EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019529 (Gene tree)
Gene ID: 103028390
Gene Symbol: efl1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 170753 bases
Position: chr5:4762048-4932800
Accession: 103028390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020153	GTP_EFTU	PF00009.27	5e-62	1	1
ENSAMXP00000033530	GTP_EFTU	PF00009.27	1.7e-61	1	1
ENSAMXP00000027419	GTP_EFTU	PF00009.27	2.4e-45	1	1
ENSAMXP00000031190	GTP_EFTU	PF00009.27	6e-45	1	1
ENSAMXP00000031190	GTP_EFTU_D2	PF03144.25	3.4e-09	1	1
ENSAMXP00000027419	GTP_EFTU_D2	PF03144.25	3.5e-09	1	1
ENSAMXP00000033530	GTP_EFTU_D2	PF03144.25	3.5e-09	1	1
ENSAMXP00000020153	GTP_EFTU_D2	PF03144.25	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053417	-	3829	-	ENSAMXP00000027419	1088 (aa)	-	-
ENSAMXT00000048663	-	3312	-	ENSAMXP00000033530	1103 (aa)	-	-
ENSAMXT00000038597	-	3598	-	ENSAMXP00000031190	1095 (aa)	-	-
ENSAMXT00000020153	-	3736	XM_022669519	ENSAMXP00000020153	1141 (aa)	XP_022525240	W5LJZ1

Gene Model

Click here to download ENSAMXG00000019529's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019529's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019529	efl1	85	35.294	ENSAMXG00000006645	eef2b	97	35.294
ENSAMXG00000019529	efl1	86	31.690	ENSAMXG00000000568	eftud2	83	31.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019529	efl1	100	69.406	ENSG00000140598	EFL1	99	76.389	Homo_sapiens
ENSAMXG00000019529	efl1	100	75.716	ENSAPOG00000000188	efl1	100	74.848	Acanthochromis_polyacanthus
ENSAMXG00000019529	efl1	100	68.815	ENSAMEG00000006031	EFL1	100	69.029	Ailuropoda_melanoleuca
ENSAMXG00000019529	efl1	100	75.530	ENSACIG00000017802	efl1	100	75.744	Amphilophus_citrinellus
ENSAMXG00000019529	efl1	100	74.672	ENSAOCG00000023933	efl1	100	74.672	Amphiprion_ocellaris
ENSAMXG00000019529	efl1	100	75.868	ENSAPEG00000000262	efl1	100	75.544	Amphiprion_percula
ENSAMXG00000019529	efl1	100	76.000	ENSATEG00000012373	efl1	100	75.784	Anabas_testudineus
ENSAMXG00000019529	efl1	100	72.694	ENSAPLG00000011147	EFL1	99	71.878	Anas_platyrhynchos
ENSAMXG00000019529	efl1	100	71.024	ENSACAG00000011040	EFL1	99	71.642	Anolis_carolinensis
ENSAMXG00000019529	efl1	100	69.050	ENSANAG00000027459	EFL1	100	69.398	Aotus_nancymaae
ENSAMXG00000019529	efl1	100	76.527	ENSACLG00000025780	efl1	100	76.265	Astatotilapia_calliptera
ENSAMXG00000019529	efl1	100	70.174	ENSBTAG00000003410	EFL1	100	69.878	Bos_taurus
ENSAMXG00000019529	efl1	94	37.825	WBGene00010732	K10C3.5	93	57.658	Caenorhabditis_elegans
ENSAMXG00000019529	efl1	86	92.857	ENSCJAG00000015607	-	93	92.857	Callithrix_jacchus
ENSAMXG00000019529	efl1	100	68.854	ENSCAFG00000013671	EFL1	99	68.947	Canis_familiaris
ENSAMXG00000019529	efl1	100	70.174	ENSCHIG00000001883	EFL1	100	69.965	Capra_hircus
ENSAMXG00000019529	efl1	100	69.017	ENSTSYG00000000348	EFL1	100	68.799	Carlito_syrichta
ENSAMXG00000019529	efl1	100	58.793	ENSCAPG00000017944	EFL1	100	58.615	Cavia_aperea
ENSAMXG00000019529	efl1	100	69.064	ENSCPOG00000001924	EFL1	99	69.110	Cavia_porcellus
ENSAMXG00000019529	efl1	100	69.116	ENSCCAG00000034450	EFL1	100	69.573	Cebus_capucinus
ENSAMXG00000019529	efl1	100	68.066	ENSCATG00000031678	-	100	68.297	Cercocebus_atys
ENSAMXG00000019529	efl1	100	68.095	ENSCLAG00000010155	EFL1	99	69.023	Chinchilla_lanigera
ENSAMXG00000019529	efl1	100	68.706	ENSCSAG00000015165	EFL1	99	68.947	Chlorocebus_sabaeus
ENSAMXG00000019529	efl1	76	67.269	ENSCHOG00000014029	EFL1	78	68.156	Choloepus_hoffmanni
ENSAMXG00000019529	efl1	99	73.241	ENSCPBG00000017638	EFL1	99	73.241	Chrysemys_picta_bellii
ENSAMXG00000019529	efl1	99	61.951	ENSCSAVG00000001787	-	99	62.443	Ciona_savignyi
ENSAMXG00000019529	efl1	100	68.881	ENSCANG00000038093	EFL1	100	69.029	Colobus_angolensis_palliatus
ENSAMXG00000019529	efl1	100	65.998	ENSCGRG00001010826	Efl1	99	65.799	Cricetulus_griseus_chok1gshd
ENSAMXG00000019529	efl1	100	68.352	ENSCGRG00000003273	Efl1	99	68.576	Cricetulus_griseus_crigri
ENSAMXG00000019529	efl1	100	71.233	ENSCSEG00000005856	efl1	99	71.478	Cynoglossus_semilaevis
ENSAMXG00000019529	efl1	98	71.001	ENSCVAG00000011863	efl1	95	70.907	Cyprinodon_variegatus
ENSAMXG00000019529	efl1	100	80.385	ENSDARG00000079672	efl1	98	79.842	Danio_rerio
ENSAMXG00000019529	efl1	100	69.130	ENSDNOG00000006097	EFL1	100	68.902	Dasypus_novemcinctus
ENSAMXG00000019529	efl1	100	68.325	ENSDORG00000000719	Efl1	100	68.761	Dipodomys_ordii
ENSAMXG00000019529	efl1	99	45.906	FBgn0053158	CG33158	99	46.339	Drosophila_melanogaster
ENSAMXG00000019529	efl1	97	61.408	ENSETEG00000004309	EFL1	99	61.798	Echinops_telfairi
ENSAMXG00000019529	efl1	83	70.439	ENSEBUG00000010738	efl1	100	70.439	Eptatretus_burgeri
ENSAMXG00000019529	efl1	100	69.196	ENSEASG00005007108	EFL1	99	70.000	Equus_asinus_asinus
ENSAMXG00000019529	efl1	100	69.196	ENSECAG00000016354	EFL1	99	69.478	Equus_caballus
ENSAMXG00000019529	efl1	73	73.729	ENSEEUG00000006326	EFL1	79	73.729	Erinaceus_europaeus
ENSAMXG00000019529	efl1	100	72.342	ENSELUG00000002520	efl1	98	80.887	Esox_lucius
ENSAMXG00000019529	efl1	100	70.079	ENSFCAG00000007741	EFL1	99	70.175	Felis_catus
ENSAMXG00000019529	efl1	100	72.767	ENSFALG00000011103	EFL1	99	72.474	Ficedula_albicollis
ENSAMXG00000019529	efl1	100	67.703	ENSFDAG00000009023	EFL1	100	68.696	Fukomys_damarensis
ENSAMXG00000019529	efl1	100	73.211	ENSFHEG00000017795	efl1	100	72.735	Fundulus_heteroclitus
ENSAMXG00000019529	efl1	100	70.696	ENSGMOG00000005041	efl1	100	71.341	Gadus_morhua
ENSAMXG00000019529	efl1	100	72.587	ENSGALG00000006225	EFL1	99	72.648	Gallus_gallus
ENSAMXG00000019529	efl1	100	73.491	ENSGACG00000012495	efl1	100	73.403	Gasterosteus_aculeatus
ENSAMXG00000019529	efl1	100	73.157	ENSGAGG00000022841	EFL1	99	73.368	Gopherus_agassizii
ENSAMXG00000019529	efl1	100	63.795	ENSGGOG00000005017	EFL1	100	65.748	Gorilla_gorilla
ENSAMXG00000019529	efl1	100	76.414	ENSHBUG00000022667	efl1	100	76.215	Haplochromis_burtoni
ENSAMXG00000019529	efl1	100	65.734	ENSHGLG00000011798	EFL1	100	66.434	Heterocephalus_glaber_female
ENSAMXG00000019529	efl1	100	68.269	ENSHGLG00100010319	EFTUD1	95	82.278	Heterocephalus_glaber_male
ENSAMXG00000019529	efl1	100	74.042	ENSHCOG00000007325	efl1	100	73.913	Hippocampus_comes
ENSAMXG00000019529	efl1	100	81.157	ENSIPUG00000023360	EFTUD1	100	80.719	Ictalurus_punctatus
ENSAMXG00000019529	efl1	100	65.764	ENSSTOG00000022945	EFL1	100	66.114	Ictidomys_tridecemlineatus
ENSAMXG00000019529	efl1	100	68.439	ENSJJAG00000018598	Efl1	100	68.941	Jaculus_jaculus
ENSAMXG00000019529	efl1	100	73.932	ENSLBEG00000015269	efl1	100	72.671	Labrus_bergylta
ENSAMXG00000019529	efl1	100	73.345	ENSLACG00000016121	EFL1	100	73.264	Latimeria_chalumnae
ENSAMXG00000019529	efl1	100	76.856	ENSLOCG00000012862	efl1	99	77.205	Lepisosteus_oculatus
ENSAMXG00000019529	efl1	100	67.989	ENSLAFG00000012504	EFL1	100	67.989	Loxodonta_africana
ENSAMXG00000019529	efl1	100	68.788	ENSMFAG00000032657	-	100	68.941	Macaca_fascicularis
ENSAMXG00000019529	efl1	100	66.808	ENSMMUG00000023353	EFL1	99	67.036	Macaca_mulatta
ENSAMXG00000019529	efl1	100	68.619	ENSMNEG00000041671	-	99	68.860	Macaca_nemestrina
ENSAMXG00000019529	efl1	100	68.329	ENSMLEG00000033735	EFL1	100	68.559	Mandrillus_leucophaeus
ENSAMXG00000019529	efl1	100	75.546	ENSMAMG00000011336	efl1	100	75.437	Mastacembelus_armatus
ENSAMXG00000019529	efl1	100	76.414	ENSMZEG00005003012	efl1	100	76.414	Maylandia_zebra
ENSAMXG00000019529	efl1	100	72.091	ENSMGAG00000007991	EFL1	99	71.837	Meleagris_gallopavo
ENSAMXG00000019529	efl1	100	68.788	ENSMAUG00000010709	Efl1	100	68.918	Mesocricetus_auratus
ENSAMXG00000019529	efl1	100	69.599	ENSMICG00000027853	EFL1	95	74.938	Microcebus_murinus
ENSAMXG00000019529	efl1	100	68.435	ENSMOCG00000007470	Efl1	99	68.875	Microtus_ochrogaster
ENSAMXG00000019529	efl1	98	72.305	ENSMMOG00000015370	efl1	98	72.160	Mola_mola
ENSAMXG00000019529	efl1	100	68.527	ENSMODG00000019386	EFL1	100	68.963	Monodelphis_domestica
ENSAMXG00000019529	efl1	100	74.697	ENSMALG00000018810	efl1	100	74.392	Monopterus_albus
ENSAMXG00000019529	efl1	100	68.430	MGP_CAROLIEiJ_G0029936	Efl1	98	78.049	Mus_caroli
ENSAMXG00000019529	efl1	100	68.517	ENSMUSG00000038563	Efl1	99	78.481	Mus_musculus
ENSAMXG00000019529	efl1	100	68.257	MGP_PahariEiJ_G0013157	Efl1	100	77.917	Mus_pahari
ENSAMXG00000019529	efl1	100	84.000	MGP_SPRETEiJ_G0031038	Efl1	100	84.000	Mus_spretus
ENSAMXG00000019529	efl1	100	67.851	ENSMPUG00000015494	EFL1	99	68.325	Mustela_putorius_furo
ENSAMXG00000019529	efl1	100	68.706	ENSNGAG00000017740	Efl1	100	68.969	Nannospalax_galili
ENSAMXG00000019529	efl1	97	68.302	ENSNLEG00000010679	EFL1	99	68.461	Nomascus_leucogenys
ENSAMXG00000019529	efl1	64	77.358	ENSMEUG00000012049	-	69	77.358	Notamacropus_eugenii
ENSAMXG00000019529	efl1	58	92.857	ENSOPRG00000012488	-	55	92.857	Ochotona_princeps
ENSAMXG00000019529	efl1	100	67.216	ENSODEG00000016193	EFL1	100	67.563	Octodon_degus
ENSAMXG00000019529	efl1	100	75.895	ENSONIG00000003394	efl1	100	76.199	Oreochromis_niloticus
ENSAMXG00000019529	efl1	100	69.512	ENSOCUG00000012163	EFL1	100	70.122	Oryctolagus_cuniculus
ENSAMXG00000019529	efl1	66	66.483	ENSORLG00000020390	efl1	100	66.621	Oryzias_latipes
ENSAMXG00000019529	efl1	100	77.311	ENSORLG00015012031	efl1	94	77.731	Oryzias_latipes_hsok
ENSAMXG00000019529	efl1	100	72.576	ENSOMEG00000022784	efl1	100	72.227	Oryzias_melastigma
ENSAMXG00000019529	efl1	100	70.113	ENSOARG00000014452	EFL1	100	69.905	Ovis_aries
ENSAMXG00000019529	efl1	100	64.479	ENSPPAG00000039672	EFL1	100	64.917	Pan_paniscus
ENSAMXG00000019529	efl1	100	70.604	ENSPPRG00000002193	EFL1	99	70.526	Panthera_pardus
ENSAMXG00000019529	efl1	100	70.419	ENSPTIG00000007053	EFL1	99	70.351	Panthera_tigris_altaica
ENSAMXG00000019529	efl1	100	69.204	ENSPTRG00000007374	EFL1	100	69.379	Pan_troglodytes
ENSAMXG00000019529	efl1	100	68.619	ENSPANG00000015635	-	98	68.860	Papio_anubis
ENSAMXG00000019529	efl1	100	73.670	ENSPKIG00000018456	efl1	99	74.253	Paramormyrops_kingsleyae
ENSAMXG00000019529	efl1	100	72.507	ENSPSIG00000007790	EFL1	100	72.348	Pelodiscus_sinensis
ENSAMXG00000019529	efl1	97	64.200	ENSPMAG00000002026	efl1	100	64.219	Petromyzon_marinus
ENSAMXG00000019529	efl1	100	69.747	ENSPCIG00000004372	EFL1	100	69.291	Phascolarctos_cinereus
ENSAMXG00000019529	efl1	100	72.522	ENSPFOG00000018687	efl1	100	72.276	Poecilia_formosa
ENSAMXG00000019529	efl1	100	72.578	ENSPLAG00000001988	efl1	100	72.363	Poecilia_latipinna
ENSAMXG00000019529	efl1	100	72.527	ENSPMEG00000000402	efl1	100	72.489	Poecilia_mexicana
ENSAMXG00000019529	efl1	100	72.744	ENSPREG00000022085	efl1	100	72.435	Poecilia_reticulata
ENSAMXG00000019529	efl1	100	69.398	ENSPPYG00000006724	EFL1	100	69.554	Pongo_abelii
ENSAMXG00000019529	efl1	100	69.956	ENSPVAG00000003189	EFL1	99	70.403	Pteropus_vampyrus
ENSAMXG00000019529	efl1	100	69.050	ENSPNYG00000019406	efl1	90	80.333	Pundamilia_nyererei
ENSAMXG00000019529	efl1	100	88.694	ENSPNAG00000012104	efl1	100	88.606	Pygocentrus_nattereri
ENSAMXG00000019529	efl1	100	69.311	ENSRNOG00000032723	Efl1	100	69.311	Rattus_norvegicus
ENSAMXG00000019529	efl1	100	68.706	ENSRBIG00000040576	EFL1	100	68.854	Rhinopithecus_bieti
ENSAMXG00000019529	efl1	100	67.045	ENSRROG00000031475	EFL1	100	67.192	Rhinopithecus_roxellana
ENSAMXG00000019529	efl1	94	51.204	YNL163C	RIA1	87	51.204	Saccharomyces_cerevisiae
ENSAMXG00000019529	efl1	100	68.854	ENSSBOG00000018280	EFL1	100	69.137	Saimiri_boliviensis_boliviensis
ENSAMXG00000019529	efl1	100	65.620	ENSSHAG00000018863	EFL1	100	65.881	Sarcophilus_harrisii
ENSAMXG00000019529	efl1	100	77.749	ENSSFOG00015016244	efl1	100	77.383	Scleropages_formosus
ENSAMXG00000019529	efl1	100	73.853	ENSSMAG00000016928	efl1	100	73.872	Scophthalmus_maximus
ENSAMXG00000019529	efl1	100	76.087	ENSSDUG00000013271	efl1	100	76.307	Seriola_dumerili
ENSAMXG00000019529	efl1	100	76.128	ENSSLDG00000014655	efl1	100	76.087	Seriola_lalandi_dorsalis
ENSAMXG00000019529	efl1	100	72.396	ENSSPUG00000000941	EFL1	100	72.396	Sphenodon_punctatus
ENSAMXG00000019529	efl1	100	76.327	ENSSPAG00000011885	efl1	100	76.128	Stegastes_partitus
ENSAMXG00000019529	efl1	100	69.565	ENSSSCG00000001792	EFL1	100	69.478	Sus_scrofa
ENSAMXG00000019529	efl1	100	72.537	ENSTGUG00000007850	EFL1	100	72.585	Taeniopygia_guttata
ENSAMXG00000019529	efl1	100	66.871	ENSTNIG00000003399	efl1	100	66.462	Tetraodon_nigroviridis
ENSAMXG00000019529	efl1	76	78.182	ENSTBEG00000011804	EFL1	78	78.182	Tupaia_belangeri
ENSAMXG00000019529	efl1	100	68.716	ENSTTRG00000011243	EFL1	100	68.253	Tursiops_truncatus
ENSAMXG00000019529	efl1	100	68.848	ENSUAMG00000022106	EFL1	99	69.211	Ursus_americanus
ENSAMXG00000019529	efl1	100	69.110	ENSUMAG00000010303	EFL1	99	69.474	Ursus_maritimus
ENSAMXG00000019529	efl1	94	80.000	ENSVPAG00000005735	EFL1	94	80.000	Vicugna_pacos
ENSAMXG00000019529	efl1	100	68.941	ENSVVUG00000004967	EFL1	99	69.035	Vulpes_vulpes
ENSAMXG00000019529	efl1	100	72.450	ENSXETG00000015701	EFL1	100	72.624	Xenopus_tropicalis
ENSAMXG00000019529	efl1	100	72.450	ENSXMAG00000023705	efl1	100	72.711	Xiphophorus_maculatus