSAMXG00000018985	nop2	82	60.184	ENSECAG00000012639	NOP2	72	60.797	Equus_caballus
ENSAMXG00000018985	nop2	61	64.944	ENSEEUG00000011692	-	63	64.189	Erinaceus_europaeus
ENSAMXG00000018985	nop2	98	65.960	ENSELUG00000017384	nop2	99	65.280	Esox_lucius
ENSAMXG00000018985	nop2	76	67.391	ENSFCAG00000006876	-	78	57.016	Felis_catus
ENSAMXG00000018985	nop2	75	65.880	ENSFALG00000004797	-	85	61.698	Ficedula_albicollis
ENSAMXG00000018985	nop2	75	67.824	ENSFHEG00000014327	nop2	94	65.196	Fundulus_heteroclitus
ENSAMXG00000018985	nop2	64	77.778	ENSGMOG00000011005	nop2	100	77.778	Gadus_morhua
ENSAMXG00000018985	nop2	66	68.553	ENSGALG00000037807	-	84	66.457	Gallus_gallus
ENSAMXG00000018985	nop2	64	76.609	ENSGACG00000010317	nop2	100	75.210	Gasterosteus_aculeatus
ENSAMXG00000018985	nop2	81	60.366	ENSGAGG00000001438	-	94	57.826	Gopherus_agassizii
ENSAMXG00000018985	nop2	82	60.187	ENSGGOG00000001926	NOP2	94	62.097	Gorilla_gorilla
ENSAMXG00000018985	nop2	76	59.964	ENSHBUG00000014908	nop2	100	53.590	Haplochromis_burtoni
ENSAMXG00000018985	nop2	99	62.421	ENSHCOG00000017852	nop2	91	63.989	Hippocampus_comes
ENSAMXG00000018985	nop2	95	71.721	ENSIPUG00000008198	nop2	98	71.819	Ictalurus_punctatus
ENSAMXG00000018985	nop2	99	64.020	ENSLBEG00000007281	nop2	99	63.985	Labrus_bergylta
ENSAMXG00000018985	nop2	73	66.551	ENSLOCG00000007050	nop2	100	66.667	Lepisosteus_oculatus
ENSAMXG00000018985	nop2	81	62.540	ENSLAFG00000002784	-	72	63.333	Loxodonta_africana
ENSAMXG00000018985	nop2	99	65.179	ENSMAMG00000001909	nop2	99	65.179	Mastacembelus_armatus
ENSAMXG00000018985	nop2	99	59.014	ENSMZEG00005017552	nop2	100	61.429	Maylandia_zebra
ENSAMXG00000018985	nop2	78	63.167	ENSMGAG00000014082	-	99	68.116	Meleagris_gallopavo
ENSAMXG00000018985	nop2	80	61.660	ENSMICG00000006570	-	71	61.895	Microcebus_murinus
ENSAMXG00000018985	nop2	89	57.324	ENSMOCG00000017237	Nop2	87	55.571	Microtus_ochrogaster
ENSAMXG00000018985	nop2	78	58.070	ENSMODG00000018077	-	82	58.373	Monodelphis_domestica
ENSAMXG00000018985	nop2	89	58.087	ENSMUSG00000038279	Nop2	86	57.003	Mus_musculus
ENSAMXG00000018985	nop2	83	58.728	ENSMPUG00000016865	-	73	59.683	Mustela_putorius_furo
ENSAMXG00000018985	nop2	60	84.848	ENSMLUG00000014333	-	54	84.848	Myotis_lucifugus
ENSAMXG00000018985	nop2	78	62.625	ENSNGAG00000019010	Nop2	78	57.273	Nannospalax_galili
ENSAMXG00000018985	nop2	76	62.254	ENSNBRG00000001113	nop2	99	55.455	Neolamprologus_brichardi
ENSAMXG00000018985	nop2	82	60.781	ENSNLEG00000004242	-	94	62.136	Nomascus_leucogenys
ENSAMXG00000018985	nop2	78	61.301	ENSMEUG00000015287	-	87	61.275	Notamacropus_eugenii
ENSAMXG00000018985	nop2	66	84.848	ENSOPRG00000003412	-	51	84.848	Ochotona_princeps
ENSAMXG00000018985	nop2	99	62.109	ENSONIG00000012896	nop2	99	61.089	Oreochromis_niloticus
ENSAMXG00000018985	nop2	80	60.606	ENSOCUG00000008203	-	73	61.765	Oryctolagus_cuniculus
ENSAMXG00000018985	nop2	99	63.486	ENSORLG00020005484	nop2	99	63.857	Oryzias_latipes_hni
ENSAMXG00000018985	nop2	78	80.000	ENSOMEG00000012751	nop2	89	79.630	Oryzias_melastigma
ENSAMXG00000018985	nop2	85	76.087	ENSOARG00000007641	-	78	57.143	Ovis_aries
ENSAMXG00000018985	nop2	84	67.391	ENSPPRG00000012300	-	85	55.234	Panthera_pardus
ENSAMXG00000018985	nop2	84	67.391	ENSPTIG00000020543	-	85	55.830	Panthera_tigris_altaica
ENSAMXG00000018985	nop2	76	73.913	ENSPANG00000024426	-	94	62.149	Papio_anubis
ENSAMXG00000018985	nop2	78	61.920	ENSPSIG00000016127	-	99	60.759	Pelodiscus_sinensis
ENSAMXG00000018985	nop2	78	64.441	ENSPEMG00000013138	Nop2	73	62.791	Peromyscus_maniculatus_bairdii
ENSAMXG00000018985	nop2	54	75.318	ENSPMAG00000009402	nop2	97	75.711	Petromyzon_marinus
ENSAMXG00000018985	nop2	78	58.862	ENSPCIG00000001788	-	78	58.766	Phascolarctos_cinereus
ENSAMXG00000018985	nop2	91	64.306	ENSPFOG00000013054	nop2	94	64.664	Poecilia_formosa
ENSAMXG00000018985	nop2	98	63.601	ENSPLAG00000005975	nop2	99	62.791	Poecilia_latipinna
ENSAMXG00000018985	nop2	91	64.060	ENSPMEG00000016775	nop2	99	62.500	Poecilia_mexicana
ENSAMXG00000018985	nop2	70	70.254	ENSPREG00000010428	nop2	73	69.450	Poecilia_reticulata
ENSAMXG00000018985	nop2	82	59.438	ENSPPYG00000004191	-	77	59.938	Pongo_abelii
ENSAMXG00000018985	nop2	89	57.730	ENSPCAG00000007033	-	69	60.454	Procavia_capensis
ENSAMXG00000018985	nop2	69	83.249	ENSPVAG00000012572	-	62	83.249	Pteropus_vampyrus
ENSAMXG00000018985	nop2	99	58.115	ENSPNYG00000023163	nop2	100	58.246	Pundamilia_nyererei
ENSAMXG00000018985	nop2	99	78.748	ENSPNAG00000019880	nop2	99	78.618	Pygocentrus_nattereri
ENSAMXG00000018985	nop2	78	62.938	ENSRNOG00000018453	Nop2	74	61.794	Rattus_norvegicus
ENSAMXG00000018985	nop2	79	73.913	ENSRROG00000041019	-	94	61.228	Rhinopithecus_roxellana
ENSAMXG00000018985	nop2	51	60.372	YNL061W	NOP2	57	62.429	Saccharomyces_cerevisiae
ENSAMXG00000018985	nop2	81	59.400	ENSSBOG00000034622	-	80	58.806	Saimiri_boliviensis_boliviensis
ENSAMXG00000018985	nop2	66	84.848	ENSSHAG00000015028	-	99	57.609	Sarcophilus_harrisii
ENSAMXG00000018985	nop2	92	66.056	ENSSFOG00015002458	nop2	99	62.842	Scleropages_formosus
ENSAMXG00000018985	nop2	99	64.764	ENSSMAG00000011738	nop2	99	63.648	Scophthalmus_maximus
ENSAMXG00000018985	nop2	61	60.256	ENSSARG00000004520	-	56	80.137	Sorex_araneus
ENSAMXG00000018985	nop2	80	59.615	ENSSPUG00000015240	-	79	76.726	Sphenodon_punctatus
ENSAMXG00000018985	nop2	83	67.134	ENSSPAG00000005491	nop2	99	61.911	Stegastes_partitus
ENSAMXG00000018985	nop2	82	58.959	ENSSSCG00000000696	-	72	65.619	Sus_scrofa
ENSAMXG00000018985	nop2	79	61.047	ENSTGUG00000013336	-	99	58.506	Taeniopygia_guttata
ENSAMXG00000018985	nop2	95	58.149	ENSTRUG00000002011	nop2	99	58.213	Takifugu_rubripes
ENSAMXG00000018985	nop2	81	68.760	ENSTNIG00000008046	nop2	100	63.821	Tetraodon_nigroviridis
ENSAMXG00000018985	nop2	78	60.784	ENSTTRG00000016100	-	69	58.481	Tursiops_truncatus
ENSAMXG00000018985	nop2	75	84.848	ENSUAMG00000016105	-	64	68.750	Ursus_americanus
ENSAMXG00000018985	nop2	75	84.848	ENSUMAG00000007220	-	64	68.750	Ursus_maritimus
ENSAMXG00000018985	nop2	82	60.095	ENSVVUG00000011466	-	80	60.190	Vulpes_vulpes
ENSAMXG00000018985	nop2	77	57.958	ENSXETG00000011515	nop2	99	57.561	Xenopus_tropicalis
ENSAMXG00000018985	nop2	91	65.690	ENSXMAG00000011483	nop2	99	61.062	Xiphophorus_maculatus