EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019756 (Gene tree)
Gene ID: 103032585
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC103032585
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 20340 bases
Position: chrAPWO02000080.1:530223-550562
Accession: 103032585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020346	Exo_endo_phos	PF03372.23	6.1e-08	1	1
ENSAMXP00000030537	Exo_endo_phos	PF03372.23	6.1e-08	1	1
ENSAMXP00000045416	Exo_endo_phos	PF03372.23	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043603	-	4504	XM_022666813	ENSAMXP00000030537	921 (aa)	XP_022522534	UPI000BBD653D
ENSAMXT00000041072	-	4480	-	ENSAMXP00000045416	921 (aa)	-	UPI000BBD653D
ENSAMXT00000020346	-	2994	XM_007230513	ENSAMXP00000020346	921 (aa)	XP_007230575	W5LKI4

Gene Model

Click here to download ENSAMXG00000019756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019756	-	54	30.948	ENSAMXG00000032864	-	89	30.948

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019756	-	53	33.086	ENSDARG00000086613	si:dkey-266f7.10	93	33.086	Danio_rerio
ENSAMXG00000019756	-	52	31.287	ENSIPUG00000019271	-	86	31.287	Ictalurus_punctatus
ENSAMXG00000019756	-	51	30.208	ENSIPUG00000003756	-	88	30.417	Ictalurus_punctatus