EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019387 (Gene tree)
Gene ID: 103044519
Gene Symbol: denr
Alias: im:6891640|zgc:113309|zgc:92629
Full Name: density regulated re-initiation and release factor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4416 bases
Position: chr20:1706590-1711005
Accession: 103044519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000019966	SUI1	PF01253.22	1.2e-16	1	1
ENSAMXP00000054559	SUI1	PF01253.22	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047819	-	2703	XM_007250280	ENSAMXP00000054559	201 (aa)	XP_007250342	UPI000BBDDC1C
ENSAMXT00000019966	-	570	-	ENSAMXP00000019966	189 (aa)	-	W5LJF4

Gene Model

Click here to download ENSAMXG00000019387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019387	denr	96	81.771	ENSG00000139726	DENR	93	78.125	Homo_sapiens
ENSAMXG00000019387	denr	100	84.236	ENSAPOG00000021065	denr	100	78.325	Acanthochromis_polyacanthus
ENSAMXG00000019387	denr	97	75.000	ENSAMEG00000014851	DENR	96	75.000	Ailuropoda_melanoleuca
ENSAMXG00000019387	denr	91	89.130	ENSACIG00000007705	denr	100	79.412	Amphilophus_citrinellus
ENSAMXG00000019387	denr	100	84.236	ENSAOCG00000004767	denr	100	78.325	Amphiprion_ocellaris
ENSAMXG00000019387	denr	100	83.744	ENSAPEG00000006323	denr	100	78.325	Amphiprion_percula
ENSAMXG00000019387	denr	100	81.463	ENSATEG00000004198	denr	100	76.098	Anabas_testudineus
ENSAMXG00000019387	denr	91	84.699	ENSAPLG00000003750	DENR	89	80.874	Anas_platyrhynchos
ENSAMXG00000019387	denr	98	79.000	ENSACAG00000016012	DENR	99	76.500	Anolis_carolinensis
ENSAMXG00000019387	denr	90	66.851	ENSANAG00000011753	-	91	64.088	Aotus_nancymaae
ENSAMXG00000019387	denr	96	82.292	ENSANAG00000033479	-	93	78.646	Aotus_nancymaae
ENSAMXG00000019387	denr	100	85.222	ENSACLG00000024786	denr	100	79.310	Astatotilapia_calliptera
ENSAMXG00000019387	denr	97	78.283	ENSBTAG00000032433	DENR	97	75.758	Bos_taurus
ENSAMXG00000019387	denr	97	78.283	ENSBTAG00000049723	DENR	97	75.758	Bos_taurus
ENSAMXG00000019387	denr	89	43.017	WBGene00012932	Y47D3A.21	89	44.633	Caenorhabditis_elegans
ENSAMXG00000019387	denr	77	66.452	ENSCJAG00000042372	-	92	61.935	Callithrix_jacchus
ENSAMXG00000019387	denr	96	82.292	ENSCJAG00000020488	DENR	93	78.646	Callithrix_jacchus
ENSAMXG00000019387	denr	97	79.798	ENSCAFG00000032380	DENR	70	76.263	Canis_familiaris
ENSAMXG00000019387	denr	97	78.788	ENSCAFG00020016334	DENR	97	76.263	Canis_lupus_dingo
ENSAMXG00000019387	denr	97	78.283	ENSCHIG00000025489	DENR	97	75.758	Capra_hircus
ENSAMXG00000019387	denr	96	76.562	ENSTSYG00000035451	-	93	73.958	Carlito_syrichta
ENSAMXG00000019387	denr	96	80.208	ENSTSYG00000028003	-	93	76.562	Carlito_syrichta
ENSAMXG00000019387	denr	87	78.659	ENSCAPG00000002873	DENR	100	77.246	Cavia_aperea
ENSAMXG00000019387	denr	96	79.688	ENSCPOG00000031356	DENR	93	76.042	Cavia_porcellus
ENSAMXG00000019387	denr	99	60.500	ENSCCAG00000033248	-	100	60.500	Cebus_capucinus
ENSAMXG00000019387	denr	92	74.457	ENSCCAG00000026516	-	92	73.370	Cebus_capucinus
ENSAMXG00000019387	denr	92	82.162	ENSCATG00000032375	-	91	79.459	Cercocebus_atys
ENSAMXG00000019387	denr	91	82.514	ENSCLAG00000014586	DENR	90	78.689	Chinchilla_lanigera
ENSAMXG00000019387	denr	83	82.803	ENSCSAG00000002095	DENR	100	79.618	Chlorocebus_sabaeus
ENSAMXG00000019387	denr	91	69.565	ENSCHOG00000011505	DENR	90	69.565	Choloepus_hoffmanni
ENSAMXG00000019387	denr	99	80.597	ENSCPBG00000026018	DENR	99	77.114	Chrysemys_picta_bellii
ENSAMXG00000019387	denr	88	55.307	ENSCING00000022096	-	85	52.688	Ciona_intestinalis
ENSAMXG00000019387	denr	88	52.514	ENSCSAVG00000008066	-	85	50.279	Ciona_savignyi
ENSAMXG00000019387	denr	100	75.862	ENSCGRG00001022427	Denr	100	73.399	Cricetulus_griseus_chok1gshd
ENSAMXG00000019387	denr	100	75.862	ENSCGRG00000014376	Denr	100	73.399	Cricetulus_griseus_crigri
ENSAMXG00000019387	denr	100	86.765	ENSCSEG00000012090	denr	100	80.392	Cynoglossus_semilaevis
ENSAMXG00000019387	denr	100	87.745	ENSCVAG00000006732	denr	99	81.373	Cyprinodon_variegatus
ENSAMXG00000019387	denr	100	90.000	ENSDARG00000037229	denr	100	88.095	Danio_rerio
ENSAMXG00000019387	denr	97	76.263	ENSDNOG00000036413	-	97	73.232	Dasypus_novemcinctus
ENSAMXG00000019387	denr	83	82.803	ENSDNOG00000001447	DENR	100	79.618	Dasypus_novemcinctus
ENSAMXG00000019387	denr	88	48.876	FBgn0030802	DENR	87	46.629	Drosophila_melanogaster
ENSAMXG00000019387	denr	94	66.138	ENSETEG00000013029	DENR	92	63.492	Echinops_telfairi
ENSAMXG00000019387	denr	97	80.303	ENSEASG00005012513	DENR	97	76.768	Equus_asinus_asinus
ENSAMXG00000019387	denr	97	80.303	ENSECAG00000021824	DENR	70	76.768	Equus_caballus
ENSAMXG00000019387	denr	100	87.317	ENSELUG00000002656	denr	100	81.463	Esox_lucius
ENSAMXG00000019387	denr	90	85.000	ENSFCAG00000006126	DENR	88	81.111	Felis_catus
ENSAMXG00000019387	denr	99	79.104	ENSFALG00000009235	DENR	99	77.228	Ficedula_albicollis
ENSAMXG00000019387	denr	96	78.646	ENSFDAG00000016899	-	93	76.042	Fukomys_damarensis
ENSAMXG00000019387	denr	92	62.500	ENSFDAG00000018403	-	92	59.239	Fukomys_damarensis
ENSAMXG00000019387	denr	100	86.139	ENSFHEG00000007729	denr	100	82.178	Fundulus_heteroclitus
ENSAMXG00000019387	denr	100	80.882	ENSGMOG00000017892	denr	100	77.451	Gadus_morhua
ENSAMXG00000019387	denr	99	79.602	ENSGALG00000003795	DENR	90	80.874	Gallus_gallus
ENSAMXG00000019387	denr	100	84.314	ENSGAFG00000004297	denr	100	78.431	Gambusia_affinis
ENSAMXG00000019387	denr	100	80.882	ENSGACG00000015614	denr	100	76.961	Gasterosteus_aculeatus
ENSAMXG00000019387	denr	99	80.597	ENSGAGG00000023819	DENR	99	77.114	Gopherus_agassizii
ENSAMXG00000019387	denr	96	81.771	ENSGGOG00000005562	DENR	93	78.125	Gorilla_gorilla
ENSAMXG00000019387	denr	100	87.745	ENSHBUG00000011606	denr	100	81.863	Haplochromis_burtoni
ENSAMXG00000019387	denr	96	78.646	ENSHGLG00000009606	DENR	93	76.042	Heterocephalus_glaber_female
ENSAMXG00000019387	denr	96	78.646	ENSHGLG00100019201	DENR	93	76.042	Heterocephalus_glaber_male
ENSAMXG00000019387	denr	100	84.653	ENSHCOG00000003310	denr	100	79.703	Hippocampus_comes
ENSAMXG00000019387	denr	100	89.524	ENSIPUG00000016199	denr	100	86.667	Ictalurus_punctatus
ENSAMXG00000019387	denr	96	81.250	ENSSTOG00000014128	DENR	93	77.604	Ictidomys_tridecemlineatus
ENSAMXG00000019387	denr	79	67.901	ENSJJAG00000013822	-	92	63.580	Jaculus_jaculus
ENSAMXG00000019387	denr	100	75.369	ENSJJAG00000012558	-	100	72.906	Jaculus_jaculus
ENSAMXG00000019387	denr	90	82.222	ENSJJAG00000008721	-	93	77.778	Jaculus_jaculus
ENSAMXG00000019387	denr	100	86.567	ENSKMAG00000008452	denr	100	82.587	Kryptolebias_marmoratus
ENSAMXG00000019387	denr	91	89.674	ENSLBEG00000021674	denr	100	80.392	Labrus_bergylta
ENSAMXG00000019387	denr	69	81.538	ENSLACG00000022178	DENR	77	93.069	Latimeria_chalumnae
ENSAMXG00000019387	denr	100	87.192	ENSLOCG00000005501	denr	100	83.251	Lepisosteus_oculatus
ENSAMXG00000019387	denr	98	76.000	ENSLAFG00000031728	DENR	99	75.500	Loxodonta_africana
ENSAMXG00000019387	denr	92	82.162	ENSMFAG00000038312	DENR	91	79.459	Macaca_fascicularis
ENSAMXG00000019387	denr	92	82.162	ENSMMUG00000046801	DENR	91	79.459	Macaca_mulatta
ENSAMXG00000019387	denr	65	68.852	ENSMNEG00000030944	-	79	61.491	Macaca_nemestrina
ENSAMXG00000019387	denr	92	83.243	ENSMNEG00000034844	-	91	79.459	Macaca_nemestrina
ENSAMXG00000019387	denr	92	82.162	ENSMLEG00000032214	DENR	91	79.459	Mandrillus_leucophaeus
ENSAMXG00000019387	denr	91	88.525	ENSMAMG00000011386	denr	100	79.310	Mastacembelus_armatus
ENSAMXG00000019387	denr	100	85.222	ENSMZEG00005007982	denr	100	79.310	Maylandia_zebra
ENSAMXG00000019387	denr	99	79.602	ENSMGAG00000003720	DENR	89	80.874	Meleagris_gallopavo
ENSAMXG00000019387	denr	100	67.488	ENSMAUG00000020940	Denr	100	64.734	Mesocricetus_auratus
ENSAMXG00000019387	denr	96	82.292	ENSMICG00000046263	DENR	98	75.743	Microcebus_murinus
ENSAMXG00000019387	denr	100	76.355	ENSMOCG00000019231	Denr	100	73.892	Microtus_ochrogaster
ENSAMXG00000019387	denr	100	85.340	ENSMMOG00000009357	denr	100	79.058	Mola_mola
ENSAMXG00000019387	denr	99	79.104	ENSMODG00000012302	DENR	99	75.622	Monodelphis_domestica
ENSAMXG00000019387	denr	91	91.803	ENSMALG00000018416	denr	100	81.773	Monopterus_albus
ENSAMXG00000019387	denr	100	78.818	MGP_CAROLIEiJ_G0027737	Denr	100	74.877	Mus_caroli
ENSAMXG00000019387	denr	100	78.818	ENSMUSG00000023106	Denr	100	74.877	Mus_musculus
ENSAMXG00000019387	denr	92	83.784	MGP_PahariEiJ_G0024317	Denr	91	79.459	Mus_pahari
ENSAMXG00000019387	denr	100	78.818	MGP_SPRETEiJ_G0028735	Denr	100	74.877	Mus_spretus
ENSAMXG00000019387	denr	97	76.263	ENSMPUG00000001826	DENR	71	76.263	Mustela_putorius_furo
ENSAMXG00000019387	denr	97	76.768	ENSMLUG00000002088	DENR	98	76.263	Myotis_lucifugus
ENSAMXG00000019387	denr	100	76.847	ENSNGAG00000013775	Denr	100	74.384	Nannospalax_galili
ENSAMXG00000019387	denr	100	87.685	ENSNBRG00000018898	denr	100	81.773	Neolamprologus_brichardi
ENSAMXG00000019387	denr	96	81.771	ENSNLEG00000029880	DENR	93	78.125	Nomascus_leucogenys
ENSAMXG00000019387	denr	96	60.417	ENSODEG00000006563	-	91	60.417	Octodon_degus
ENSAMXG00000019387	denr	87	78.182	ENSODEG00000005378	-	87	75.301	Octodon_degus
ENSAMXG00000019387	denr	95	76.562	ENSODEG00000009408	-	91	72.917	Octodon_degus
ENSAMXG00000019387	denr	100	87.255	ENSONIG00000015319	denr	100	81.373	Oreochromis_niloticus
ENSAMXG00000019387	denr	90	81.111	ENSOANG00000011417	-	89	81.111	Ornithorhynchus_anatinus
ENSAMXG00000019387	denr	96	70.833	ENSOCUG00000027291	-	97	67.708	Oryctolagus_cuniculus
ENSAMXG00000019387	denr	96	81.771	ENSOCUG00000008150	-	93	78.125	Oryctolagus_cuniculus
ENSAMXG00000019387	denr	100	85.075	ENSORLG00000001495	denr	100	77.612	Oryzias_latipes
ENSAMXG00000019387	denr	100	85.075	ENSORLG00020015485	denr	100	77.612	Oryzias_latipes_hni
ENSAMXG00000019387	denr	100	84.577	ENSORLG00015002890	denr	100	77.114	Oryzias_latipes_hsok
ENSAMXG00000019387	denr	100	85.075	ENSOMEG00000021836	denr	100	78.607	Oryzias_melastigma
ENSAMXG00000019387	denr	91	84.153	ENSOGAG00000012426	DENR	90	80.328	Otolemur_garnettii
ENSAMXG00000019387	denr	97	74.500	ENSOARG00000008511	DENR	97	74.500	Ovis_aries
ENSAMXG00000019387	denr	96	75.127	ENSPPAG00000031425	DENR	93	74.619	Pan_paniscus
ENSAMXG00000019387	denr	90	85.000	ENSPPRG00000009664	-	88	81.111	Panthera_pardus
ENSAMXG00000019387	denr	90	57.778	ENSPPRG00000020005	-	93	57.222	Panthera_pardus
ENSAMXG00000019387	denr	98	66.162	ENSPTIG00000021643	-	98	62.121	Panthera_tigris_altaica
ENSAMXG00000019387	denr	90	84.444	ENSPTIG00000014761	-	88	80.556	Panthera_tigris_altaica
ENSAMXG00000019387	denr	96	81.771	ENSPTRG00000005584	DENR	93	78.125	Pan_troglodytes
ENSAMXG00000019387	denr	87	81.818	ENSPANG00000035364	-	100	80.952	Papio_anubis
ENSAMXG00000019387	denr	92	82.162	ENSPANG00000030074	-	91	79.459	Papio_anubis
ENSAMXG00000019387	denr	100	84.236	ENSPKIG00000001107	denr	100	75.490	Paramormyrops_kingsleyae
ENSAMXG00000019387	denr	98	79.000	ENSPSIG00000008249	DENR	94	76.500	Pelodiscus_sinensis
ENSAMXG00000019387	denr	94	80.447	ENSPMGG00000017214	denr	72	77.901	Periophthalmus_magnuspinnatus
ENSAMXG00000019387	denr	92	81.622	ENSPEMG00000006521	-	91	77.838	Peromyscus_maniculatus_bairdii
ENSAMXG00000019387	denr	85	72.353	ENSPMAG00000008589	denr	88	72.353	Petromyzon_marinus
ENSAMXG00000019387	denr	99	79.104	ENSPCIG00000022523	DENR	99	75.622	Phascolarctos_cinereus
ENSAMXG00000019387	denr	100	87.685	ENSPFOG00000023419	denr	100	81.773	Poecilia_formosa
ENSAMXG00000019387	denr	100	87.685	ENSPLAG00000014807	denr	100	81.773	Poecilia_latipinna
ENSAMXG00000019387	denr	100	82.297	ENSPMEG00000020699	denr	100	76.555	Poecilia_mexicana
ENSAMXG00000019387	denr	100	87.685	ENSPREG00000016795	denr	100	81.773	Poecilia_reticulata
ENSAMXG00000019387	denr	97	75.879	ENSPCAG00000012039	DENR	97	72.362	Procavia_capensis
ENSAMXG00000019387	denr	96	82.292	ENSPCOG00000015933	DENR	98	75.743	Propithecus_coquereli
ENSAMXG00000019387	denr	97	77.889	ENSPVAG00000001291	DENR	97	74.372	Pteropus_vampyrus
ENSAMXG00000019387	denr	100	87.685	ENSPNYG00000003833	denr	100	81.773	Pundamilia_nyererei
ENSAMXG00000019387	denr	100	94.059	ENSPNAG00000021662	denr	100	94.059	Pygocentrus_nattereri
ENSAMXG00000019387	denr	100	76.617	ENSRNOG00000001106	Denr	100	75.622	Rattus_norvegicus
ENSAMXG00000019387	denr	92	57.838	ENSRBIG00000041357	DENR	89	58.378	Rhinopithecus_bieti
ENSAMXG00000019387	denr	92	82.162	ENSRROG00000044446	DENR	91	79.459	Rhinopithecus_roxellana
ENSAMXG00000019387	denr	79	30.357	YJR014W	TMA22	85	31.765	Saccharomyces_cerevisiae
ENSAMXG00000019387	denr	92	48.913	ENSSBOG00000024171	-	92	50.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000019387	denr	74	77.027	ENSSBOG00000030149	-	79	72.297	Saimiri_boliviensis_boliviensis
ENSAMXG00000019387	denr	98	74.372	ENSSHAG00000012064	DENR	98	73.869	Sarcophilus_harrisii
ENSAMXG00000019387	denr	100	88.670	ENSSFOG00015018494	denr	100	82.759	Scleropages_formosus
ENSAMXG00000019387	denr	91	87.363	ENSSMAG00000010563	denr	99	75.743	Scophthalmus_maximus
ENSAMXG00000019387	denr	100	86.765	ENSSDUG00000023551	denr	100	80.882	Seriola_dumerili
ENSAMXG00000019387	denr	100	86.275	ENSSLDG00000011430	denr	100	80.392	Seriola_lalandi_dorsalis
ENSAMXG00000019387	denr	85	82.609	ENSSARG00000004446	DENR	100	79.503	Sorex_araneus
ENSAMXG00000019387	denr	97	79.293	ENSSPUG00000012205	DENR	97	75.758	Sphenodon_punctatus
ENSAMXG00000019387	denr	100	87.745	ENSSPAG00000019529	denr	100	81.863	Stegastes_partitus
ENSAMXG00000019387	denr	97	78.788	ENSSSCG00000009788	-	97	76.263	Sus_scrofa
ENSAMXG00000019387	denr	99	76.617	ENSTGUG00000005674	DENR	99	74.752	Taeniopygia_guttata
ENSAMXG00000019387	denr	100	84.817	ENSTRUG00000020621	denr	100	79.058	Takifugu_rubripes
ENSAMXG00000019387	denr	100	85.222	ENSTNIG00000013510	denr	99	79.803	Tetraodon_nigroviridis
ENSAMXG00000019387	denr	92	69.110	ENSTTRG00000015856	DENR	93	65.445	Tursiops_truncatus
ENSAMXG00000019387	denr	83	53.846	ENSUAMG00000011200	-	85	51.479	Ursus_americanus
ENSAMXG00000019387	denr	97	79.798	ENSUAMG00000003667	-	97	76.263	Ursus_americanus
ENSAMXG00000019387	denr	97	79.798	ENSUMAG00000005166	-	97	76.263	Ursus_maritimus
ENSAMXG00000019387	denr	83	52.663	ENSUMAG00000023866	-	85	51.479	Ursus_maritimus
ENSAMXG00000019387	denr	69	89.231	ENSVPAG00000011472	DENR	52	97.030	Vicugna_pacos
ENSAMXG00000019387	denr	97	79.798	ENSVVUG00000028097	DENR	70	76.263	Vulpes_vulpes
ENSAMXG00000019387	denr	98	78.894	ENSXETG00000005791	denr	88	80.000	Xenopus_tropicalis
ENSAMXG00000019387	denr	100	86.911	ENSXCOG00000017611	denr	100	80.628	Xiphophorus_couchianus
ENSAMXG00000019387	denr	100	87.685	ENSXMAG00000019247	denr	100	81.773	Xiphophorus_maculatus