EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000019418 (Gene tree)
Gene ID
-
Gene Symbol
zgc:171971
Alias
-
Full Name
zgc:171971
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
10206 bases
Position
chr4:23397038-23407243
Accession
ZDB-GENE-070928-37
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000020000RNA_pol_Rpc4PF05132.144.4e-2611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000020000-1086-ENSAMXP00000020000361 (aa)-W5LJI8
Gene Model
Click here to download ENSAMXG00000019418's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019418's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000019418zgc:1719718740.548ENSAMXG00000010079polr3d9738.791
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000019418zgc:1719719443.590ENSG00000168495POLR3D9054.464Homo_sapiens
ENSAMXG00000019418zgc:1719719339.523ENSAPOG00000012197polr3d9238.441Acanthochromis_polyacanthus
ENSAMXG00000019418zgc:1719719453.665ENSAPOG00000017634zgc:1719719251.832Acanthochromis_polyacanthus
ENSAMXG00000019418zgc:1719719443.041ENSAMEG00000003221POLR3D9643.152Ailuropoda_melanoleuca
ENSAMXG00000019418zgc:1719718949.861ENSACIG00000003707zgc:1719719349.734Amphilophus_citrinellus
ENSAMXG00000019418zgc:1719718741.360ENSACIG00000017832polr3d9140.401Amphilophus_citrinellus
ENSAMXG00000019418zgc:1719719339.892ENSAOCG00000005037polr3d9238.859Amphiprion_ocellaris
ENSAMXG00000019418zgc:1719719456.201ENSAOCG00000007733zgc:1719719253.826Amphiprion_ocellaris
ENSAMXG00000019418zgc:1719719340.369ENSAPEG00000013751polr3d9238.814Amphiprion_percula
ENSAMXG00000019418zgc:1719719455.673ENSAPEG00000016107zgc:1719719253.562Amphiprion_percula
ENSAMXG00000019418zgc:1719719250.685ENSATEG00000023125zgc:1719719549.735Anabas_testudineus
ENSAMXG00000019418zgc:1719719640.568ENSATEG00000023119polr3d9939.276Anabas_testudineus
ENSAMXG00000019418zgc:1719718239.942ENSAPLG00000014393POLR3D9936.950Anas_platyrhynchos
ENSAMXG00000019418zgc:1719718339.420ENSACAG00000010592POLR3D9239.718Anolis_carolinensis
ENSAMXG00000019418zgc:1719719443.333ENSANAG00000030023POLR3D9742.377Aotus_nancymaae
ENSAMXG00000019418zgc:1719718740.960ENSACLG00000010147polr3d9040.227Astatotilapia_calliptera
ENSAMXG00000019418zgc:1719719355.858ENSACLG00000000074zgc:1719719455.586Astatotilapia_calliptera
ENSAMXG00000019418zgc:1719719442.784ENSBTAG00000010036POLR3D9741.860Bos_taurus
ENSAMXG00000019418zgc:1719719443.358ENSCJAG00000020278POLR3D9042.377Callithrix_jacchus
ENSAMXG00000019418zgc:1719719443.077ENSCAFG00000009455POLR3D9742.894Canis_familiaris
ENSAMXG00000019418zgc:1719719443.077ENSCAFG00020013027POLR3D9742.894Canis_lupus_dingo
ENSAMXG00000019418zgc:1719719442.564ENSCHIG00000012279POLR3D9742.119Capra_hircus
ENSAMXG00000019418zgc:1719719443.445ENSTSYG00000009055POLR3D9742.377Carlito_syrichta
ENSAMXG00000019418zgc:1719718141.429ENSCAPG00000010394POLR3D9740.000Cavia_aperea
ENSAMXG00000019418zgc:1719719443.073ENSCPOG00000003679POLR3D9741.860Cavia_porcellus
ENSAMXG00000019418zgc:1719719443.333ENSCCAG00000019817POLR3D9742.377Cebus_capucinus
ENSAMXG00000019418zgc:1719719443.445ENSCATG00000025950POLR3D9742.228Cercocebus_atys
ENSAMXG00000019418zgc:1719719443.108ENSCLAG00000014993POLR3D9741.860Chinchilla_lanigera
ENSAMXG00000019418zgc:1719719443.188ENSCSAG00000016525POLR3D9741.969Chlorocebus_sabaeus
ENSAMXG00000019418zgc:1719717065.789ENSCHOG00000000228POLR3D6465.789Choloepus_hoffmanni
ENSAMXG00000019418zgc:1719719640.852ENSCPBG00000001313POLR3D9940.852Chrysemys_picta_bellii
ENSAMXG00000019418zgc:1719718735.542ENSCING00000008141-8932.733Ciona_intestinalis
ENSAMXG00000019418zgc:1719718735.152ENSCSAVG00000007119-8933.636Ciona_savignyi
ENSAMXG00000019418zgc:1719719443.188ENSCANG00000043589POLR3D9742.228Colobus_angolensis_palliatus
ENSAMXG00000019418zgc:1719719444.361ENSCGRG00001010339Polr3d9742.929Cricetulus_griseus_chok1gshd
ENSAMXG00000019418zgc:1719719444.361ENSCGRG00000003956Polr3d9742.929Cricetulus_griseus_crigri
ENSAMXG00000019418zgc:1719719154.006ENSCSEG00000015509zgc:1719719153.116Cynoglossus_semilaevis
ENSAMXG00000019418zgc:1719718840.336ENSCSEG00000008123polr3d9039.548Cynoglossus_semilaevis
ENSAMXG00000019418zgc:1719718947.706ENSCVAG00000009078-9147.866Cyprinodon_variegatus
ENSAMXG00000019418zgc:1719719339.426ENSCVAG00000020687polr3d9738.259Cyprinodon_variegatus
ENSAMXG00000019418zgc:1719719040.000ENSDARG00000104516polr3d9539.726Danio_rerio
ENSAMXG00000019418zgc:1719719968.766ENSDARG00000042054zgc:1719719868.241Danio_rerio
ENSAMXG00000019418zgc:1719719441.935ENSDNOG00000013488POLR3D9741.582Dasypus_novemcinctus
ENSAMXG00000019418zgc:1719719443.358ENSDORG00000011174Polr3d9742.119Dipodomys_ordii
ENSAMXG00000019418zgc:1719719542.455ENSETEG00000016516POLR3D9741.026Echinops_telfairi
ENSAMXG00000019418zgc:1719716933.442ENSEBUG00000014414polr3d8932.143Eptatretus_burgeri
ENSAMXG00000019418zgc:1719719441.538ENSEASG00005018824POLR3D9741.085Equus_asinus_asinus
ENSAMXG00000019418zgc:1719719442.564ENSECAG00000025090-9742.119Equus_caballus
ENSAMXG00000019418zgc:1719719442.564ENSEEUG00000007632POLR3D9542.216Erinaceus_europaeus
ENSAMXG00000019418zgc:1719719361.326ENSELUG00000017642zgc:1719719160.773Esox_lucius
ENSAMXG00000019418zgc:1719718741.144ENSELUG00000016978polr3d9939.949Esox_lucius
ENSAMXG00000019418zgc:1719719542.967ENSFCAG00000005346POLR3D9742.784Felis_catus
ENSAMXG00000019418zgc:1719718242.308ENSFALG00000010907POLR3D9941.543Ficedula_albicollis
ENSAMXG00000019418zgc:1719719443.223ENSFDAG00000010144POLR3D9742.010Fukomys_damarensis
ENSAMXG00000019418zgc:1719718648.680ENSFHEG00000003803-9446.883Fundulus_heteroclitus
ENSAMXG00000019418zgc:1719719440.933ENSFHEG00000000508polr3d9840.000Fundulus_heteroclitus
ENSAMXG00000019418zgc:1719719253.731ENSGMOG00000015819zgc:1719719154.328Gadus_morhua
ENSAMXG00000019418zgc:1719718940.659ENSGMOG00000006293polr3d9939.945Gadus_morhua
ENSAMXG00000019418zgc:1719718341.399ENSGALG00000032501-5941.724Gallus_gallus
ENSAMXG00000019418zgc:1719718947.851ENSGAFG00000009259zgc:1719719645.646Gambusia_affinis
ENSAMXG00000019418zgc:1719719439.378ENSGAFG00000010268polr3d9638.400Gambusia_affinis
ENSAMXG00000019418zgc:1719719352.073ENSGACG00000015436zgc:1719719451.036Gasterosteus_aculeatus
ENSAMXG00000019418zgc:1719719640.513ENSGACG00000011126polr3d9938.974Gasterosteus_aculeatus
ENSAMXG00000019418zgc:1719719641.353ENSGAGG00000023229POLR3D9940.852Gopherus_agassizii
ENSAMXG00000019418zgc:1719719543.577ENSGGOG00000007302POLR3D9842.386Gorilla_gorilla
ENSAMXG00000019418zgc:1719719354.178ENSHBUG00000020493zgc:1719719954.627Haplochromis_burtoni
ENSAMXG00000019418zgc:1719718740.960ENSHBUG00000012288polr3d9040.227Haplochromis_burtoni
ENSAMXG00000019418zgc:1719719444.186ENSHGLG00000015415POLR3D9642.820Heterocephalus_glaber_female
ENSAMXG00000019418zgc:1719719444.186ENSHGLG00100014950POLR3D9642.820Heterocephalus_glaber_male
ENSAMXG00000019418zgc:1719718846.377ENSHCOG00000018819-8846.686Hippocampus_comes
ENSAMXG00000019418zgc:1719719641.582ENSHCOG00000002228polr3d9940.000Hippocampus_comes
ENSAMXG00000019418zgc:1719719570.604ENSIPUG00000008608zgc:1719719570.219Ictalurus_punctatus
ENSAMXG00000019418zgc:1719719640.351ENSIPUG00000003480polr3d9939.141Ictalurus_punctatus
ENSAMXG00000019418zgc:1719719443.846ENSSTOG00000016519POLR3D9743.152Ictidomys_tridecemlineatus
ENSAMXG00000019418zgc:1719719443.325ENSJJAG00000006743Polr3d9642.857Jaculus_jaculus
ENSAMXG00000019418zgc:1719719639.896ENSKMAG00000005145polr3d9140.227Kryptolebias_marmoratus
ENSAMXG00000019418zgc:1719718738.920ENSLBEG00000003430polr3d9037.216Labrus_bergylta
ENSAMXG00000019418zgc:1719719355.135ENSLBEG00000009545zgc:1719719353.784Labrus_bergylta
ENSAMXG00000019418zgc:1719719643.467ENSLACG00000016654POLR3D9943.687Latimeria_chalumnae
ENSAMXG00000019418zgc:1719719462.022ENSLOCG00000006467zgc:1719719860.053Lepisosteus_oculatus
ENSAMXG00000019418zgc:1719719641.206ENSLOCG00000016080polr3d9940.506Lepisosteus_oculatus
ENSAMXG00000019418zgc:1719719442.967ENSLAFG00000001562POLR3D9542.147Loxodonta_africana
ENSAMXG00000019418zgc:1719719443.445ENSMFAG00000029141POLR3D9742.228Macaca_fascicularis
ENSAMXG00000019418zgc:1719719444.216ENSMMUG00000023226POLR3D9743.005Macaca_mulatta
ENSAMXG00000019418zgc:1719719443.445ENSMNEG00000039410POLR3D9742.228Macaca_nemestrina
ENSAMXG00000019418zgc:1719719443.445ENSMLEG00000031413POLR3D9742.228Mandrillus_leucophaeus
ENSAMXG00000019418zgc:1719719254.076ENSMAMG00000020617zgc:1719719351.902Mastacembelus_armatus
ENSAMXG00000019418zgc:1719719438.400ENSMAMG00000008914polr3d9939.175Mastacembelus_armatus
ENSAMXG00000019418zgc:1719718740.960ENSMZEG00005011442polr3d9040.227Maylandia_zebra
ENSAMXG00000019418zgc:1719719355.858ENSMZEG00005003175zgc:1719719455.586Maylandia_zebra
ENSAMXG00000019418zgc:1719719443.609ENSMAUG00000006844Polr3d9742.526Mesocricetus_auratus
ENSAMXG00000019418zgc:1719719442.857ENSMICG00000001049POLR3D9742.119Microcebus_murinus
ENSAMXG00000019418zgc:1719719444.332ENSMOCG00000005195Polr3d9742.929Microtus_ochrogaster
ENSAMXG00000019418zgc:1719719640.779ENSMMOG00000013845polr3d9940.104Mola_mola
ENSAMXG00000019418zgc:1719719043.316ENSMODG00000009491POLR3D9641.779Monodelphis_domestica
ENSAMXG00000019418zgc:1719719640.863ENSMALG00000002928polr3d9339.394Monopterus_albus
ENSAMXG00000019418zgc:1719719654.856ENSMALG00000005659zgc:1719719652.987Monopterus_albus
ENSAMXG00000019418zgc:1719719443.358MGP_CAROLIEiJ_G0019481Polr3d9742.636Mus_caroli
ENSAMXG00000019418zgc:1719719443.358ENSMUSG00000000776Polr3d9742.636Mus_musculus
ENSAMXG00000019418zgc:1719719442.172MGP_PahariEiJ_G0030498Polr3d9739.796Mus_pahari
ENSAMXG00000019418zgc:1719719443.860MGP_SPRETEiJ_G0020373Polr3d9743.152Mus_spretus
ENSAMXG00000019418zgc:1719719442.784ENSMPUG00000003653POLR3D9742.894Mustela_putorius_furo
ENSAMXG00000019418zgc:1719719442.356ENSMLUG00000002109POLR3D9741.344Myotis_lucifugus
ENSAMXG00000019418zgc:1719719443.609ENSNGAG00000013872Polr3d9742.677Nannospalax_galili
ENSAMXG00000019418zgc:1719718740.395ENSNBRG00000019106polr3d9139.776Neolamprologus_brichardi
ENSAMXG00000019418zgc:1719718151.592ENSNBRG00000022951zgc:1719718652.229Neolamprologus_brichardi
ENSAMXG00000019418zgc:1719719643.577ENSMEUG00000000465POLR3D9942.132Notamacropus_eugenii
ENSAMXG00000019418zgc:1719719543.500ENSOPRG00000013146POLR3D9742.784Ochotona_princeps
ENSAMXG00000019418zgc:1719719443.367ENSODEG00000005884POLR3D9742.674Octodon_degus
ENSAMXG00000019418zgc:1719719155.068ENSONIG00000007280zgc:1719719253.699Oreochromis_niloticus
ENSAMXG00000019418zgc:1719719639.744ENSONIG00000010634polr3d9040.227Oreochromis_niloticus
ENSAMXG00000019418zgc:1719719241.710ENSOANG00000010776POLR3D9541.316Ornithorhynchus_anatinus
ENSAMXG00000019418zgc:1719719543.038ENSOCUG00000017410POLR3D9842.386Oryctolagus_cuniculus
ENSAMXG00000019418zgc:1719718742.735ENSORLG00000011583polr3d9241.595Oryzias_latipes
ENSAMXG00000019418zgc:1719719042.192ENSORLG00020005668polr3d9341.096Oryzias_latipes_hni
ENSAMXG00000019418zgc:1719719041.758ENSORLG00015020291polr3d8938.920Oryzias_latipes_hsok
ENSAMXG00000019418zgc:1719718740.845ENSOMEG00000010120polr3d9040.793Oryzias_melastigma
ENSAMXG00000019418zgc:1719719443.702ENSOGAG00000004912POLR3D9742.746Otolemur_garnettii
ENSAMXG00000019418zgc:1719719443.077ENSOARG00000010372-7742.377Ovis_aries
ENSAMXG00000019418zgc:1719716932.331ENSOARG00000009142-9831.818Ovis_aries
ENSAMXG00000019418zgc:1719719443.590ENSPPAG00000029591POLR3D9742.377Pan_paniscus
ENSAMXG00000019418zgc:1719719542.967ENSPPRG00000022827POLR3D9742.784Panthera_pardus
ENSAMXG00000019418zgc:1719719443.041ENSPTIG00000018239POLR3D9542.932Panthera_tigris_altaica
ENSAMXG00000019418zgc:1719719443.590ENSPTRG00000020056POLR3D9742.377Pan_troglodytes
ENSAMXG00000019418zgc:1719719443.445ENSPANG00000009440POLR3D9742.228Papio_anubis
ENSAMXG00000019418zgc:1719719641.397ENSPKIG00000006727polr3d9939.698Paramormyrops_kingsleyae
ENSAMXG00000019418zgc:1719719663.395ENSPKIG00000025283zgc:1719719561.436Paramormyrops_kingsleyae
ENSAMXG00000019418zgc:1719719640.299ENSPSIG00000006113POLR3D9939.401Pelodiscus_sinensis
ENSAMXG00000019418zgc:1719719640.052ENSPMGG00000021658polr3d9940.157Periophthalmus_magnuspinnatus
ENSAMXG00000019418zgc:1719719444.110ENSPEMG00000023314Polr3d9742.677Peromyscus_maniculatus_bairdii
ENSAMXG00000019418zgc:1719719037.722ENSPMAG00000001455polr3d9438.636Petromyzon_marinus
ENSAMXG00000019418zgc:1719719643.325ENSPCIG00000012699POLR3D9942.132Phascolarctos_cinereus
ENSAMXG00000019418zgc:1719718948.997ENSPFOG00000011089zgc:1719719047.701Poecilia_formosa
ENSAMXG00000019418zgc:1719719437.500ENSPFOG00000012698polr3d9837.343Poecilia_formosa
ENSAMXG00000019418zgc:1719718744.311ENSPLAG00000003645zgc:1719718543.544Poecilia_latipinna
ENSAMXG00000019418zgc:1719718739.093ENSPLAG00000008149polr3d9637.600Poecilia_latipinna
ENSAMXG00000019418zgc:1719718739.266ENSPMEG00000002702polr3d9637.766Poecilia_mexicana
ENSAMXG00000019418zgc:1719718948.997ENSPMEG00000016953zgc:1719719047.564Poecilia_mexicana
ENSAMXG00000019418zgc:1719719538.817ENSPREG00000007593polr3d9638.421Poecilia_reticulata
ENSAMXG00000019418zgc:1719718947.458ENSPREG00000003755-9046.857Poecilia_reticulata
ENSAMXG00000019418zgc:1719719443.590ENSPPYG00000018419POLR3D9742.377Pongo_abelii
ENSAMXG00000019418zgc:1719719439.241ENSPCAG00000001971POLR3D9739.119Procavia_capensis
ENSAMXG00000019418zgc:1719719443.358ENSPCOG00000028134POLR3D9742.636Propithecus_coquereli
ENSAMXG00000019418zgc:1719719443.188ENSPVAG00000009873POLR3D9742.377Pteropus_vampyrus
ENSAMXG00000019418zgc:1719718740.678ENSPNYG00000016306polr3d9039.943Pundamilia_nyererei
ENSAMXG00000019418zgc:1719718949.577ENSPNYG00000008902zgc:1719718552.424Pundamilia_nyererei
ENSAMXG00000019418zgc:1719718740.934ENSPNAG00000022324polr3d9939.295Pygocentrus_nattereri
ENSAMXG00000019418zgc:1719719981.167ENSPNAG00000018934zgc:1719719881.167Pygocentrus_nattereri
ENSAMXG00000019418zgc:1719719443.358ENSRNOG00000010028Polr3d9742.424Rattus_norvegicus
ENSAMXG00000019418zgc:1719719443.445ENSRBIG00000035406POLR3D9742.228Rhinopithecus_bieti
ENSAMXG00000019418zgc:1719719443.445ENSRROG00000037278POLR3D9742.228Rhinopithecus_roxellana
ENSAMXG00000019418zgc:1719719443.333ENSSBOG00000024956POLR3D9742.377Saimiri_boliviensis_boliviensis
ENSAMXG00000019418zgc:1719718242.478ENSSHAG00000018257POLR3D9941.124Sarcophilus_harrisii
ENSAMXG00000019418zgc:1719719640.441ENSSFOG00015010611polr3d9939.409Scleropages_formosus
ENSAMXG00000019418zgc:1719718361.280ENSSFOG00015011547zgc:1719719459.880Scleropages_formosus
ENSAMXG00000019418zgc:1719719040.811ENSSMAG00000006271polr3d9340.274Scophthalmus_maximus
ENSAMXG00000019418zgc:1719719353.117ENSSMAG00000001465zgc:1719719151.366Scophthalmus_maximus
ENSAMXG00000019418zgc:1719719254.692ENSSDUG00000016019zgc:1719719252.815Seriola_dumerili
ENSAMXG00000019418zgc:1719719640.967ENSSDUG00000020718polr3d9939.948Seriola_dumerili
ENSAMXG00000019418zgc:1719719641.221ENSSLDG00000009643polr3d9939.948Seriola_lalandi_dorsalis
ENSAMXG00000019418zgc:1719719254.692ENSSLDG00000015968zgc:1719719252.815Seriola_lalandi_dorsalis
ENSAMXG00000019418zgc:1719719440.657ENSSARG00000012844POLR3D9739.896Sorex_araneus
ENSAMXG00000019418zgc:1719719642.065ENSSPUG00000000719POLR3D9942.424Sphenodon_punctatus
ENSAMXG00000019418zgc:1719719454.167ENSSPAG00000010384zgc:1719719451.944Stegastes_partitus
ENSAMXG00000019418zgc:1719718740.503ENSSPAG00000023326polr3d9140.227Stegastes_partitus
ENSAMXG00000019418zgc:1719719443.299ENSSSCG00000009622POLR3D9642.597Sus_scrofa
ENSAMXG00000019418zgc:1719719639.535ENSTRUG00000003555polr3d9939.535Takifugu_rubripes
ENSAMXG00000019418zgc:1719719438.583ENSTNIG00000006282polr3d9838.786Tetraodon_nigroviridis
ENSAMXG00000019418zgc:1719719442.010ENSTTRG00000012745POLR3D9741.602Tursiops_truncatus
ENSAMXG00000019418zgc:1719718541.160ENSUAMG00000026868POLR3D9539.889Ursus_americanus
ENSAMXG00000019418zgc:1719719443.577ENSUMAG00000005099POLR3D9742.894Ursus_maritimus
ENSAMXG00000019418zgc:1719719443.077ENSVVUG00000005290POLR3D9742.894Vulpes_vulpes
ENSAMXG00000019418zgc:1719719341.558ENSXETG00000010534polr3d9640.885Xenopus_tropicalis
ENSAMXG00000019418zgc:1719719040.517ENSXCOG00000015872polr3d9339.655Xiphophorus_couchianus
ENSAMXG00000019418zgc:1719719039.344ENSXMAG00000001872polr3d9337.912Xiphophorus_maculatus
ENSAMXG00000019418zgc:1719718948.424ENSXMAG00000014555-9047.278Xiphophorus_maculatus

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