EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000019757 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-7l6.3
Alias: -
Full Name: replication initiator 1-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2291 bases
Position: chr17:25031570-25033860
Accession: 103029657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020348	zf-C2H2	PF00096.26	1.2e-15	1	3
ENSAMXP00000020348	zf-C2H2	PF00096.26	1.2e-15	2	3
ENSAMXP00000020348	zf-C2H2	PF00096.26	1.2e-15	3	3
ENSAMXP00000020348	zf-met	PF12874.7	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020348	-	1142	XM_007237639	ENSAMXP00000020348	380 (aa)	XP_007237701	W5LKI6

Gene Model

Click here to download ENSAMXG00000019757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000019757	si:dkey-7l6.3	51	52.941	ENSAMXG00000037760	-	94	56.140
ENSAMXG00000019757	si:dkey-7l6.3	57	51.765	ENSAMXG00000037143	-	94	55.000
ENSAMXG00000019757	si:dkey-7l6.3	58	52.055	ENSAMXG00000035809	-	99	52.941
ENSAMXG00000019757	si:dkey-7l6.3	57	53.750	ENSAMXG00000009563	-	91	53.750
ENSAMXG00000019757	si:dkey-7l6.3	57	49.351	ENSAMXG00000026142	-	89	50.000
ENSAMXG00000019757	si:dkey-7l6.3	59	52.239	ENSAMXG00000026143	-	93	52.239
ENSAMXG00000019757	si:dkey-7l6.3	62	51.389	ENSAMXG00000035875	-	95	50.000
ENSAMXG00000019757	si:dkey-7l6.3	57	58.333	ENSAMXG00000040630	-	97	58.333
ENSAMXG00000019757	si:dkey-7l6.3	98	45.588	ENSAMXG00000038122	-	94	45.714
ENSAMXG00000019757	si:dkey-7l6.3	51	47.619	ENSAMXG00000013492	-	89	48.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019757	si:dkey-7l6.3	100	56.325	ENSDARG00000094514	si:dkey-7l6.3	95	54.869	Danio_rerio
ENSAMXG00000019757	si:dkey-7l6.3	100	70.866	ENSIPUG00000014394	si:dkey-7l6.3	100	70.496	Ictalurus_punctatus
ENSAMXG00000019757	si:dkey-7l6.3	100	77.494	ENSPNAG00000003616	si:dkey-7l6.3	99	76.154	Pygocentrus_nattereri