EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019511 (Gene tree)
Gene ID: 103021415
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 25280 bases
Position: chrAPWO02000029.1:4524192-4549471
Accession: 103021415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020087	DZF	PF07528.14	2.4e-70	1	1
ENSAMXP00000020087	zf-met	PF12874.7	1.7e-20	1	3
ENSAMXP00000020087	zf-met	PF12874.7	1.7e-20	2	3
ENSAMXP00000020087	zf-met	PF12874.7	1.7e-20	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020087	-	3570	XM_022664879	ENSAMXP00000020087	1053 (aa)	XP_022520600	W5LJS5

Gene Model

Click here to download ENSAMXG00000019511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019511	zfr	98	51.651	ENSAMXG00000021641	zfr2	50	62.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019511	zfr	100	79.439	ENSG00000056097	ZFR	98	77.788	Homo_sapiens
ENSAMXG00000019511	zfr	100	78.143	ENSAPOG00000009740	zfr	98	77.861	Acanthochromis_polyacanthus
ENSAMXG00000019511	zfr	100	79.326	ENSAMEG00000006184	ZFR	98	77.767	Ailuropoda_melanoleuca
ENSAMXG00000019511	zfr	94	86.826	ENSACIG00000015926	zfr	98	86.826	Amphilophus_citrinellus
ENSAMXG00000019511	zfr	100	81.162	ENSAOCG00000013876	zfr	98	81.443	Amphiprion_ocellaris
ENSAMXG00000019511	zfr	100	84.349	ENSAPEG00000024383	zfr	98	84.442	Amphiprion_percula
ENSAMXG00000019511	zfr	100	84.962	ENSATEG00000010271	zfr	98	82.613	Anabas_testudineus
ENSAMXG00000019511	zfr	80	75.414	ENSAPLG00000015627	-	100	74.941	Anas_platyrhynchos
ENSAMXG00000019511	zfr	100	77.674	ENSACAG00000007880	ZFR	98	76.360	Anolis_carolinensis
ENSAMXG00000019511	zfr	100	79.439	ENSANAG00000023333	ZFR	98	77.788	Aotus_nancymaae
ENSAMXG00000019511	zfr	94	86.826	ENSACLG00000016832	zfr	98	86.826	Astatotilapia_calliptera
ENSAMXG00000019511	zfr	100	79.720	ENSBTAG00000008414	ZFR	98	78.090	Bos_taurus
ENSAMXG00000019511	zfr	100	79.439	ENSCJAG00000018740	ZFR	98	80.347	Callithrix_jacchus
ENSAMXG00000019511	zfr	100	77.239	ENSCAFG00000018886	ZFR	98	78.086	Canis_familiaris
ENSAMXG00000019511	zfr	100	79.139	ENSCAFG00020016859	-	98	80.347	Canis_lupus_dingo
ENSAMXG00000019511	zfr	100	79.813	ENSCHIG00000007710	ZFR	98	78.184	Capra_hircus
ENSAMXG00000019511	zfr	99	79.600	ENSTSYG00000010670	ZFR	99	77.683	Carlito_syrichta
ENSAMXG00000019511	zfr	98	63.016	ENSCAPG00000015655	ZFR	100	59.615	Cavia_aperea
ENSAMXG00000019511	zfr	98	74.067	ENSCPOG00000000862	ZFR	100	71.716	Cavia_porcellus
ENSAMXG00000019511	zfr	100	79.533	ENSCCAG00000024473	ZFR	100	76.836	Cebus_capucinus
ENSAMXG00000019511	zfr	100	79.439	ENSCATG00000038311	ZFR	99	77.788	Cercocebus_atys
ENSAMXG00000019511	zfr	99	79.032	ENSCLAG00000007408	ZFR	100	77.661	Chinchilla_lanigera
ENSAMXG00000019511	zfr	100	79.533	ENSCSAG00000017180	ZFR	98	77.882	Chlorocebus_sabaeus
ENSAMXG00000019511	zfr	91	69.331	ENSCHOG00000003848	ZFR	94	64.543	Choloepus_hoffmanni
ENSAMXG00000019511	zfr	100	80.206	ENSCPBG00000024211	ZFR	98	78.987	Chrysemys_picta_bellii
ENSAMXG00000019511	zfr	100	79.533	ENSCANG00000017807	ZFR	100	77.286	Colobus_angolensis_palliatus
ENSAMXG00000019511	zfr	100	79.571	ENSCGRG00001016009	Zfr	98	77.072	Cricetulus_griseus_chok1gshd
ENSAMXG00000019511	zfr	99	79.190	ENSCGRG00000001228	Zfr	98	75.929	Cricetulus_griseus_crigri
ENSAMXG00000019511	zfr	93	86.145	ENSCSEG00000009224	zfr	98	84.337	Cynoglossus_semilaevis
ENSAMXG00000019511	zfr	99	82.342	ENSCSEG00000011169	ZFR	97	82.436	Cynoglossus_semilaevis
ENSAMXG00000019511	zfr	99	81.321	ENSCVAG00000016494	zfr	99	80.377	Cyprinodon_variegatus
ENSAMXG00000019511	zfr	100	89.057	ENSDARG00000027109	zfr	100	87.830	Danio_rerio
ENSAMXG00000019511	zfr	100	79.217	ENSDNOG00000008852	ZFR	98	77.643	Dasypus_novemcinctus
ENSAMXG00000019511	zfr	100	79.588	ENSDORG00000016643	Zfr	98	77.087	Dipodomys_ordii
ENSAMXG00000019511	zfr	100	74.953	ENSETEG00000008937	ZFR	98	73.352	Echinops_telfairi
ENSAMXG00000019511	zfr	54	59.028	ENSEBUG00000012503	-	99	56.620	Eptatretus_burgeri
ENSAMXG00000019511	zfr	100	79.139	ENSEASG00005007104	ZFR	98	77.674	Equus_asinus_asinus
ENSAMXG00000019511	zfr	81	77.574	ENSECAG00000012851	ZFR	97	76.234	Equus_caballus
ENSAMXG00000019511	zfr	94	69.980	ENSEEUG00000014206	ZFR	86	79.469	Erinaceus_europaeus
ENSAMXG00000019511	zfr	99	74.697	ENSELUG00000022743	zfr	96	75.000	Esox_lucius
ENSAMXG00000019511	zfr	100	79.233	ENSFCAG00000000354	ZFR	98	77.674	Felis_catus
ENSAMXG00000019511	zfr	100	79.206	ENSFALG00000002149	ZFR	98	78.261	Ficedula_albicollis
ENSAMXG00000019511	zfr	100	78.972	ENSFDAG00000012993	ZFR	99	77.434	Fukomys_damarensis
ENSAMXG00000019511	zfr	56	79.188	ENSFHEG00000012064	zfr	98	75.402	Fundulus_heteroclitus
ENSAMXG00000019511	zfr	100	71.523	ENSGMOG00000003967	zfr	91	90.000	Gadus_morhua
ENSAMXG00000019511	zfr	100	80.490	ENSGALG00000034488	-	98	78.794	Gallus_gallus
ENSAMXG00000019511	zfr	100	80.584	ENSGALG00000003235	-	98	79.076	Gallus_gallus
ENSAMXG00000019511	zfr	83	87.597	ENSGAFG00000016229	zfr	94	87.597	Gambusia_affinis
ENSAMXG00000019511	zfr	99	79.962	ENSGACG00000005045	zfr	100	79.245	Gasterosteus_aculeatus
ENSAMXG00000019511	zfr	94	79.643	ENSGAGG00000013544	ZFR	98	78.624	Gopherus_agassizii
ENSAMXG00000019511	zfr	100	79.626	ENSGGOG00000016302	ZFR	98	77.694	Gorilla_gorilla
ENSAMXG00000019511	zfr	100	79.533	ENSHGLG00000008088	ZFR	98	77.788	Heterocephalus_glaber_female
ENSAMXG00000019511	zfr	98	79.828	ENSHGLG00100016776	ZFR	99	77.948	Heterocephalus_glaber_male
ENSAMXG00000019511	zfr	100	82.083	ENSHCOG00000001548	zfr	98	81.051	Hippocampus_comes
ENSAMXG00000019511	zfr	100	92.635	ENSIPUG00000008192	zfr	98	92.823	Ictalurus_punctatus
ENSAMXG00000019511	zfr	100	79.379	ENSSTOG00000008742	ZFR	98	77.663	Ictidomys_tridecemlineatus
ENSAMXG00000019511	zfr	98	76.414	ENSJJAG00000023064	Zfr	97	74.593	Jaculus_jaculus
ENSAMXG00000019511	zfr	91	83.282	ENSKMAG00000009468	zfr	97	83.007	Kryptolebias_marmoratus
ENSAMXG00000019511	zfr	100	82.865	ENSLBEG00000010783	zfr	98	81.308	Labrus_bergylta
ENSAMXG00000019511	zfr	100	75.304	ENSLACG00000000831	ZFR	98	75.047	Latimeria_chalumnae
ENSAMXG00000019511	zfr	100	83.764	ENSLOCG00000006727	zfr	98	84.317	Lepisosteus_oculatus
ENSAMXG00000019511	zfr	100	78.745	ENSLAFG00000002308	ZFR	100	77.392	Loxodonta_africana
ENSAMXG00000019511	zfr	100	79.401	ENSMFAG00000042691	ZFR	99	77.788	Macaca_fascicularis
ENSAMXG00000019511	zfr	100	79.439	ENSMMUG00000001317	ZFR	98	77.788	Macaca_mulatta
ENSAMXG00000019511	zfr	100	79.439	ENSMNEG00000029441	ZFR	98	80.909	Macaca_nemestrina
ENSAMXG00000019511	zfr	99	79.695	ENSMLEG00000028503	ZFR	100	77.916	Mandrillus_leucophaeus
ENSAMXG00000019511	zfr	100	83.396	ENSMAMG00000017351	zfr	98	82.364	Mastacembelus_armatus
ENSAMXG00000019511	zfr	94	86.826	ENSMZEG00005021243	zfr	98	86.826	Maylandia_zebra
ENSAMXG00000019511	zfr	98	68.487	ENSMGAG00000002841	ZFR	71	69.907	Meleagris_gallopavo
ENSAMXG00000019511	zfr	100	79.664	ENSMAUG00000000976	Zfr	98	76.519	Mesocricetus_auratus
ENSAMXG00000019511	zfr	100	79.494	ENSMICG00000001244	ZFR	98	77.976	Microcebus_murinus
ENSAMXG00000019511	zfr	100	79.645	ENSMOCG00000018630	Zfr	98	78.110	Microtus_ochrogaster
ENSAMXG00000019511	zfr	100	78.028	ENSMMOG00000012585	zfr	90	79.791	Mola_mola
ENSAMXG00000019511	zfr	100	79.794	ENSMODG00000020412	ZFR	98	78.351	Monodelphis_domestica
ENSAMXG00000019511	zfr	100	79.151	ENSMALG00000007123	zfr	92	100.000	Monopterus_albus
ENSAMXG00000019511	zfr	100	79.384	MGP_CAROLIEiJ_G0019681	Zfr	100	78.859	Mus_caroli
ENSAMXG00000019511	zfr	100	79.478	ENSMUSG00000022201	Zfr	99	78.859	Mus_musculus
ENSAMXG00000019511	zfr	100	79.384	MGP_PahariEiJ_G0016057	Zfr	100	78.523	Mus_pahari
ENSAMXG00000019511	zfr	100	79.346	MGP_SPRETEiJ_G0020574	Zfr	100	78.859	Mus_spretus
ENSAMXG00000019511	zfr	73	77.337	ENSMPUG00000015193	-	94	77.219	Mustela_putorius_furo
ENSAMXG00000019511	zfr	99	79.867	ENSMLUG00000011797	ZFR	99	78.319	Myotis_lucifugus
ENSAMXG00000019511	zfr	100	79.439	ENSNGAG00000018328	Zfr	98	78.017	Nannospalax_galili
ENSAMXG00000019511	zfr	94	86.826	ENSNBRG00000008378	zfr	98	86.826	Neolamprologus_brichardi
ENSAMXG00000019511	zfr	99	79.600	ENSNLEG00000014098	ZFR	100	77.820	Nomascus_leucogenys
ENSAMXG00000019511	zfr	98	74.784	ENSMEUG00000010225	ZFR	100	73.007	Notamacropus_eugenii
ENSAMXG00000019511	zfr	83	84.000	ENSOPRG00000016756	ZFR	82	80.800	Ochotona_princeps
ENSAMXG00000019511	zfr	98	79.406	ENSODEG00000001990	ZFR	100	77.756	Octodon_degus
ENSAMXG00000019511	zfr	79	79.157	ENSONIG00000013960	zfr	76	83.254	Oreochromis_niloticus
ENSAMXG00000019511	zfr	98	81.089	ENSOANG00000014434	ZFR	99	79.139	Ornithorhynchus_anatinus
ENSAMXG00000019511	zfr	100	79.401	ENSOCUG00000016737	ZFR	98	77.694	Oryctolagus_cuniculus
ENSAMXG00000019511	zfr	99	81.998	ENSORLG00000017243	zfr	98	81.056	Oryzias_latipes
ENSAMXG00000019511	zfr	99	81.887	ENSORLG00020014823	zfr	98	80.943	Oryzias_latipes_hni
ENSAMXG00000019511	zfr	99	81.887	ENSORLG00015005801	zfr	98	80.943	Oryzias_latipes_hsok
ENSAMXG00000019511	zfr	99	82.645	ENSOMEG00000003336	zfr	98	81.784	Oryzias_melastigma
ENSAMXG00000019511	zfr	100	77.498	ENSOGAG00000015117	ZFR	98	75.843	Otolemur_garnettii
ENSAMXG00000019511	zfr	99	78.892	ENSOARG00000012233	ZFR	100	77.129	Ovis_aries
ENSAMXG00000019511	zfr	99	79.167	ENSPPAG00000027447	ZFR	99	77.703	Pan_paniscus
ENSAMXG00000019511	zfr	100	79.233	ENSPPRG00000008253	ZFR	98	77.674	Panthera_pardus
ENSAMXG00000019511	zfr	99	78.673	ENSPTIG00000010038	ZFR	97	77.281	Panthera_tigris_altaica
ENSAMXG00000019511	zfr	100	79.533	ENSPTRG00000016771	ZFR	98	77.788	Pan_troglodytes
ENSAMXG00000019511	zfr	99	79.226	ENSPANG00000003729	ZFR	98	77.505	Papio_anubis
ENSAMXG00000019511	zfr	100	75.671	ENSPKIG00000007596	ZFR	98	75.000	Paramormyrops_kingsleyae
ENSAMXG00000019511	zfr	100	84.972	ENSPKIG00000016781	ZFR	100	84.216	Paramormyrops_kingsleyae
ENSAMXG00000019511	zfr	53	83.453	ENSPSIG00000005779	ZFR	99	82.342	Pelodiscus_sinensis
ENSAMXG00000019511	zfr	100	65.530	ENSPMGG00000015984	zfr	98	65.814	Periophthalmus_magnuspinnatus
ENSAMXG00000019511	zfr	96	78.058	ENSPEMG00000014573	Zfr	96	76.054	Peromyscus_maniculatus_bairdii
ENSAMXG00000019511	zfr	100	79.888	ENSPCIG00000020906	ZFR	98	81.212	Phascolarctos_cinereus
ENSAMXG00000019511	zfr	99	82.814	ENSPFOG00000005931	zfr	98	81.964	Poecilia_formosa
ENSAMXG00000019511	zfr	99	82.814	ENSPREG00000011947	zfr	98	82.059	Poecilia_reticulata
ENSAMXG00000019511	zfr	99	79.314	ENSPPYG00000015378	ZFR	99	77.533	Pongo_abelii
ENSAMXG00000019511	zfr	100	72.523	ENSPCAG00000007277	ZFR	98	70.759	Procavia_capensis
ENSAMXG00000019511	zfr	95	79.015	ENSPCOG00000000045	ZFR	97	78.063	Propithecus_coquereli
ENSAMXG00000019511	zfr	94	84.337	ENSPVAG00000004780	ZFR	92	80.120	Pteropus_vampyrus
ENSAMXG00000019511	zfr	94	86.826	ENSPNYG00000006239	zfr	98	86.826	Pundamilia_nyererei
ENSAMXG00000019511	zfr	100	94.886	ENSPNAG00000025151	zfr	98	94.792	Pygocentrus_nattereri
ENSAMXG00000019511	zfr	100	79.291	ENSRNOG00000011627	Zfr	100	79.070	Rattus_norvegicus
ENSAMXG00000019511	zfr	100	79.439	ENSRBIG00000041561	ZFR	99	77.441	Rhinopithecus_bieti
ENSAMXG00000019511	zfr	100	79.439	ENSRROG00000044008	ZFR	100	77.788	Rhinopithecus_roxellana
ENSAMXG00000019511	zfr	98	79.693	ENSSBOG00000024150	ZFR	99	77.756	Saimiri_boliviensis_boliviensis
ENSAMXG00000019511	zfr	98	80.229	ENSSHAG00000015478	ZFR	98	81.571	Sarcophilus_harrisii
ENSAMXG00000019511	zfr	100	77.392	ENSSFOG00015017300	ZFR	98	77.767	Scleropages_formosus
ENSAMXG00000019511	zfr	98	86.747	ENSSMAG00000000320	zfr	98	85.542	Scophthalmus_maximus
ENSAMXG00000019511	zfr	100	85.728	ENSSDUG00000013882	zfr	98	86.747	Seriola_dumerili
ENSAMXG00000019511	zfr	94	87.952	ENSSLDG00000000762	zfr	98	86.747	Seriola_lalandi_dorsalis
ENSAMXG00000019511	zfr	92	85.650	ENSSARG00000006571	ZFR	91	82.063	Sorex_araneus
ENSAMXG00000019511	zfr	98	80.096	ENSSPUG00000016786	ZFR	100	79.023	Sphenodon_punctatus
ENSAMXG00000019511	zfr	100	84.615	ENSSPAG00000019293	zfr	98	83.396	Stegastes_partitus
ENSAMXG00000019511	zfr	100	79.626	ENSSSCG00000027681	ZFR	98	80.347	Sus_scrofa
ENSAMXG00000019511	zfr	100	80.187	ENSTGUG00000001909	ZFR	99	78.017	Taeniopygia_guttata
ENSAMXG00000019511	zfr	100	82.707	ENSTRUG00000016620	zfr	98	82.237	Takifugu_rubripes
ENSAMXG00000019511	zfr	56	78.752	ENSTNIG00000018856	zfr	98	77.909	Tetraodon_nigroviridis
ENSAMXG00000019511	zfr	93	73.883	ENSTBEG00000017687	ZFR	90	83.803	Tupaia_belangeri
ENSAMXG00000019511	zfr	98	77.608	ENSTTRG00000017321	ZFR	96	75.839	Tursiops_truncatus
ENSAMXG00000019511	zfr	80	77.608	ENSUAMG00000000172	-	99	76.325	Ursus_americanus
ENSAMXG00000019511	zfr	80	77.608	ENSUMAG00000013805	-	99	76.325	Ursus_maritimus
ENSAMXG00000019511	zfr	98	79.617	ENSVPAG00000011011	ZFR	96	77.756	Vicugna_pacos
ENSAMXG00000019511	zfr	100	79.233	ENSVVUG00000022171	-	99	77.674	Vulpes_vulpes
ENSAMXG00000019511	zfr	100	72.290	ENSXETG00000015598	zfr	98	71.819	Xenopus_tropicalis
ENSAMXG00000019511	zfr	99	82.325	ENSXCOG00000009361	zfr	98	81.474	Xiphophorus_couchianus
ENSAMXG00000019511	zfr	99	82.420	ENSXMAG00000013356	zfr	98	81.569	Xiphophorus_maculatus