EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019534 (Gene tree)
Gene ID: 103046008
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10851 bases
Position: chr10:30792534-30803384
Accession: 103046008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020116	PseudoU_synth_1	PF01416.20	1.2e-27	1	1
ENSAMXP00000020114	PseudoU_synth_1	PF01416.20	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020114	-	2089	-	ENSAMXP00000020114	532 (aa)	-	W5LJV2
ENSAMXT00000020116	-	2543	XM_007236346	ENSAMXP00000020116	477 (aa)	XP_007236408	W5LJV4

Gene Model

Click here to download ENSAMXG00000019534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019534's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019534	pus3	93	51.282	ENSG00000110060	PUS3	93	51.955	Homo_sapiens
ENSAMXG00000019534	pus3	95	68.330	ENSAPOG00000019483	pus3	98	68.282	Acanthochromis_polyacanthus
ENSAMXG00000019534	pus3	93	50.540	ENSAMEG00000000144	PUS3	89	51.116	Ailuropoda_melanoleuca
ENSAMXG00000019534	pus3	81	67.802	ENSACIG00000024479	pus3	100	69.863	Amphilophus_citrinellus
ENSAMXG00000019534	pus3	95	67.532	ENSAOCG00000006589	pus3	96	67.167	Amphiprion_ocellaris
ENSAMXG00000019534	pus3	95	67.174	ENSAPEG00000014617	pus3	96	67.826	Amphiprion_percula
ENSAMXG00000019534	pus3	97	66.094	ENSATEG00000022731	pus3	94	68.433	Anabas_testudineus
ENSAMXG00000019534	pus3	90	53.452	ENSAPLG00000013285	PUS3	99	53.452	Anas_platyrhynchos
ENSAMXG00000019534	pus3	90	51.121	ENSACAG00000000186	PUS3	94	50.673	Anolis_carolinensis
ENSAMXG00000019534	pus3	93	51.613	ENSANAG00000035614	PUS3	88	52.222	Aotus_nancymaae
ENSAMXG00000019534	pus3	98	64.768	ENSACLG00000007356	pus3	99	66.170	Astatotilapia_calliptera
ENSAMXG00000019534	pus3	93	50.851	ENSBTAG00000014339	PUS3	89	51.429	Bos_taurus
ENSAMXG00000019534	pus3	75	35.580	WBGene00006473	tag-124	94	34.987	Caenorhabditis_elegans
ENSAMXG00000019534	pus3	93	51.844	ENSCJAG00000046645	PUS3	88	52.466	Callithrix_jacchus
ENSAMXG00000019534	pus3	90	51.678	ENSCAFG00000010534	PUS3	88	51.570	Canis_familiaris
ENSAMXG00000019534	pus3	90	51.678	ENSCAFG00020010659	PUS3	88	51.570	Canis_lupus_dingo
ENSAMXG00000019534	pus3	93	51.392	ENSCHIG00000012260	PUS3	88	51.991	Capra_hircus
ENSAMXG00000019534	pus3	97	50.415	ENSTSYG00000014744	PUS3	88	52.822	Carlito_syrichta
ENSAMXG00000019534	pus3	93	50.435	ENSCAPG00000012231	PUS3	89	51.011	Cavia_aperea
ENSAMXG00000019534	pus3	93	50.435	ENSCPOG00000032587	PUS3	89	51.011	Cavia_porcellus
ENSAMXG00000019534	pus3	93	51.828	ENSCCAG00000035999	PUS3	88	52.444	Cebus_capucinus
ENSAMXG00000019534	pus3	93	52.061	ENSCATG00000043123	PUS3	88	52.691	Cercocebus_atys
ENSAMXG00000019534	pus3	93	51.940	ENSCLAG00000014947	PUS3	88	52.561	Chinchilla_lanigera
ENSAMXG00000019534	pus3	93	51.496	ENSCSAG00000002281	PUS3	88	52.691	Chlorocebus_sabaeus
ENSAMXG00000019534	pus3	80	52.865	ENSCHOG00000008442	PUS3	96	52.865	Choloepus_hoffmanni
ENSAMXG00000019534	pus3	66	36.571	ENSCING00000009062	-	67	36.571	Ciona_intestinalis
ENSAMXG00000019534	pus3	78	32.688	ENSCSAVG00000002211	-	90	32.688	Ciona_savignyi
ENSAMXG00000019534	pus3	93	52.061	ENSCANG00000038729	PUS3	88	52.466	Colobus_angolensis_palliatus
ENSAMXG00000019534	pus3	93	52.495	ENSCGRG00001019842	Pus3	89	53.139	Cricetulus_griseus_chok1gshd
ENSAMXG00000019534	pus3	93	52.061	ENSCGRG00000010155	Pus3	89	52.691	Cricetulus_griseus_crigri
ENSAMXG00000019534	pus3	96	64.301	ENSCSEG00000007948	pus3	95	65.577	Cynoglossus_semilaevis
ENSAMXG00000019534	pus3	94	68.062	ENSCVAG00000022150	pus3	95	68.062	Cyprinodon_variegatus
ENSAMXG00000019534	pus3	98	71.642	ENSDARG00000028976	pus3	97	71.642	Danio_rerio
ENSAMXG00000019534	pus3	93	49.784	ENSDNOG00000040719	PUS3	89	50.334	Dasypus_novemcinctus
ENSAMXG00000019534	pus3	93	51.193	ENSDORG00000001819	Pus3	88	52.018	Dipodomys_ordii
ENSAMXG00000019534	pus3	81	41.395	FBgn0034703	CG3045	84	41.395	Drosophila_melanogaster
ENSAMXG00000019534	pus3	90	46.861	ENSETEG00000013067	PUS3	88	46.966	Echinops_telfairi
ENSAMXG00000019534	pus3	79	51.389	ENSEBUG00000002154	pus3	62	51.142	Eptatretus_burgeri
ENSAMXG00000019534	pus3	93	50.540	ENSEASG00005023003	PUS3	89	51.116	Equus_asinus_asinus
ENSAMXG00000019534	pus3	93	49.787	ENSECAG00000007581	PUS3	89	50.330	Equus_caballus
ENSAMXG00000019534	pus3	92	50.000	ENSEEUG00000010543	PUS3	89	50.776	Erinaceus_europaeus
ENSAMXG00000019534	pus3	96	69.828	ENSELUG00000004425	pus3	97	69.130	Esox_lucius
ENSAMXG00000019534	pus3	94	51.078	ENSFCAG00000005340	PUS3	88	51.919	Felis_catus
ENSAMXG00000019534	pus3	91	52.212	ENSFALG00000005159	PUS3	91	52.116	Ficedula_albicollis
ENSAMXG00000019534	pus3	94	50.740	ENSFDAG00000020745	PUS3	88	51.549	Fukomys_damarensis
ENSAMXG00000019534	pus3	94	68.805	ENSFHEG00000010984	pus3	88	68.805	Fundulus_heteroclitus
ENSAMXG00000019534	pus3	94	64.835	ENSGMOG00000004534	pus3	99	64.835	Gadus_morhua
ENSAMXG00000019534	pus3	91	53.965	ENSGALG00000000962	PUS3	95	53.982	Gallus_gallus
ENSAMXG00000019534	pus3	96	68.251	ENSGAFG00000005615	pus3	97	68.251	Gambusia_affinis
ENSAMXG00000019534	pus3	95	65.721	ENSGACG00000002125	pus3	95	68.261	Gasterosteus_aculeatus
ENSAMXG00000019534	pus3	92	52.165	ENSGAGG00000000160	PUS3	87	52.915	Gopherus_agassizii
ENSAMXG00000019534	pus3	93	51.627	ENSGGOG00000015047	PUS3	88	52.242	Gorilla_gorilla
ENSAMXG00000019534	pus3	97	64.681	ENSHBUG00000016532	pus3	99	65.745	Haplochromis_burtoni
ENSAMXG00000019534	pus3	56	58.696	ENSHGLG00000015753	-	77	57.597	Heterocephalus_glaber_female
ENSAMXG00000019534	pus3	94	50.106	ENSHGLG00000000565	PUS3	88	50.885	Heterocephalus_glaber_female
ENSAMXG00000019534	pus3	92	47.007	ENSHGLG00000006599	-	84	47.489	Heterocephalus_glaber_female
ENSAMXG00000019534	pus3	91	46.085	ENSHGLG00000018861	-	89	46.528	Heterocephalus_glaber_female
ENSAMXG00000019534	pus3	67	53.251	ENSHGLG00100008656	-	96	53.251	Heterocephalus_glaber_male
ENSAMXG00000019534	pus3	92	47.619	ENSHGLG00100014825	-	88	48.222	Heterocephalus_glaber_male
ENSAMXG00000019534	pus3	75	48.919	ENSHGLG00100011339	-	82	49.577	Heterocephalus_glaber_male
ENSAMXG00000019534	pus3	50	56.612	ENSHGLG00100002435	-	86	56.612	Heterocephalus_glaber_male
ENSAMXG00000019534	pus3	66	52.147	ENSHGLG00100007519	-	68	52.147	Heterocephalus_glaber_male
ENSAMXG00000019534	pus3	94	67.699	ENSHCOG00000015705	pus3	96	67.699	Hippocampus_comes
ENSAMXG00000019534	pus3	100	72.917	ENSIPUG00000000105	pus3	99	73.542	Ictalurus_punctatus
ENSAMXG00000019534	pus3	90	52.466	ENSSTOG00000003721	PUS3	89	52.135	Ictidomys_tridecemlineatus
ENSAMXG00000019534	pus3	78	55.527	ENSJJAG00000011306	Pus3	89	51.461	Jaculus_jaculus
ENSAMXG00000019534	pus3	95	67.316	ENSKMAG00000016715	pus3	96	67.316	Kryptolebias_marmoratus
ENSAMXG00000019534	pus3	93	65.991	ENSLBEG00000004143	pus3	98	65.293	Labrus_bergylta
ENSAMXG00000019534	pus3	93	51.724	ENSLACG00000011161	PUS3	88	52.434	Latimeria_chalumnae
ENSAMXG00000019534	pus3	95	65.944	ENSLOCG00000011922	pus3	99	65.944	Lepisosteus_oculatus
ENSAMXG00000019534	pus3	93	50.870	ENSLAFG00000000535	PUS3	88	51.461	Loxodonta_africana
ENSAMXG00000019534	pus3	93	51.410	ENSMFAG00000041002	PUS3	89	52.018	Macaca_fascicularis
ENSAMXG00000019534	pus3	93	51.410	ENSMMUG00000041875	PUS3	89	52.018	Macaca_mulatta
ENSAMXG00000019534	pus3	93	51.410	ENSMNEG00000045347	PUS3	89	52.018	Macaca_nemestrina
ENSAMXG00000019534	pus3	93	52.061	ENSMLEG00000029053	PUS3	88	52.691	Mandrillus_leucophaeus
ENSAMXG00000019534	pus3	95	66.231	ENSMAMG00000016741	pus3	96	67.904	Mastacembelus_armatus
ENSAMXG00000019534	pus3	97	65.106	ENSMZEG00005015950	pus3	99	66.170	Maylandia_zebra
ENSAMXG00000019534	pus3	80	55.091	ENSMGAG00000000851	PUS3	95	54.569	Meleagris_gallopavo
ENSAMXG00000019534	pus3	93	52.278	ENSMAUG00000015873	Pus3	89	52.915	Mesocricetus_auratus
ENSAMXG00000019534	pus3	89	50.901	ENSMICG00000032941	PUS3	88	50.790	Microcebus_murinus
ENSAMXG00000019534	pus3	93	52.928	ENSMOCG00000004901	Pus3	89	53.587	Microtus_ochrogaster
ENSAMXG00000019534	pus3	98	66.247	ENSMMOG00000013909	pus3	99	66.247	Mola_mola
ENSAMXG00000019534	pus3	90	49.453	ENSMODG00000004222	PUS3	96	49.670	Monodelphis_domestica
ENSAMXG00000019534	pus3	95	66.234	ENSMALG00000022420	pus3	95	67.316	Monopterus_albus
ENSAMXG00000019534	pus3	93	50.652	MGP_CAROLIEiJ_G0031957	Pus3	97	56.173	Mus_caroli
ENSAMXG00000019534	pus3	90	51.454	ENSMUSG00000032103	Pus3	97	56.481	Mus_musculus
ENSAMXG00000019534	pus3	81	54.094	MGP_PahariEiJ_G0014822	Pus3	97	56.790	Mus_pahari
ENSAMXG00000019534	pus3	90	51.454	MGP_SPRETEiJ_G0033081	Pus3	97	56.481	Mus_spretus
ENSAMXG00000019534	pus3	93	51.522	ENSMPUG00000006568	PUS3	88	52.135	Mustela_putorius_furo
ENSAMXG00000019534	pus3	93	50.321	ENSMLUG00000030636	PUS3	88	51.106	Myotis_lucifugus
ENSAMXG00000019534	pus3	90	51.794	ENSNGAG00000013868	Pus3	89	51.685	Nannospalax_galili
ENSAMXG00000019534	pus3	97	64.606	ENSNBRG00000015864	pus3	99	65.672	Neolamprologus_brichardi
ENSAMXG00000019534	pus3	93	51.844	ENSNLEG00000007460	PUS3	88	52.242	Nomascus_leucogenys
ENSAMXG00000019534	pus3	75	62.162	ENSMEUG00000014040	PUS3	71	65.714	Notamacropus_eugenii
ENSAMXG00000019534	pus3	93	50.431	ENSOPRG00000007888	-	88	50.897	Ochotona_princeps
ENSAMXG00000019534	pus3	93	51.828	ENSODEG00000004280	PUS3	88	52.444	Octodon_degus
ENSAMXG00000019534	pus3	96	65.739	ENSONIG00000016224	pus3	99	66.809	Oreochromis_niloticus
ENSAMXG00000019534	pus3	94	52.146	ENSOANG00000000406	PUS3	88	55.392	Ornithorhynchus_anatinus
ENSAMXG00000019534	pus3	97	49.689	ENSOCUG00000004468	PUS3	83	51.685	Oryctolagus_cuniculus
ENSAMXG00000019534	pus3	97	66.879	ENSORLG00000008445	pus3	99	66.879	Oryzias_latipes
ENSAMXG00000019534	pus3	97	66.738	ENSORLG00020008847	pus3	99	66.738	Oryzias_latipes_hni
ENSAMXG00000019534	pus3	97	66.738	ENSORLG00015007438	pus3	99	66.738	Oryzias_latipes_hsok
ENSAMXG00000019534	pus3	97	67.452	ENSOMEG00000014321	pus3	98	67.591	Oryzias_melastigma
ENSAMXG00000019534	pus3	90	50.673	ENSOGAG00000008913	PUS3	88	50.897	Otolemur_garnettii
ENSAMXG00000019534	pus3	93	50.638	ENSOARG00000011870	PUS3	90	51.092	Ovis_aries
ENSAMXG00000019534	pus3	93	51.068	ENSPPAG00000025809	PUS3	88	52.349	Pan_paniscus
ENSAMXG00000019534	pus3	94	50.862	ENSPPRG00000005662	PUS3	88	51.693	Panthera_pardus
ENSAMXG00000019534	pus3	94	51.078	ENSPTIG00000001192	PUS3	88	51.919	Panthera_tigris_altaica
ENSAMXG00000019534	pus3	93	51.282	ENSPTRG00000004449	PUS3	88	52.573	Pan_troglodytes
ENSAMXG00000019534	pus3	93	52.061	ENSPANG00000013782	PUS3	88	52.691	Papio_anubis
ENSAMXG00000019534	pus3	96	68.113	ENSPKIG00000000646	pus3	98	68.113	Paramormyrops_kingsleyae
ENSAMXG00000019534	pus3	92	51.082	ENSPSIG00000013961	PUS3	87	51.794	Pelodiscus_sinensis
ENSAMXG00000019534	pus3	85	71.602	ENSPMGG00000000911	pus3	94	71.602	Periophthalmus_magnuspinnatus
ENSAMXG00000019534	pus3	93	51.193	ENSPEMG00000009602	Pus3	89	52.018	Peromyscus_maniculatus_bairdii
ENSAMXG00000019534	pus3	91	51.549	ENSPCIG00000010225	PUS3	95	51.902	Phascolarctos_cinereus
ENSAMXG00000019534	pus3	94	68.653	ENSPFOG00000009447	pus3	99	68.653	Poecilia_formosa
ENSAMXG00000019534	pus3	96	68.251	ENSPLAG00000023343	pus3	97	68.251	Poecilia_latipinna
ENSAMXG00000019534	pus3	96	68.467	ENSPMEG00000009870	pus3	95	68.928	Poecilia_mexicana
ENSAMXG00000019534	pus3	69	70.149	ENSPREG00000003179	pus3	64	70.149	Poecilia_reticulata
ENSAMXG00000019534	pus3	93	51.844	ENSPPYG00000004039	PUS3	88	52.466	Pongo_abelii
ENSAMXG00000019534	pus3	92	50.219	ENSPCAG00000000441	PUS3	88	50.562	Procavia_capensis
ENSAMXG00000019534	pus3	89	52.703	ENSPCOG00000019330	PUS3	88	52.596	Propithecus_coquereli
ENSAMXG00000019534	pus3	93	51.078	ENSPVAG00000002606	PUS3	89	51.670	Pteropus_vampyrus
ENSAMXG00000019534	pus3	97	65.319	ENSPNYG00000019615	pus3	99	66.383	Pundamilia_nyererei
ENSAMXG00000019534	pus3	100	81.551	ENSPNAG00000014541	pus3	99	81.551	Pygocentrus_nattereri
ENSAMXG00000019534	pus3	90	52.242	ENSRNOG00000012994	Pus3	89	52.135	Rattus_norvegicus
ENSAMXG00000019534	pus3	91	51.299	ENSRBIG00000044456	PUS3	87	52.500	Rhinopithecus_bieti
ENSAMXG00000019534	pus3	93	51.068	ENSRROG00000035245	PUS3	88	52.242	Rhinopithecus_roxellana
ENSAMXG00000019534	pus3	71	39.323	YFL001W	DEG1	65	44.300	Saccharomyces_cerevisiae
ENSAMXG00000019534	pus3	93	51.613	ENSSBOG00000022433	PUS3	88	52.222	Saimiri_boliviensis_boliviensis
ENSAMXG00000019534	pus3	93	50.107	ENSSHAG00000001382	PUS3	89	51.454	Sarcophilus_harrisii
ENSAMXG00000019534	pus3	94	67.188	ENSSFOG00015004850	pus3	96	67.333	Scleropages_formosus
ENSAMXG00000019534	pus3	95	67.312	ENSSMAG00000020340	pus3	96	68.172	Scophthalmus_maximus
ENSAMXG00000019534	pus3	95	66.377	ENSSDUG00000020825	pus3	95	69.130	Seriola_dumerili
ENSAMXG00000019534	pus3	95	68.261	ENSSLDG00000019932	pus3	95	69.348	Seriola_lalandi_dorsalis
ENSAMXG00000019534	pus3	67	52.632	ENSSARG00000013826	PUS3	96	52.632	Sorex_araneus
ENSAMXG00000019534	pus3	95	50.740	ENSSPUG00000001412	PUS3	88	52.477	Sphenodon_punctatus
ENSAMXG00000019534	pus3	95	68.053	ENSSPAG00000019221	pus3	97	68.053	Stegastes_partitus
ENSAMXG00000019534	pus3	93	50.538	ENSSSCG00000015222	PUS3	89	51.111	Sus_scrofa
ENSAMXG00000019534	pus3	91	51.670	ENSTGUG00000000778	-	98	51.562	Taeniopygia_guttata
ENSAMXG00000019534	pus3	94	65.556	ENSTRUG00000013050	pus3	99	65.556	Takifugu_rubripes
ENSAMXG00000019534	pus3	99	63.333	ENSTNIG00000004929	PUS3	99	63.333	Tetraodon_nigroviridis
ENSAMXG00000019534	pus3	84	63.415	ENSTNIG00000010307	pus3	97	63.415	Tetraodon_nigroviridis
ENSAMXG00000019534	pus3	90	53.139	ENSTBEG00000004382	PUS3	93	53.034	Tupaia_belangeri
ENSAMXG00000019534	pus3	93	49.787	ENSTTRG00000012167	PUS3	89	50.330	Tursiops_truncatus
ENSAMXG00000019534	pus3	93	50.324	ENSUAMG00000009297	PUS3	89	50.893	Ursus_americanus
ENSAMXG00000019534	pus3	93	50.540	ENSUMAG00000001795	PUS3	89	51.116	Ursus_maritimus
ENSAMXG00000019534	pus3	93	50.531	ENSVPAG00000001495	PUS3	89	51.096	Vicugna_pacos
ENSAMXG00000019534	pus3	90	51.678	ENSVVUG00000020152	PUS3	88	51.570	Vulpes_vulpes
ENSAMXG00000019534	pus3	58	30.097	ENSVVUG00000004199	PUS1	61	30.097	Vulpes_vulpes
ENSAMXG00000019534	pus3	87	50.346	ENSXETG00000024532	pus3	81	50.346	Xenopus_tropicalis
ENSAMXG00000019534	pus3	94	68.889	ENSXMAG00000028016	pus3	96	68.874	Xiphophorus_maculatus
ENSAMXG00000019534	pus3	53	76.562	ENSXMAG00000025146	pus3	79	76.562	Xiphophorus_maculatus
ENSAMXG00000019534	pus3	67	72.531	ENSXMAG00000029934	pus3	75	72.531	Xiphophorus_maculatus
ENSAMXG00000019534	pus3	67	72.755	ENSXMAG00000025077	pus3	75	72.755	Xiphophorus_maculatus
ENSAMXG00000019534	pus3	53	76.562	ENSXMAG00000028945	pus3	85	76.562	Xiphophorus_maculatus
ENSAMXG00000019534	pus3	67	72.755	ENSXMAG00000025659	PUS3	52	75.325	Xiphophorus_maculatus