EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019493 (Gene tree)
Gene ID: 103022402
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 34908 bases
Position: chr10:30816564-30851471
Accession: 103022402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020073	RIO1	PF01163.22	8.6e-05	1	1
ENSAMXP00000042307	RIO1	PF01163.22	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020073	-	2924	XM_022673943	ENSAMXP00000020073	726 (aa)	XP_022529664	W5LJR1
ENSAMXT00000056694	-	3041	XM_022673941	ENSAMXP00000042307	765 (aa)	XP_022529662	UPI000BBDA50F

Gene Model

Click here to download ENSAMXG00000019493's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04020	Calcium signaling pathway	KEGG
amex04270	Vascular smooth muscle contraction	KEGG
amex04371	Apelin signaling pathway	KEGG
amex04510	Focal adhesion	KEGG
amex04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019493	-	92	60.805	ENSAPOG00000019520	-	80	59.286	Acanthochromis_polyacanthus
ENSAMXG00000019493	-	95	52.967	ENSAPOG00000023231	mylk5	76	56.391	Acanthochromis_polyacanthus
ENSAMXG00000019493	-	90	60.486	ENSACIG00000024477	-	78	60.486	Amphilophus_citrinellus
ENSAMXG00000019493	-	96	59.744	ENSAOCG00000024465	-	78	60.882	Amphiprion_ocellaris
ENSAMXG00000019493	-	91	56.006	ENSAOCG00000014130	mylk5	83	55.572	Amphiprion_ocellaris
ENSAMXG00000019493	-	95	53.690	ENSAPEG00000017851	mylk5	81	55.590	Amphiprion_percula
ENSAMXG00000019493	-	97	59.830	ENSAPEG00000014652	-	83	61.176	Amphiprion_percula
ENSAMXG00000019493	-	99	53.625	ENSATEG00000002426	mylk5	78	57.470	Anabas_testudineus
ENSAMXG00000019493	-	99	51.871	ENSACLG00000003301	mylk5	86	54.393	Astatotilapia_calliptera
ENSAMXG00000019493	-	94	56.788	ENSACLG00000007583	-	81	58.815	Astatotilapia_calliptera
ENSAMXG00000019493	-	99	51.565	ENSCSEG00000017281	mylk5	99	51.307	Cynoglossus_semilaevis
ENSAMXG00000019493	-	90	56.183	ENSCVAG00000022813	mylk5	80	56.183	Cyprinodon_variegatus
ENSAMXG00000019493	-	91	59.063	ENSCVAG00000022136	-	81	56.738	Cyprinodon_variegatus
ENSAMXG00000019493	-	99	55.769	ENSFHEG00000010974	-	80	57.659	Fundulus_heteroclitus
ENSAMXG00000019493	-	92	55.988	ENSFHEG00000011638	-	82	55.988	Fundulus_heteroclitus
ENSAMXG00000019493	-	92	56.138	ENSGAFG00000000269	mylk5	78	55.267	Gambusia_affinis
ENSAMXG00000019493	-	90	54.217	ENSGACG00000008527	mylk5	99	54.217	Gasterosteus_aculeatus
ENSAMXG00000019493	-	90	59.636	ENSHBUG00000016459	-	79	59.726	Haplochromis_burtoni
ENSAMXG00000019493	-	90	57.055	ENSHBUG00000002257	mylk5	78	56.430	Haplochromis_burtoni
ENSAMXG00000019493	-	97	55.430	ENSHCOG00000015710	-	99	52.918	Hippocampus_comes
ENSAMXG00000019493	-	91	56.928	ENSIPUG00000012659	mylk5	81	56.024	Ictalurus_punctatus
ENSAMXG00000019493	-	98	53.631	ENSKMAG00000019605	mylk5	82	53.631	Kryptolebias_marmoratus
ENSAMXG00000019493	-	99	54.167	ENSKMAG00000016742	-	88	54.167	Kryptolebias_marmoratus
ENSAMXG00000019493	-	96	54.635	ENSLBEG00000003526	mylk5	80	56.231	Labrus_bergylta
ENSAMXG00000019493	-	91	61.538	ENSLBEG00000004115	-	79	61.538	Labrus_bergylta
ENSAMXG00000019493	-	97	53.955	ENSMAMG00000000610	mylk5	77	55.420	Mastacembelus_armatus
ENSAMXG00000019493	-	99	52.000	ENSMZEG00005022663	mylk5	82	54.533	Maylandia_zebra
ENSAMXG00000019493	-	90	55.219	ENSMMOG00000020584	mylk5	80	55.219	Mola_mola
ENSAMXG00000019493	-	90	60.976	ENSMALG00000022416	-	72	61.433	Monopterus_albus
ENSAMXG00000019493	-	94	53.912	ENSMALG00000004945	mylk5	77	55.838	Monopterus_albus
ENSAMXG00000019493	-	63	62.144	ENSONIG00000019875	-	99	62.144	Oreochromis_niloticus
ENSAMXG00000019493	-	89	57.686	ENSONIG00000001203	mylk5	99	62.144	Oreochromis_niloticus
ENSAMXG00000019493	-	90	59.459	ENSONIG00000016230	-	82	58.120	Oreochromis_niloticus
ENSAMXG00000019493	-	90	54.217	ENSPFOG00000013597	mylk5	77	54.217	Poecilia_formosa
ENSAMXG00000019493	-	90	54.198	ENSPLAG00000023779	mylk5	82	51.739	Poecilia_latipinna
ENSAMXG00000019493	-	92	55.090	ENSPMEG00000023897	mylk5	82	51.799	Poecilia_mexicana
ENSAMXG00000019493	-	83	56.146	ENSPREG00000009707	mylk5	82	56.397	Poecilia_reticulata
ENSAMXG00000019493	-	91	59.668	ENSPREG00000003222	-	78	58.529	Poecilia_reticulata
ENSAMXG00000019493	-	92	58.955	ENSPNYG00000019509	-	81	70.070	Pundamilia_nyererei
ENSAMXG00000019493	-	99	50.194	ENSPNYG00000010046	mylk5	83	52.639	Pundamilia_nyererei
ENSAMXG00000019493	-	93	58.754	ENSSFOG00015004885	-	93	58.894	Scleropages_formosus
ENSAMXG00000019493	-	96	53.672	ENSSMAG00000006784	mylk5	81	53.531	Scophthalmus_maximus
ENSAMXG00000019493	-	90	62.614	ENSSMAG00000020328	-	78	61.756	Scophthalmus_maximus
ENSAMXG00000019493	-	94	60.610	ENSSDUG00000020847	-	81	61.248	Seriola_dumerili
ENSAMXG00000019493	-	94	60.320	ENSSLDG00000019897	-	80	60.813	Seriola_lalandi_dorsalis
ENSAMXG00000019493	-	85	60.193	ENSSPAG00000019068	-	75	60.884	Stegastes_partitus
ENSAMXG00000019493	-	97	52.550	ENSSPAG00000020815	mylk5	86	52.975	Stegastes_partitus
ENSAMXG00000019493	-	97	50.487	ENSTRUG00000015150	mylk5	77	53.245	Takifugu_rubripes
ENSAMXG00000019493	-	82	55.207	ENSTNIG00000011699	mylk5	99	55.207	Tetraodon_nigroviridis
ENSAMXG00000019493	-	57	61.848	ENSTNIG00000004928	-	99	61.848	Tetraodon_nigroviridis
ENSAMXG00000019493	-	90	58.079	ENSXCOG00000005927	-	86	71.269	Xiphophorus_couchianus
ENSAMXG00000019493	-	92	55.838	ENSXMAG00000007789	mylk5	77	55.838	Xiphophorus_maculatus
ENSAMXG00000019493	-	74	63.148	ENSXMAG00000015589	-	71	61.279	Xiphophorus_maculatus