EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019028 (Gene tree)
Gene ID: -
Gene Symbol: rreb1a
Alias: id:ibd1338|si:ch211-266d19.3
Full Name: ras responsive element binding protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 32070 bases
Position: chr10:4120445-4152514
Accession: 103037027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	1	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	2	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	3	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	4	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	5	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	6	7
ENSAMXP00000019594	zf-C2H2	PF00096.26	5.1e-38	7	7
ENSAMXP00000019594	zf-met	PF12874.7	3.6e-12	1	2
ENSAMXP00000019594	zf-met	PF12874.7	3.6e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019594	-	4659	XM_015602815	ENSAMXP00000019594	1552 (aa)	XP_015458301	W5LID2

Gene Model

Click here to download ENSAMXG00000019028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019028	rreb1a	94	48.203	ENSAMXG00000015314	rreb1b	96	47.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019028	rreb1a	94	45.559	ENSG00000124782	RREB1	99	67.470	Homo_sapiens
ENSAMXG00000019028	rreb1a	99	46.825	ENSAPLG00000004726	RREB1	100	46.754	Anas_platyrhynchos
ENSAMXG00000019028	rreb1a	99	44.381	ENSACAG00000000520	RREB1	100	44.055	Anolis_carolinensis
ENSAMXG00000019028	rreb1a	95	53.229	ENSANAG00000029040	RREB1	95	51.903	Aotus_nancymaae
ENSAMXG00000019028	rreb1a	95	53.174	ENSCJAG00000021358	RREB1	96	52.096	Callithrix_jacchus
ENSAMXG00000019028	rreb1a	98	44.554	ENSCAFG00000009527	RREB1	93	53.452	Canis_familiaris
ENSAMXG00000019028	rreb1a	96	44.795	ENSCAFG00020013260	RREB1	98	45.150	Canis_lupus_dingo
ENSAMXG00000019028	rreb1a	95	52.917	ENSCCAG00000021905	RREB1	96	51.700	Cebus_capucinus
ENSAMXG00000019028	rreb1a	94	46.233	ENSCATG00000043662	RREB1	95	46.780	Cercocebus_atys
ENSAMXG00000019028	rreb1a	94	44.641	ENSCSAG00000007376	RREB1	95	44.832	Chlorocebus_sabaeus
ENSAMXG00000019028	rreb1a	99	47.312	ENSCPBG00000008709	RREB1	100	47.224	Chrysemys_picta_bellii
ENSAMXG00000019028	rreb1a	94	46.969	ENSCANG00000032835	RREB1	95	46.703	Colobus_angolensis_palliatus
ENSAMXG00000019028	rreb1a	95	53.649	ENSCSEG00000018342	rreb1a	87	53.793	Cynoglossus_semilaevis
ENSAMXG00000019028	rreb1a	99	63.232	ENSDARG00000063701	rreb1a	99	69.194	Danio_rerio
ENSAMXG00000019028	rreb1a	99	45.929	ENSDORG00000006979	Rreb1	99	47.976	Dipodomys_ordii
ENSAMXG00000019028	rreb1a	96	53.099	ENSEASG00005012054	RREB1	94	52.381	Equus_asinus_asinus
ENSAMXG00000019028	rreb1a	96	52.789	ENSECAG00000018169	RREB1	94	52.174	Equus_caballus
ENSAMXG00000019028	rreb1a	99	46.284	ENSFALG00000013231	RREB1	96	45.763	Ficedula_albicollis
ENSAMXG00000019028	rreb1a	93	41.800	ENSFDAG00000004213	RREB1	92	42.911	Fukomys_damarensis
ENSAMXG00000019028	rreb1a	99	46.460	ENSGALG00000012799	RREB1	94	54.031	Gallus_gallus
ENSAMXG00000019028	rreb1a	96	49.020	ENSGAGG00000002213	RREB1	100	49.020	Gopherus_agassizii
ENSAMXG00000019028	rreb1a	94	45.790	ENSGGOG00000004561	RREB1	95	46.318	Gorilla_gorilla
ENSAMXG00000019028	rreb1a	95	53.328	ENSLBEG00000013512	rreb1a	99	52.922	Labrus_bergylta
ENSAMXG00000019028	rreb1a	90	47.334	ENSLACG00000009283	RREB1	97	46.830	Latimeria_chalumnae
ENSAMXG00000019028	rreb1a	99	53.186	ENSLOCG00000011702	rreb1b	96	54.085	Lepisosteus_oculatus
ENSAMXG00000019028	rreb1a	99	45.143	ENSLAFG00000005300	RREB1	93	52.273	Loxodonta_africana
ENSAMXG00000019028	rreb1a	89	53.605	ENSMFAG00000000389	RREB1	95	46.481	Macaca_fascicularis
ENSAMXG00000019028	rreb1a	94	46.080	ENSMMUG00000007852	RREB1	95	46.481	Macaca_mulatta
ENSAMXG00000019028	rreb1a	89	53.605	ENSMNEG00000038556	RREB1	95	46.424	Macaca_nemestrina
ENSAMXG00000019028	rreb1a	94	46.252	ENSMLEG00000040965	RREB1	95	46.825	Mandrillus_leucophaeus
ENSAMXG00000019028	rreb1a	99	47.094	ENSMGAG00000003910	RREB1	100	46.209	Meleagris_gallopavo
ENSAMXG00000019028	rreb1a	96	53.347	ENSMICG00000003683	RREB1	99	50.980	Microcebus_murinus
ENSAMXG00000019028	rreb1a	99	43.522	ENSMODG00000009892	RREB1	99	43.980	Monodelphis_domestica
ENSAMXG00000019028	rreb1a	99	43.039	ENSMPUG00000000558	RREB1	99	49.020	Mustela_putorius_furo
ENSAMXG00000019028	rreb1a	99	44.400	ENSMLUG00000013153	RREB1	99	44.274	Myotis_lucifugus
ENSAMXG00000019028	rreb1a	95	52.978	ENSNGAG00000021506	Rreb1	93	52.456	Nannospalax_galili
ENSAMXG00000019028	rreb1a	80	57.067	ENSNBRG00000016744	rreb1a	99	54.098	Neolamprologus_brichardi
ENSAMXG00000019028	rreb1a	94	45.763	ENSNLEG00000011554	RREB1	95	46.159	Nomascus_leucogenys
ENSAMXG00000019028	rreb1a	95	49.020	ENSMEUG00000015377	RREB1	99	43.208	Notamacropus_eugenii
ENSAMXG00000019028	rreb1a	94	43.700	ENSOPRG00000001966	RREB1	93	43.268	Ochotona_princeps
ENSAMXG00000019028	rreb1a	91	44.619	ENSODEG00000007124	RREB1	99	42.998	Octodon_degus
ENSAMXG00000019028	rreb1a	97	52.941	ENSOMEG00000001389	rreb1a	100	52.941	Oryzias_melastigma
ENSAMXG00000019028	rreb1a	89	50.980	ENSOGAG00000025755	RREB1	88	50.980	Otolemur_garnettii
ENSAMXG00000019028	rreb1a	89	53.229	ENSPPAG00000037017	RREB1	95	46.327	Pan_paniscus
ENSAMXG00000019028	rreb1a	99	45.074	ENSPPRG00000012144	RREB1	99	45.294	Panthera_pardus
ENSAMXG00000019028	rreb1a	89	53.229	ENSPTRG00000017697	RREB1	95	46.266	Pan_troglodytes
ENSAMXG00000019028	rreb1a	94	46.121	ENSPANG00000019553	RREB1	95	46.691	Papio_anubis
ENSAMXG00000019028	rreb1a	98	54.489	ENSPKIG00000006372	rreb1b	99	54.138	Paramormyrops_kingsleyae
ENSAMXG00000019028	rreb1a	99	46.579	ENSPSIG00000006582	RREB1	94	54.940	Pelodiscus_sinensis
ENSAMXG00000019028	rreb1a	96	51.606	ENSPEMG00000014153	Rreb1	93	51.566	Peromyscus_maniculatus_bairdii
ENSAMXG00000019028	rreb1a	96	49.020	ENSPCIG00000012644	RREB1	100	49.020	Phascolarctos_cinereus
ENSAMXG00000019028	rreb1a	93	44.313	ENSPPYG00000016204	RREB1	94	44.905	Pongo_abelii
ENSAMXG00000019028	rreb1a	98	44.927	ENSPCOG00000014821	RREB1	99	50.980	Propithecus_coquereli
ENSAMXG00000019028	rreb1a	99	42.738	ENSPVAG00000014081	RREB1	99	47.405	Pteropus_vampyrus
ENSAMXG00000019028	rreb1a	99	74.070	ENSPNAG00000000486	rreb1a	96	73.154	Pygocentrus_nattereri
ENSAMXG00000019028	rreb1a	95	53.669	ENSRNOG00000015701	Rreb1	93	53.207	Rattus_norvegicus
ENSAMXG00000019028	rreb1a	94	46.370	ENSRROG00000039603	RREB1	95	46.492	Rhinopithecus_roxellana
ENSAMXG00000019028	rreb1a	95	53.070	ENSSBOG00000025257	RREB1	96	51.648	Saimiri_boliviensis_boliviensis
ENSAMXG00000019028	rreb1a	99	45.746	ENSSHAG00000005295	RREB1	99	50.201	Sarcophilus_harrisii
ENSAMXG00000019028	rreb1a	91	55.110	ENSSFOG00015001117	rreb1b	94	54.651	Scleropages_formosus
ENSAMXG00000019028	rreb1a	99	46.122	ENSSPUG00000007686	RREB1	100	46.301	Sphenodon_punctatus
ENSAMXG00000019028	rreb1a	99	46.104	ENSTGUG00000002309	RREB1	99	47.432	Taeniopygia_guttata
ENSAMXG00000019028	rreb1a	99	43.695	ENSUAMG00000003741	RREB1	99	44.846	Ursus_americanus
ENSAMXG00000019028	rreb1a	99	49.020	ENSVVUG00000005050	RREB1	95	49.020	Vulpes_vulpes
ENSAMXG00000019028	rreb1a	93	46.780	ENSXETG00000015435	rreb1	97	47.122	Xenopus_tropicalis