EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019130 (Gene tree)
Gene ID: 103041701
Gene Symbol: smarcad1b
Alias: si:dkey-76p7.6
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 36920 bases
Position: chr20:16520190-16557109
Accession: 103041701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019709	ResIII	PF04851.15	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000019709	-	4076	XM_007257800	ENSAMXP00000019709	925 (aa)	XP_007257862	W5LIP7

Gene Model

Click here to download ENSAMXG00000019130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019130	smarcad1b	74	67.770	ENSAMXG00000015470	smarcad1a	90	71.205
ENSAMXG00000019130	smarcad1b	58	34.530	ENSAMXG00000002088	hells	84	34.530
ENSAMXG00000019130	smarcad1b	54	38.492	ENSAMXG00000011227	smarca1	50	37.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019130	smarcad1b	85	59.649	ENSG00000163104	SMARCAD1	100	67.953	Homo_sapiens
ENSAMXG00000019130	smarcad1b	87	62.500	ENSAPOG00000011446	smarcad1a	70	68.667	Acanthochromis_polyacanthus
ENSAMXG00000019130	smarcad1b	85	60.150	ENSAMEG00000005844	SMARCAD1	78	59.008	Ailuropoda_melanoleuca
ENSAMXG00000019130	smarcad1b	80	71.787	ENSACIG00000018326	smarcad1a	94	72.083	Amphilophus_citrinellus
ENSAMXG00000019130	smarcad1b	82	72.780	ENSAOCG00000019762	smarcad1a	71	72.780	Amphiprion_ocellaris
ENSAMXG00000019130	smarcad1b	84	72.635	ENSAPEG00000003889	smarcad1a	72	72.635	Amphiprion_percula
ENSAMXG00000019130	smarcad1b	80	72.337	ENSATEG00000015608	smarcad1a	73	72.633	Anabas_testudineus
ENSAMXG00000019130	smarcad1b	85	60.075	ENSAPLG00000004630	SMARCAD1	81	59.375	Anas_platyrhynchos
ENSAMXG00000019130	smarcad1b	89	55.986	ENSACAG00000013554	SMARCAD1	77	58.313	Anolis_carolinensis
ENSAMXG00000019130	smarcad1b	85	60.025	ENSANAG00000020488	SMARCAD1	87	59.433	Aotus_nancymaae
ENSAMXG00000019130	smarcad1b	87	71.965	ENSACLG00000017063	smarcad1a	84	63.170	Astatotilapia_calliptera
ENSAMXG00000019130	smarcad1b	85	59.800	ENSBTAG00000017061	SMARCAD1	78	58.780	Bos_taurus
ENSAMXG00000019130	smarcad1b	70	40.367	WBGene00010845	M03C11.8	63	41.479	Caenorhabditis_elegans
ENSAMXG00000019130	smarcad1b	85	60.025	ENSCJAG00000006778	SMARCAD1	77	59.433	Callithrix_jacchus
ENSAMXG00000019130	smarcad1b	85	60.150	ENSCAFG00000010026	SMARCAD1	79	59.008	Canis_familiaris
ENSAMXG00000019130	smarcad1b	85	60.150	ENSCAFG00020003994	SMARCAD1	91	59.008	Canis_lupus_dingo
ENSAMXG00000019130	smarcad1b	85	59.950	ENSCHIG00000012905	SMARCAD1	78	58.924	Capra_hircus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSTSYG00000002706	SMARCAD1	78	58.717	Carlito_syrichta
ENSAMXG00000019130	smarcad1b	83	52.387	ENSCAPG00000016744	SMARCAD1	83	51.777	Cavia_aperea
ENSAMXG00000019130	smarcad1b	85	59.900	ENSCPOG00000011398	SMARCAD1	76	59.309	Cavia_porcellus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSCCAG00000022264	SMARCAD1	100	68.121	Cebus_capucinus
ENSAMXG00000019130	smarcad1b	85	59.774	ENSCATG00000035663	SMARCAD1	89	59.186	Cercocebus_atys
ENSAMXG00000019130	smarcad1b	85	59.774	ENSCSAG00000004186	SMARCAD1	94	59.186	Chlorocebus_sabaeus
ENSAMXG00000019130	smarcad1b	99	51.919	ENSCPBG00000013203	SMARCAD1	80	56.683	Chrysemys_picta_bellii
ENSAMXG00000019130	smarcad1b	70	50.076	ENSCING00000001688	-	97	50.619	Ciona_intestinalis
ENSAMXG00000019130	smarcad1b	85	59.900	ENSCANG00000003556	SMARCAD1	100	67.953	Colobus_angolensis_palliatus
ENSAMXG00000019130	smarcad1b	85	59.449	ENSCGRG00001015056	Smarcad1	77	58.845	Cricetulus_griseus_chok1gshd
ENSAMXG00000019130	smarcad1b	85	59.449	ENSCGRG00000014087	Smarcad1	77	58.845	Cricetulus_griseus_crigri
ENSAMXG00000019130	smarcad1b	81	68.650	ENSCSEG00000017903	smarcad1a	75	64.953	Cynoglossus_semilaevis
ENSAMXG00000019130	smarcad1b	83	67.954	ENSCSEG00000014419	-	77	67.525	Cynoglossus_semilaevis
ENSAMXG00000019130	smarcad1b	85	61.462	ENSDARG00000014041	smarcad1a	86	60.864	Danio_rerio
ENSAMXG00000019130	smarcad1b	99	65.249	ENSDARG00000073721	smarcad1b	99	66.459	Danio_rerio
ENSAMXG00000019130	smarcad1b	85	59.825	ENSDNOG00000000806	-	79	58.596	Dasypus_novemcinctus
ENSAMXG00000019130	smarcad1b	85	60.652	ENSDORG00000012331	Smarcad1	79	59.179	Dipodomys_ordii
ENSAMXG00000019130	smarcad1b	68	44.479	FBgn0032157	Etl1	84	42.164	Drosophila_melanogaster
ENSAMXG00000019130	smarcad1b	68	46.635	ENSEBUG00000003969	smarcad1a	99	46.178	Eptatretus_burgeri
ENSAMXG00000019130	smarcad1b	85	60.150	ENSEASG00005012382	SMARCAD1	77	62.089	Equus_asinus_asinus
ENSAMXG00000019130	smarcad1b	85	60.150	ENSECAG00000011562	SMARCAD1	78	58.838	Equus_caballus
ENSAMXG00000019130	smarcad1b	97	64.783	ENSELUG00000019154	smarcad1b	92	63.844	Esox_lucius
ENSAMXG00000019130	smarcad1b	87	66.352	ENSELUG00000018535	smarcad1a	83	66.942	Esox_lucius
ENSAMXG00000019130	smarcad1b	85	60.025	ENSFCAG00000003958	SMARCAD1	100	67.953	Felis_catus
ENSAMXG00000019130	smarcad1b	88	59.683	ENSFALG00000006089	SMARCAD1	78	58.888	Ficedula_albicollis
ENSAMXG00000019130	smarcad1b	85	59.649	ENSFDAG00000017027	SMARCAD1	77	59.063	Fukomys_damarensis
ENSAMXG00000019130	smarcad1b	87	71.514	ENSFHEG00000012778	smarcad1a	71	69.565	Fundulus_heteroclitus
ENSAMXG00000019130	smarcad1b	86	65.675	ENSGMOG00000018995	smarcad1a	90	65.105	Gadus_morhua
ENSAMXG00000019130	smarcad1b	86	56.359	ENSGALG00000037339	SMARCAD1	94	55.901	Gallus_gallus
ENSAMXG00000019130	smarcad1b	90	58.488	ENSGAFG00000013498	smarcad1a	67	73.408	Gambusia_affinis
ENSAMXG00000019130	smarcad1b	95	60.312	ENSGACG00000007327	smarcad1a	91	62.843	Gasterosteus_aculeatus
ENSAMXG00000019130	smarcad1b	99	51.616	ENSGAGG00000008582	SMARCAD1	80	56.532	Gopherus_agassizii
ENSAMXG00000019130	smarcad1b	85	59.774	ENSGGOG00000023001	SMARCAD1	77	59.186	Gorilla_gorilla
ENSAMXG00000019130	smarcad1b	87	72.052	ENSHBUG00000011042	smarcad1a	72	71.614	Haplochromis_burtoni
ENSAMXG00000019130	smarcad1b	85	59.774	ENSHGLG00000005070	SMARCAD1	77	59.186	Heterocephalus_glaber_female
ENSAMXG00000019130	smarcad1b	85	59.774	ENSHGLG00100006812	SMARCAD1	77	59.186	Heterocephalus_glaber_male
ENSAMXG00000019130	smarcad1b	77	70.487	ENSHCOG00000007848	smarcad1a	75	63.833	Hippocampus_comes
ENSAMXG00000019130	smarcad1b	100	76.907	ENSIPUG00000022817	smarcad1b	100	75.932	Ictalurus_punctatus
ENSAMXG00000019130	smarcad1b	81	72.300	ENSIPUG00000000242	smarcad1a	89	59.080	Ictalurus_punctatus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSSTOG00000001227	SMARCAD1	77	58.940	Ictidomys_tridecemlineatus
ENSAMXG00000019130	smarcad1b	85	59.774	ENSJJAG00000022342	Smarcad1	77	58.867	Jaculus_jaculus
ENSAMXG00000019130	smarcad1b	79	71.707	ENSKMAG00000021351	smarcad1a	73	67.827	Kryptolebias_marmoratus
ENSAMXG00000019130	smarcad1b	86	69.956	ENSLBEG00000008088	smarcad1a	76	68.263	Labrus_bergylta
ENSAMXG00000019130	smarcad1b	88	64.225	ENSLOCG00000012909	smarcad1a	82	64.329	Lepisosteus_oculatus
ENSAMXG00000019130	smarcad1b	85	58.479	ENSLAFG00000000040	SMARCAD1	78	57.579	Loxodonta_africana
ENSAMXG00000019130	smarcad1b	85	59.649	ENSMFAG00000042606	SMARCAD1	89	59.063	Macaca_fascicularis
ENSAMXG00000019130	smarcad1b	85	59.649	ENSMMUG00000022242	SMARCAD1	89	59.063	Macaca_mulatta
ENSAMXG00000019130	smarcad1b	85	59.649	ENSMNEG00000038117	SMARCAD1	100	67.953	Macaca_nemestrina
ENSAMXG00000019130	smarcad1b	85	59.774	ENSMLEG00000038333	SMARCAD1	100	67.953	Mandrillus_leucophaeus
ENSAMXG00000019130	smarcad1b	85	69.780	ENSMAMG00000000933	smarcad1a	74	69.780	Mastacembelus_armatus
ENSAMXG00000019130	smarcad1b	94	60.808	ENSMZEG00005005203	smarcad1a	84	63.170	Maylandia_zebra
ENSAMXG00000019130	smarcad1b	99	48.290	ENSMGAG00000005577	SMARCAD1	81	55.446	Meleagris_gallopavo
ENSAMXG00000019130	smarcad1b	85	59.799	ENSMAUG00000008417	Smarcad1	79	58.263	Mesocricetus_auratus
ENSAMXG00000019130	smarcad1b	85	59.875	ENSMICG00000009746	SMARCAD1	78	58.852	Microcebus_murinus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSMOCG00000017142	Smarcad1	77	59.091	Microtus_ochrogaster
ENSAMXG00000019130	smarcad1b	86	65.380	ENSMMOG00000000275	smarcad1a	89	74.882	Mola_mola
ENSAMXG00000019130	smarcad1b	99	52.487	ENSMODG00000019268	SMARCAD1	76	59.035	Monodelphis_domestica
ENSAMXG00000019130	smarcad1b	89	57.964	MGP_CAROLIEiJ_G0028458	-	63	58.477	Mus_caroli
ENSAMXG00000019130	smarcad1b	87	58.722	ENSMUSG00000029920	Smarcad1	77	58.477	Mus_musculus
ENSAMXG00000019130	smarcad1b	89	57.964	MGP_PahariEiJ_G0022198	Smarcad1	77	58.600	Mus_pahari
ENSAMXG00000019130	smarcad1b	89	57.844	MGP_SPRETEiJ_G0029462	Smarcad1	77	58.477	Mus_spretus
ENSAMXG00000019130	smarcad1b	85	60.150	ENSMPUG00000002111	SMARCAD1	78	59.008	Mustela_putorius_furo
ENSAMXG00000019130	smarcad1b	85	60.000	ENSMLUG00000000425	SMARCAD1	78	58.495	Myotis_lucifugus
ENSAMXG00000019130	smarcad1b	85	59.649	ENSNGAG00000000810	Smarcad1	78	59.063	Nannospalax_galili
ENSAMXG00000019130	smarcad1b	73	71.386	ENSNBRG00000012749	smarcad1a	86	68.188	Neolamprologus_brichardi
ENSAMXG00000019130	smarcad1b	85	59.774	ENSNLEG00000014225	SMARCAD1	100	67.953	Nomascus_leucogenys
ENSAMXG00000019130	smarcad1b	85	60.025	ENSODEG00000004334	SMARCAD1	77	59.433	Octodon_degus
ENSAMXG00000019130	smarcad1b	68	74.571	ENSONIG00000015059	smarcad1a	83	64.415	Oreochromis_niloticus
ENSAMXG00000019130	smarcad1b	87	58.153	ENSOANG00000013764	SMARCAD1	97	58.323	Ornithorhynchus_anatinus
ENSAMXG00000019130	smarcad1b	85	59.774	ENSOCUG00000017283	SMARCAD1	77	59.186	Oryctolagus_cuniculus
ENSAMXG00000019130	smarcad1b	77	74.233	ENSORLG00000004869	smarcad1a	75	69.124	Oryzias_latipes
ENSAMXG00000019130	smarcad1b	77	74.233	ENSORLG00020020569	smarcad1a	74	68.457	Oryzias_latipes_hni
ENSAMXG00000019130	smarcad1b	77	74.233	ENSORLG00015009045	smarcad1a	71	71.659	Oryzias_latipes_hsok
ENSAMXG00000019130	smarcad1b	79	73.926	ENSOMEG00000023032	smarcad1a	75	67.534	Oryzias_melastigma
ENSAMXG00000019130	smarcad1b	85	59.750	ENSOGAG00000011444	SMARCAD1	77	59.164	Otolemur_garnettii
ENSAMXG00000019130	smarcad1b	85	59.950	ENSOARG00000017851	SMARCAD1	78	58.924	Ovis_aries
ENSAMXG00000019130	smarcad1b	85	59.774	ENSPPAG00000035715	SMARCAD1	77	59.186	Pan_paniscus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSPPRG00000024756	SMARCAD1	100	67.953	Panthera_pardus
ENSAMXG00000019130	smarcad1b	85	59.875	ENSPTIG00000017868	SMARCAD1	78	59.024	Panthera_tigris_altaica
ENSAMXG00000019130	smarcad1b	85	59.774	ENSPTRG00000023126	SMARCAD1	100	67.953	Pan_troglodytes
ENSAMXG00000019130	smarcad1b	85	58.552	ENSPANG00000019757	SMARCAD1	79	57.419	Papio_anubis
ENSAMXG00000019130	smarcad1b	99	53.030	ENSPSIG00000010255	SMARCAD1	76	59.199	Pelodiscus_sinensis
ENSAMXG00000019130	smarcad1b	68	69.315	ENSPMGG00000010735	smarcad1a	95	66.913	Periophthalmus_magnuspinnatus
ENSAMXG00000019130	smarcad1b	83	53.238	ENSPEMG00000001854	Smarcad1	81	50.540	Peromyscus_maniculatus_bairdii
ENSAMXG00000019130	smarcad1b	88	51.671	ENSPMAG00000003516	smarcad1a	80	51.199	Petromyzon_marinus
ENSAMXG00000019130	smarcad1b	86	60.175	ENSPCIG00000008137	SMARCAD1	96	59.800	Phascolarctos_cinereus
ENSAMXG00000019130	smarcad1b	95	73.783	ENSPFOG00000019116	smarcad1a	71	67.033	Poecilia_formosa
ENSAMXG00000019130	smarcad1b	95	73.626	ENSPLAG00000000108	smarcad1a	71	66.896	Poecilia_latipinna
ENSAMXG00000019130	smarcad1b	95	73.783	ENSPMEG00000009155	smarcad1a	71	67.033	Poecilia_mexicana
ENSAMXG00000019130	smarcad1b	95	70.700	ENSPREG00000018185	smarcad1a	76	70.700	Poecilia_reticulata
ENSAMXG00000019130	smarcad1b	85	59.500	ENSPPYG00000014935	SMARCAD1	77	58.918	Pongo_abelii
ENSAMXG00000019130	smarcad1b	74	54.441	ENSPCOG00000020478	SMARCAD1	77	54.441	Propithecus_coquereli
ENSAMXG00000019130	smarcad1b	85	59.548	ENSPVAG00000001760	SMARCAD1	78	58.424	Pteropus_vampyrus
ENSAMXG00000019130	smarcad1b	73	71.091	ENSPNYG00000010087	smarcad1a	81	70.864	Pundamilia_nyererei
ENSAMXG00000019130	smarcad1b	87	62.710	ENSPNAG00000001663	smarcad1a	84	62.230	Pygocentrus_nattereri
ENSAMXG00000019130	smarcad1b	100	84.171	ENSPNAG00000010099	smarcad1b	100	83.316	Pygocentrus_nattereri
ENSAMXG00000019130	smarcad1b	89	57.844	ENSRNOG00000006391	Smarcad1	77	58.477	Rattus_norvegicus
ENSAMXG00000019130	smarcad1b	85	59.774	ENSRBIG00000041989	SMARCAD1	77	59.186	Rhinopithecus_bieti
ENSAMXG00000019130	smarcad1b	85	59.774	ENSRROG00000035309	SMARCAD1	77	59.186	Rhinopithecus_roxellana
ENSAMXG00000019130	smarcad1b	85	60.025	ENSSBOG00000032114	SMARCAD1	100	68.121	Saimiri_boliviensis_boliviensis
ENSAMXG00000019130	smarcad1b	88	59.179	ENSSHAG00000001279	SMARCAD1	79	59.179	Sarcophilus_harrisii
ENSAMXG00000019130	smarcad1b	84	63.903	ENSSFOG00015020909	smarcad1a	100	63.648	Scleropages_formosus
ENSAMXG00000019130	smarcad1b	99	62.907	ENSSFOG00015016814	smarcad1b	96	62.500	Scleropages_formosus
ENSAMXG00000019130	smarcad1b	83	70.827	ENSSMAG00000001326	smarcad1a	75	67.527	Scophthalmus_maximus
ENSAMXG00000019130	smarcad1b	74	71.988	ENSSDUG00000022338	smarcad1a	81	71.698	Seriola_dumerili
ENSAMXG00000019130	smarcad1b	81	70.707	ENSSLDG00000024986	smarcad1a	72	70.418	Seriola_lalandi_dorsalis
ENSAMXG00000019130	smarcad1b	63	67.899	ENSSPUG00000004633	SMARCAD1	99	67.899	Sphenodon_punctatus
ENSAMXG00000019130	smarcad1b	82	72.635	ENSSPAG00000001970	smarcad1a	71	72.344	Stegastes_partitus
ENSAMXG00000019130	smarcad1b	85	60.401	ENSSSCG00000009193	SMARCAD1	96	58.959	Sus_scrofa
ENSAMXG00000019130	smarcad1b	85	59.426	ENSTGUG00000003127	SMARCAD1	100	59.305	Taeniopygia_guttata
ENSAMXG00000019130	smarcad1b	87	66.626	ENSTNIG00000017585	smarcad1a	91	66.504	Tetraodon_nigroviridis
ENSAMXG00000019130	smarcad1b	75	71.032	ENSTBEG00000002789	SMARCAD1	68	71.032	Tupaia_belangeri
ENSAMXG00000019130	smarcad1b	85	59.950	ENSTTRG00000000226	SMARCAD1	80	58.974	Tursiops_truncatus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSUAMG00000022262	SMARCAD1	79	60.238	Ursus_americanus
ENSAMXG00000019130	smarcad1b	85	60.025	ENSUMAG00000004549	SMARCAD1	78	59.046	Ursus_maritimus
ENSAMXG00000019130	smarcad1b	85	59.975	ENSVVUG00000007271	SMARCAD1	95	58.924	Vulpes_vulpes
ENSAMXG00000019130	smarcad1b	84	54.477	ENSXETG00000019214	smarcad1	89	53.972	Xenopus_tropicalis
ENSAMXG00000019130	smarcad1b	84	64.698	ENSXCOG00000005232	smarcad1a	83	68.991	Xiphophorus_couchianus
ENSAMXG00000019130	smarcad1b	90	70.000	ENSXMAG00000015350	smarcad1a	71	67.310	Xiphophorus_maculatus