EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019031 (Gene tree)
Gene ID: 103047438
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 269164 bases
Position: chr10:4205498-4474661
Accession: 103047438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040502	RRM_1	PF00076.22	1.7e-10	1	1
ENSAMXP00000019595	RRM_1	PF00076.22	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019596	-	1782	XM_022673402	ENSAMXP00000019595	292 (aa)	XP_022529123	W5LID3
ENSAMXT00000055457	-	1734	XM_022673407	ENSAMXP00000040502	276 (aa)	XP_022529128	UPI000BBD6722

Gene Model

Click here to download ENSAMXG00000019031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019031	-	100	65.657	ENSAMXG00000032617	-	100	65.657
ENSAMXG00000019031	-	82	51.852	ENSAMXG00000034915	zgc:55733	92	47.751
ENSAMXG00000019031	-	66	50.754	ENSAMXG00000042946	hnrnpc	97	48.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019031	-	100	72.635	ENSAPOG00000008744	-	100	72.635	Acanthochromis_polyacanthus
ENSAMXG00000019031	-	97	67.698	ENSACIG00000007143	-	97	67.698	Amphilophus_citrinellus
ENSAMXG00000019031	-	100	88.699	ENSAOCG00000001605	-	100	88.699	Amphiprion_ocellaris
ENSAMXG00000019031	-	100	72.973	ENSAOCG00000023599	-	100	72.973	Amphiprion_ocellaris
ENSAMXG00000019031	-	97	65.000	ENSATEG00000022219	-	93	69.900	Anabas_testudineus
ENSAMXG00000019031	-	77	88.496	ENSATEG00000023356	-	87	88.938	Anabas_testudineus
ENSAMXG00000019031	-	100	72.391	ENSACLG00000011720	-	100	73.311	Astatotilapia_calliptera
ENSAMXG00000019031	-	100	90.753	ENSACLG00000006949	-	100	90.753	Astatotilapia_calliptera
ENSAMXG00000019031	-	100	66.554	ENSCSEG00000014237	-	100	66.554	Cynoglossus_semilaevis
ENSAMXG00000019031	-	100	71.959	ENSCVAG00000013624	-	100	71.959	Cyprinodon_variegatus
ENSAMXG00000019031	-	100	87.755	ENSCVAG00000018104	-	100	88.095	Cyprinodon_variegatus
ENSAMXG00000019031	-	59	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSAMXG00000019031	-	93	75.265	ENSELUG00000001702	-	96	75.540	Esox_lucius
ENSAMXG00000019031	-	57	76.970	ENSGMOG00000005914	-	100	76.970	Gadus_morhua
ENSAMXG00000019031	-	59	89.017	ENSGACG00000004991	-	92	91.617	Gasterosteus_aculeatus
ENSAMXG00000019031	-	100	90.753	ENSHBUG00000015412	-	100	90.753	Haplochromis_burtoni
ENSAMXG00000019031	-	100	72.973	ENSHBUG00000010040	-	100	72.973	Haplochromis_burtoni
ENSAMXG00000019031	-	100	91.468	ENSIPUG00000000507	ralyl	100	94.198	Ictalurus_punctatus
ENSAMXG00000019031	-	100	88.699	ENSKMAG00000018155	-	100	88.699	Kryptolebias_marmoratus
ENSAMXG00000019031	-	100	70.270	ENSKMAG00000022093	-	100	71.284	Kryptolebias_marmoratus
ENSAMXG00000019031	-	100	90.068	ENSLBEG00000011011	-	100	89.726	Labrus_bergylta
ENSAMXG00000019031	-	100	71.959	ENSLBEG00000012873	-	100	71.959	Labrus_bergylta
ENSAMXG00000019031	-	100	85.959	ENSLOCG00000012787	ralyl	99	85.274	Lepisosteus_oculatus
ENSAMXG00000019031	-	99	70.345	ENSMAMG00000001723	-	97	70.345	Mastacembelus_armatus
ENSAMXG00000019031	-	98	85.911	ENSMZEG00005018748	-	99	85.911	Maylandia_zebra
ENSAMXG00000019031	-	100	72.391	ENSMZEG00005024447	-	100	73.311	Maylandia_zebra
ENSAMXG00000019031	-	97	64.901	ENSMMOG00000020441	-	86	64.000	Mola_mola
ENSAMXG00000019031	-	100	73.311	ENSMALG00000019019	-	78	73.311	Monopterus_albus
ENSAMXG00000019031	-	100	89.420	ENSMALG00000012952	-	100	89.761	Monopterus_albus
ENSAMXG00000019031	-	97	68.385	ENSNBRG00000011206	-	97	68.385	Neolamprologus_brichardi
ENSAMXG00000019031	-	98	85.567	ENSNBRG00000011376	-	99	85.567	Neolamprologus_brichardi
ENSAMXG00000019031	-	100	89.041	ENSORLG00000012719	-	100	89.041	Oryzias_latipes
ENSAMXG00000019031	-	100	70.946	ENSORLG00000017934	-	100	70.608	Oryzias_latipes
ENSAMXG00000019031	-	100	89.041	ENSORLG00020004438	-	100	89.041	Oryzias_latipes_hni
ENSAMXG00000019031	-	100	70.946	ENSORLG00020000082	-	100	70.608	Oryzias_latipes_hni
ENSAMXG00000019031	-	100	70.946	ENSORLG00015004280	-	100	70.608	Oryzias_latipes_hsok
ENSAMXG00000019031	-	100	89.041	ENSORLG00015004727	-	100	89.041	Oryzias_latipes_hsok
ENSAMXG00000019031	-	100	89.726	ENSOMEG00000001170	-	100	89.726	Oryzias_melastigma
ENSAMXG00000019031	-	100	69.595	ENSOMEG00000011821	-	100	69.595	Oryzias_melastigma
ENSAMXG00000019031	-	100	78.157	ENSPKIG00000015926	-	100	78.157	Paramormyrops_kingsleyae
ENSAMXG00000019031	-	99	66.554	ENSPMGG00000009532	-	99	66.554	Periophthalmus_magnuspinnatus
ENSAMXG00000019031	-	80	76.793	ENSPMGG00000014481	-	98	77.966	Periophthalmus_magnuspinnatus
ENSAMXG00000019031	-	97	68.792	ENSPFOG00000006120	-	99	68.333	Poecilia_formosa
ENSAMXG00000019031	-	97	68.382	ENSPLAG00000009877	-	76	67.883	Poecilia_latipinna
ENSAMXG00000019031	-	97	88.112	ENSPLAG00000011323	ralyl	100	88.112	Poecilia_latipinna
ENSAMXG00000019031	-	97	88.112	ENSPMEG00000023847	ralyl	100	88.112	Poecilia_mexicana
ENSAMXG00000019031	-	97	68.382	ENSPMEG00000013624	-	80	67.883	Poecilia_mexicana
ENSAMXG00000019031	-	97	71.777	ENSPREG00000013805	-	100	68.354	Poecilia_reticulata
ENSAMXG00000019031	-	97	87.762	ENSPREG00000001956	ralyl	100	87.762	Poecilia_reticulata
ENSAMXG00000019031	-	98	85.911	ENSPNYG00000003548	-	99	85.911	Pundamilia_nyererei
ENSAMXG00000019031	-	97	68.385	ENSPNYG00000008772	-	97	68.385	Pundamilia_nyererei
ENSAMXG00000019031	-	100	68.493	ENSPNAG00000026098	-	100	68.493	Pygocentrus_nattereri
ENSAMXG00000019031	-	100	96.575	ENSPNAG00000000498	-	88	96.575	Pygocentrus_nattereri
ENSAMXG00000019031	-	97	79.775	ENSSFOG00015004575	-	96	80.150	Scleropages_formosus
ENSAMXG00000019031	-	100	89.456	ENSSFOG00015009401	-	100	89.456	Scleropages_formosus
ENSAMXG00000019031	-	100	89.726	ENSSMAG00000005608	-	100	89.726	Scophthalmus_maximus
ENSAMXG00000019031	-	97	70.877	ENSSMAG00000015907	-	93	70.526	Scophthalmus_maximus
ENSAMXG00000019031	-	100	89.892	ENSSDUG00000007587	-	100	90.253	Seriola_dumerili
ENSAMXG00000019031	-	100	72.973	ENSSDUG00000012473	-	100	72.973	Seriola_dumerili
ENSAMXG00000019031	-	100	72.635	ENSSLDG00000011534	-	100	72.635	Seriola_lalandi_dorsalis
ENSAMXG00000019031	-	100	90.444	ENSSLDG00000020603	-	100	90.785	Seriola_lalandi_dorsalis
ENSAMXG00000019031	-	100	63.356	ENSSPAG00000013858	-	96	64.311	Stegastes_partitus
ENSAMXG00000019031	-	82	76.151	ENSTRUG00000003829	-	95	72.085	Takifugu_rubripes
ENSAMXG00000019031	-	97	68.027	ENSTNIG00000005594	-	99	67.347	Tetraodon_nigroviridis
ENSAMXG00000019031	-	100	71.429	ENSXETG00000017729	ralyl	99	71.769	Xenopus_tropicalis
ENSAMXG00000019031	-	97	85.374	ENSXCOG00000015156	-	93	85.374	Xiphophorus_couchianus
ENSAMXG00000019031	-	100	72.635	ENSXMAG00000007614	-	100	72.635	Xiphophorus_maculatus
ENSAMXG00000019031	-	100	89.493	ENSXMAG00000008396	-	100	89.493	Xiphophorus_maculatus