EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019494 (Gene tree)
Gene ID: 103032108
Gene Symbol: exd3
Alias: si:ch211-183l21.3
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 90627 bases
Position: chr20:5044292-5134918
Accession: 103032108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050761	DNA_pol_A_exo1	PF01612.20	4.5e-19	1	1
ENSAMXP00000020085	DNA_pol_A_exo1	PF01612.20	4.7e-19	1	1
ENSAMXP00000036849	DNA_pol_A_exo1	PF01612.20	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033053	-	2538	-	ENSAMXP00000050761	845 (aa)	-	-
ENSAMXT00000020085	-	2660	-	ENSAMXP00000020085	871 (aa)	-	W5LJS3
ENSAMXT00000056406	-	3161	XM_022680931	ENSAMXP00000036849	884 (aa)	XP_022536652	UPI000BBD906B

Gene Model

Click here to download ENSAMXG00000019494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019494	exd3	97	40.791	ENSG00000187609	EXD3	96	40.791	Homo_sapiens
ENSAMXG00000019494	exd3	97	52.111	ENSAPOG00000015520	exd3	98	56.106	Acanthochromis_polyacanthus
ENSAMXG00000019494	exd3	99	53.995	ENSACIG00000005561	exd3	94	53.995	Amphilophus_citrinellus
ENSAMXG00000019494	exd3	99	55.219	ENSAOCG00000007721	exd3	98	55.381	Amphiprion_ocellaris
ENSAMXG00000019494	exd3	99	55.443	ENSAPEG00000007019	exd3	99	55.605	Amphiprion_percula
ENSAMXG00000019494	exd3	98	53.829	ENSATEG00000019941	exd3	99	53.681	Anabas_testudineus
ENSAMXG00000019494	exd3	84	45.971	ENSAPLG00000015358	EXD3	99	45.418	Anas_platyrhynchos
ENSAMXG00000019494	exd3	98	38.769	ENSANAG00000019674	EXD3	96	38.497	Aotus_nancymaae
ENSAMXG00000019494	exd3	99	54.321	ENSACLG00000021922	exd3	99	54.372	Astatotilapia_calliptera
ENSAMXG00000019494	exd3	95	41.626	ENSBTAG00000023788	EXD3	98	39.814	Bos_taurus
ENSAMXG00000019494	exd3	98	39.269	ENSCJAG00000013170	EXD3	96	39.155	Callithrix_jacchus
ENSAMXG00000019494	exd3	98	40.745	ENSCAFG00000019444	EXD3	98	41.037	Canis_familiaris
ENSAMXG00000019494	exd3	95	41.434	ENSCAFG00020003171	EXD3	91	41.088	Canis_lupus_dingo
ENSAMXG00000019494	exd3	98	39.101	ENSCCAG00000027996	EXD3	96	39.101	Cebus_capucinus
ENSAMXG00000019494	exd3	97	41.250	ENSCSAG00000016661	EXD3	96	40.707	Chlorocebus_sabaeus
ENSAMXG00000019494	exd3	85	44.517	ENSCPBG00000011686	EXD3	89	44.619	Chrysemys_picta_bellii
ENSAMXG00000019494	exd3	93	30.566	ENSCING00000002195	-	98	30.566	Ciona_intestinalis
ENSAMXG00000019494	exd3	54	39.164	ENSCSAVG00000005704	-	93	38.889	Ciona_savignyi
ENSAMXG00000019494	exd3	97	40.363	ENSCANG00000040692	EXD3	96	40.363	Colobus_angolensis_palliatus
ENSAMXG00000019494	exd3	100	51.852	ENSCSEG00000000750	exd3	99	51.736	Cynoglossus_semilaevis
ENSAMXG00000019494	exd3	99	53.906	ENSCVAG00000011560	exd3	99	54.199	Cyprinodon_variegatus
ENSAMXG00000019494	exd3	98	63.968	ENSDARG00000063140	exd3	100	63.968	Danio_rerio
ENSAMXG00000019494	exd3	95	42.857	ENSEASG00005016023	EXD3	96	42.506	Equus_asinus_asinus
ENSAMXG00000019494	exd3	97	42.303	ENSECAG00000017546	EXD3	95	41.932	Equus_caballus
ENSAMXG00000019494	exd3	69	44.988	ENSEEUG00000000405	-	86	42.161	Erinaceus_europaeus
ENSAMXG00000019494	exd3	99	58.119	ENSELUG00000007181	exd3	99	58.119	Esox_lucius
ENSAMXG00000019494	exd3	97	39.659	ENSFCAG00000003579	EXD3	96	39.432	Felis_catus
ENSAMXG00000019494	exd3	93	43.552	ENSFALG00000005132	EXD3	98	44.219	Ficedula_albicollis
ENSAMXG00000019494	exd3	99	49.249	ENSFHEG00000011352	exd3	98	48.747	Fundulus_heteroclitus
ENSAMXG00000019494	exd3	98	42.794	ENSGALG00000052646	EXD3	98	42.905	Gallus_gallus
ENSAMXG00000019494	exd3	99	52.013	ENSGAFG00000007328	exd3	99	51.848	Gambusia_affinis
ENSAMXG00000019494	exd3	84	54.011	ENSGACG00000017442	exd3	100	53.928	Gasterosteus_aculeatus
ENSAMXG00000019494	exd3	83	41.304	ENSGAGG00000011888	EXD3	92	41.838	Gopherus_agassizii
ENSAMXG00000019494	exd3	84	49.167	ENSGGOG00000024724	EXD3	95	49.785	Gorilla_gorilla
ENSAMXG00000019494	exd3	99	54.321	ENSHBUG00000001405	exd3	99	54.372	Haplochromis_burtoni
ENSAMXG00000019494	exd3	98	49.943	ENSHCOG00000020087	exd3	99	50.000	Hippocampus_comes
ENSAMXG00000019494	exd3	99	67.650	ENSIPUG00000020343	exd3	99	67.537	Ictalurus_punctatus
ENSAMXG00000019494	exd3	100	52.993	ENSKMAG00000011881	exd3	99	53.341	Kryptolebias_marmoratus
ENSAMXG00000019494	exd3	94	51.651	ENSLBEG00000004079	exd3	94	51.415	Labrus_bergylta
ENSAMXG00000019494	exd3	98	51.960	ENSLOCG00000002330	exd3	99	52.121	Lepisosteus_oculatus
ENSAMXG00000019494	exd3	84	40.777	ENSLAFG00000001122	EXD3	97	40.053	Loxodonta_africana
ENSAMXG00000019494	exd3	97	41.383	ENSMFAG00000037569	EXD3	96	40.795	Macaca_fascicularis
ENSAMXG00000019494	exd3	97	40.930	ENSMNEG00000033487	EXD3	96	40.341	Macaca_nemestrina
ENSAMXG00000019494	exd3	97	39.524	ENSMLEG00000040548	EXD3	96	38.933	Mandrillus_leucophaeus
ENSAMXG00000019494	exd3	87	52.767	ENSMAMG00000008407	exd3	94	52.828	Mastacembelus_armatus
ENSAMXG00000019494	exd3	99	54.321	ENSMZEG00005017270	exd3	99	54.372	Maylandia_zebra
ENSAMXG00000019494	exd3	84	43.675	ENSMGAG00000001267	EXD3	99	43.750	Meleagris_gallopavo
ENSAMXG00000019494	exd3	96	53.268	ENSMMOG00000021267	exd3	99	53.941	Mola_mola
ENSAMXG00000019494	exd3	59	44.973	ENSMODG00000028091	-	98	46.604	Monodelphis_domestica
ENSAMXG00000019494	exd3	99	51.743	ENSMALG00000018523	exd3	99	51.525	Monopterus_albus
ENSAMXG00000019494	exd3	96	39.977	ENSMPUG00000015130	EXD3	96	39.501	Mustela_putorius_furo
ENSAMXG00000019494	exd3	99	53.864	ENSNBRG00000019734	exd3	98	53.592	Neolamprologus_brichardi
ENSAMXG00000019494	exd3	84	41.965	ENSNLEG00000009095	-	94	41.434	Nomascus_leucogenys
ENSAMXG00000019494	exd3	84	55.168	ENSONIG00000003880	exd3	97	55.436	Oreochromis_niloticus
ENSAMXG00000019494	exd3	84	40.637	ENSOANG00000012485	-	98	40.106	Ornithorhynchus_anatinus
ENSAMXG00000019494	exd3	99	52.242	ENSORLG00000010377	exd3	98	53.175	Oryzias_latipes
ENSAMXG00000019494	exd3	99	52.242	ENSORLG00020012287	exd3	98	53.175	Oryzias_latipes_hni
ENSAMXG00000019494	exd3	99	52.130	ENSORLG00015001156	exd3	98	52.762	Oryzias_latipes_hsok
ENSAMXG00000019494	exd3	98	52.041	ENSOMEG00000023060	exd3	98	52.027	Oryzias_melastigma
ENSAMXG00000019494	exd3	97	40.904	ENSPPAG00000042435	EXD3	96	40.678	Pan_paniscus
ENSAMXG00000019494	exd3	97	39.548	ENSPPRG00000004634	EXD3	96	39.614	Panthera_pardus
ENSAMXG00000019494	exd3	97	40.182	ENSPANG00000026338	EXD3	96	39.955	Papio_anubis
ENSAMXG00000019494	exd3	99	54.668	ENSPKIG00000021103	exd3	99	54.556	Paramormyrops_kingsleyae
ENSAMXG00000019494	exd3	89	43.866	ENSPSIG00000007745	EXD3	92	43.362	Pelodiscus_sinensis
ENSAMXG00000019494	exd3	99	51.964	ENSPMGG00000023999	exd3	99	52.130	Periophthalmus_magnuspinnatus
ENSAMXG00000019494	exd3	67	38.972	ENSPMAG00000006135	-	100	38.308	Petromyzon_marinus
ENSAMXG00000019494	exd3	99	42.733	ENSPCIG00000006180	-	99	42.625	Phascolarctos_cinereus
ENSAMXG00000019494	exd3	99	51.106	ENSPFOG00000019685	exd3	100	51.438	Poecilia_formosa
ENSAMXG00000019494	exd3	88	55.045	ENSPLAG00000022290	exd3	96	55.230	Poecilia_latipinna
ENSAMXG00000019494	exd3	99	53.356	ENSPMEG00000008007	exd3	99	53.631	Poecilia_mexicana
ENSAMXG00000019494	exd3	99	53.579	ENSPREG00000008142	exd3	99	53.803	Poecilia_reticulata
ENSAMXG00000019494	exd3	99	54.209	ENSPNYG00000012849	exd3	99	54.260	Pundamilia_nyererei
ENSAMXG00000019494	exd3	99	77.361	ENSPNAG00000016753	exd3	99	77.247	Pygocentrus_nattereri
ENSAMXG00000019494	exd3	97	40.997	ENSRBIG00000031855	EXD3	96	40.883	Rhinopithecus_bieti
ENSAMXG00000019494	exd3	97	40.341	ENSRROG00000040120	EXD3	96	40.227	Rhinopithecus_roxellana
ENSAMXG00000019494	exd3	98	38.298	ENSSBOG00000022389	EXD3	91	38.410	Saimiri_boliviensis_boliviensis
ENSAMXG00000019494	exd3	84	41.982	ENSSHAG00000001276	-	98	42.173	Sarcophilus_harrisii
ENSAMXG00000019494	exd3	99	56.751	ENSSFOG00015023063	exd3	99	53.730	Scleropages_formosus
ENSAMXG00000019494	exd3	99	53.423	ENSSMAG00000019809	exd3	98	53.648	Scophthalmus_maximus
ENSAMXG00000019494	exd3	89	55.541	ENSSDUG00000006265	exd3	96	55.471	Seriola_dumerili
ENSAMXG00000019494	exd3	92	54.667	ENSSLDG00000004671	exd3	99	55.152	Seriola_lalandi_dorsalis
ENSAMXG00000019494	exd3	99	52.849	ENSSPAG00000017972	exd3	99	52.902	Stegastes_partitus
ENSAMXG00000019494	exd3	94	39.951	ENSSSCG00000005855	EXD3	98	39.755	Sus_scrofa
ENSAMXG00000019494	exd3	84	44.311	ENSTGUG00000002494	EXD3	99	44.311	Taeniopygia_guttata
ENSAMXG00000019494	exd3	99	50.438	ENSTRUG00000010236	exd3	95	50.330	Takifugu_rubripes
ENSAMXG00000019494	exd3	86	51.495	ENSTNIG00000013212	exd3	96	51.226	Tetraodon_nigroviridis
ENSAMXG00000019494	exd3	52	46.667	ENSTTRG00000003815	-	57	46.333	Tursiops_truncatus
ENSAMXG00000019494	exd3	92	39.851	ENSUAMG00000021470	EXD3	97	39.733	Ursus_americanus
ENSAMXG00000019494	exd3	95	41.247	ENSVVUG00000029403	EXD3	93	40.946	Vulpes_vulpes
ENSAMXG00000019494	exd3	88	54.789	ENSXMAG00000001467	exd3	96	54.917	Xiphophorus_maculatus