EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019771 (Gene tree)
Gene ID: 103030518
Gene Symbol: gtpbp4
Alias: GTP binding protein NGB|fi28d07|wu:fi28d07|zgc:55757
Full Name: GTP binding protein 4
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14940 bases
Position: chr17:25015849-25030788
Accession: 103030518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020369	NOG1	PF06858.14	2.7e-27	1	1
ENSAMXP00000033651	NOG1	PF06858.14	3.1e-27	1	1
ENSAMXP00000020369	MMR_HSR1	PF01926.23	1.1e-18	1	1
ENSAMXP00000033651	MMR_HSR1	PF01926.23	1.2e-18	1	1
ENSAMXP00000020369	NOGCT	PF08155.11	2.6e-21	1	1
ENSAMXP00000033651	NOGCT	PF08155.11	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000038600	-	5145	XM_007237641	ENSAMXP00000033651	633 (aa)	XP_007237703	UPI000BBDDB2D
ENSAMXT00000020369	-	1812	-	ENSAMXP00000020369	603 (aa)	-	W5LKK7

Gene Model

Click here to download ENSAMXG00000019771's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019771	gtpbp4	100	82.808	ENSG00000107937	GTPBP4	100	96.429	Homo_sapiens
ENSAMXG00000019771	gtpbp4	100	88.486	ENSAPOG00000020433	gtpbp4	100	84.409	Acanthochromis_polyacanthus
ENSAMXG00000019771	gtpbp4	100	80.915	ENSAMEG00000001845	GTPBP4	100	80.915	Ailuropoda_melanoleuca
ENSAMXG00000019771	gtpbp4	100	88.576	ENSACIG00000018629	gtpbp4	100	88.576	Amphilophus_citrinellus
ENSAMXG00000019771	gtpbp4	100	88.644	ENSAOCG00000000427	gtpbp4	93	88.644	Amphiprion_ocellaris
ENSAMXG00000019771	gtpbp4	100	88.801	ENSAPEG00000002544	gtpbp4	100	88.801	Amphiprion_percula
ENSAMXG00000019771	gtpbp4	100	89.432	ENSATEG00000012635	gtpbp4	95	89.432	Anabas_testudineus
ENSAMXG00000019771	gtpbp4	52	74.545	ENSAPLG00000013790	-	100	74.545	Anas_platyrhynchos
ENSAMXG00000019771	gtpbp4	100	84.700	ENSACAG00000002943	GTPBP4	100	84.700	Anolis_carolinensis
ENSAMXG00000019771	gtpbp4	98	72.337	ENSANAG00000022188	-	99	72.496	Aotus_nancymaae
ENSAMXG00000019771	gtpbp4	88	79.710	ENSANAG00000029209	-	100	79.710	Aotus_nancymaae
ENSAMXG00000019771	gtpbp4	71	92.634	ENSACLG00000026330	gtpbp4	92	94.667	Astatotilapia_calliptera
ENSAMXG00000019771	gtpbp4	100	82.808	ENSBTAG00000014917	GTPBP4	100	82.808	Bos_taurus
ENSAMXG00000019771	gtpbp4	99	54.519	WBGene00020297	nog-1	99	54.519	Caenorhabditis_elegans
ENSAMXG00000019771	gtpbp4	100	81.604	ENSCJAG00000022962	-	100	81.761	Callithrix_jacchus
ENSAMXG00000019771	gtpbp4	100	82.704	ENSCJAG00000008494	-	100	82.862	Callithrix_jacchus
ENSAMXG00000019771	gtpbp4	93	80.920	ENSCAFG00000005536	GTPBP4	100	80.920	Canis_familiaris
ENSAMXG00000019771	gtpbp4	100	81.546	ENSCAFG00020004307	GTPBP4	100	81.546	Canis_lupus_dingo
ENSAMXG00000019771	gtpbp4	100	82.492	ENSCHIG00000018346	GTPBP4	100	82.492	Capra_hircus
ENSAMXG00000019771	gtpbp4	100	82.285	ENSTSYG00000004977	GTPBP4	100	82.285	Carlito_syrichta
ENSAMXG00000019771	gtpbp4	98	73.440	ENSCAPG00000002134	GTPBP4	97	73.440	Cavia_aperea
ENSAMXG00000019771	gtpbp4	100	81.861	ENSCPOG00000013736	GTPBP4	100	81.861	Cavia_porcellus
ENSAMXG00000019771	gtpbp4	99	83.195	ENSCCAG00000021627	-	92	83.527	Cebus_capucinus
ENSAMXG00000019771	gtpbp4	100	62.085	ENSCCAG00000030115	-	100	61.453	Cebus_capucinus
ENSAMXG00000019771	gtpbp4	100	83.278	ENSCATG00000004303	GTPBP4	100	83.278	Cercocebus_atys
ENSAMXG00000019771	gtpbp4	100	82.019	ENSCLAG00000011323	GTPBP4	100	82.019	Chinchilla_lanigera
ENSAMXG00000019771	gtpbp4	100	83.123	ENSCSAG00000014097	GTPBP4	100	83.123	Chlorocebus_sabaeus
ENSAMXG00000019771	gtpbp4	96	88.679	ENSCHOG00000012602	GTPBP4	88	88.679	Choloepus_hoffmanni
ENSAMXG00000019771	gtpbp4	100	83.912	ENSCPBG00000008398	GTPBP4	100	83.912	Chrysemys_picta_bellii
ENSAMXG00000019771	gtpbp4	100	62.813	ENSCING00000001957	-	100	63.438	Ciona_intestinalis
ENSAMXG00000019771	gtpbp4	100	64.165	ENSCSAVG00000009793	-	99	79.612	Ciona_savignyi
ENSAMXG00000019771	gtpbp4	100	79.592	ENSCANG00000014168	GTPBP4	100	79.592	Colobus_angolensis_palliatus
ENSAMXG00000019771	gtpbp4	100	83.281	ENSCGRG00001013765	Gtpbp4	100	83.281	Cricetulus_griseus_chok1gshd
ENSAMXG00000019771	gtpbp4	100	83.281	ENSCGRG00000012171	Gtpbp4	100	83.281	Cricetulus_griseus_crigri
ENSAMXG00000019771	gtpbp4	100	87.748	ENSCSEG00000007352	gtpbp4	100	87.748	Cynoglossus_semilaevis
ENSAMXG00000019771	gtpbp4	100	86.755	ENSCVAG00000008993	gtpbp4	100	86.755	Cyprinodon_variegatus
ENSAMXG00000019771	gtpbp4	100	90.521	ENSDARG00000018961	gtpbp4	100	90.521	Danio_rerio
ENSAMXG00000019771	gtpbp4	67	75.059	ENSDNOG00000006746	GTPBP4	100	75.059	Dasypus_novemcinctus
ENSAMXG00000019771	gtpbp4	82	94.286	ENSDORG00000010884	Gtpbp4	96	94.286	Dipodomys_ordii
ENSAMXG00000019771	gtpbp4	100	59.271	FBgn0028473	Non1	100	58.869	Drosophila_melanogaster
ENSAMXG00000019771	gtpbp4	74	80.593	ENSETEG00000016840	-	71	80.593	Echinops_telfairi
ENSAMXG00000019771	gtpbp4	98	67.227	ENSEBUG00000010311	gtpbp4	99	64.452	Eptatretus_burgeri
ENSAMXG00000019771	gtpbp4	100	81.546	ENSEASG00005019082	GTPBP4	100	81.546	Equus_asinus_asinus
ENSAMXG00000019771	gtpbp4	100	81.954	ENSECAG00000001700	GTPBP4	93	92.857	Equus_caballus
ENSAMXG00000019771	gtpbp4	100	87.332	ENSEEUG00000009889	GTPBP4	91	87.332	Erinaceus_europaeus
ENSAMXG00000019771	gtpbp4	100	85.692	ENSELUG00000008578	gtpbp4	100	84.992	Esox_lucius
ENSAMXG00000019771	gtpbp4	100	82.019	ENSFCAG00000026213	GTPBP4	100	82.019	Felis_catus
ENSAMXG00000019771	gtpbp4	99	83.994	ENSFALG00000006971	GTPBP4	87	84.202	Ficedula_albicollis
ENSAMXG00000019771	gtpbp4	100	82.019	ENSFDAG00000000998	GTPBP4	100	82.019	Fukomys_damarensis
ENSAMXG00000019771	gtpbp4	100	87.417	ENSFHEG00000012922	gtpbp4	100	87.417	Fundulus_heteroclitus
ENSAMXG00000019771	gtpbp4	100	85.647	ENSGMOG00000016090	gtpbp4	100	85.647	Gadus_morhua
ENSAMXG00000019771	gtpbp4	100	83.412	ENSGALG00000006703	GTPBP4	100	83.412	Gallus_gallus
ENSAMXG00000019771	gtpbp4	100	87.583	ENSGAFG00000002075	gtpbp4	100	87.583	Gambusia_affinis
ENSAMXG00000019771	gtpbp4	100	86.909	ENSGACG00000017481	gtpbp4	100	86.909	Gasterosteus_aculeatus
ENSAMXG00000019771	gtpbp4	93	83.986	ENSGAGG00000018689	GTPBP4	100	83.986	Gopherus_agassizii
ENSAMXG00000019771	gtpbp4	100	83.113	ENSGGOG00000013372	GTPBP4	100	83.113	Gorilla_gorilla
ENSAMXG00000019771	gtpbp4	100	90.066	ENSHBUG00000000192	gtpbp4	100	90.066	Haplochromis_burtoni
ENSAMXG00000019771	gtpbp4	100	81.861	ENSHGLG00000013071	GTPBP4	100	81.861	Heterocephalus_glaber_female
ENSAMXG00000019771	gtpbp4	100	75.276	ENSHGLG00100002964	-	100	75.276	Heterocephalus_glaber_male
ENSAMXG00000019771	gtpbp4	100	81.861	ENSHGLG00100017850	GTPBP4	100	81.861	Heterocephalus_glaber_male
ENSAMXG00000019771	gtpbp4	100	88.926	ENSHCOG00000011543	gtpbp4	100	88.926	Hippocampus_comes
ENSAMXG00000019771	gtpbp4	100	91.887	ENSIPUG00000014417	GTPBP4	100	91.887	Ictalurus_punctatus
ENSAMXG00000019771	gtpbp4	100	82.650	ENSSTOG00000010042	-	100	82.650	Ictidomys_tridecemlineatus
ENSAMXG00000019771	gtpbp4	100	74.448	ENSSTOG00000023023	-	100	74.448	Ictidomys_tridecemlineatus
ENSAMXG00000019771	gtpbp4	100	81.703	ENSJJAG00000010021	Gtpbp4	100	81.703	Jaculus_jaculus
ENSAMXG00000019771	gtpbp4	100	87.066	ENSKMAG00000021705	gtpbp4	100	87.066	Kryptolebias_marmoratus
ENSAMXG00000019771	gtpbp4	100	86.612	ENSLBEG00000021419	gtpbp4	100	86.612	Labrus_bergylta
ENSAMXG00000019771	gtpbp4	100	85.489	ENSLACG00000001449	GTPBP4	100	85.489	Latimeria_chalumnae
ENSAMXG00000019771	gtpbp4	100	88.000	ENSLOCG00000012279	gtpbp4	100	88.000	Lepisosteus_oculatus
ENSAMXG00000019771	gtpbp4	100	82.334	ENSLAFG00000018578	GTPBP4	100	82.334	Loxodonta_africana
ENSAMXG00000019771	gtpbp4	100	83.444	ENSMFAG00000046251	GTPBP4	100	83.444	Macaca_fascicularis
ENSAMXG00000019771	gtpbp4	100	80.298	ENSMMUG00000010813	GTPBP4	100	80.298	Macaca_mulatta
ENSAMXG00000019771	gtpbp4	100	83.278	ENSMNEG00000044366	GTPBP4	100	83.278	Macaca_nemestrina
ENSAMXG00000019771	gtpbp4	100	83.113	ENSMLEG00000039605	GTPBP4	100	83.113	Mandrillus_leucophaeus
ENSAMXG00000019771	gtpbp4	100	89.274	ENSMAMG00000013763	gtpbp4	92	89.274	Mastacembelus_armatus
ENSAMXG00000019771	gtpbp4	100	90.066	ENSMZEG00005006621	gtpbp4	100	90.066	Maylandia_zebra
ENSAMXG00000019771	gtpbp4	100	82.965	ENSMAUG00000000571	Gtpbp4	100	82.965	Mesocricetus_auratus
ENSAMXG00000019771	gtpbp4	100	82.616	ENSMICG00000013332	GTPBP4	100	82.616	Microcebus_murinus
ENSAMXG00000019771	gtpbp4	100	82.965	ENSMOCG00000002209	Gtpbp4	100	82.965	Microtus_ochrogaster
ENSAMXG00000019771	gtpbp4	100	88.907	ENSMMOG00000011257	gtpbp4	100	88.907	Mola_mola
ENSAMXG00000019771	gtpbp4	100	83.438	ENSMODG00000005978	GTPBP4	100	83.438	Monodelphis_domestica
ENSAMXG00000019771	gtpbp4	100	88.328	ENSMALG00000012488	gtpbp4	100	88.328	Monopterus_albus
ENSAMXG00000019771	gtpbp4	99	82.035	MGP_CAROLIEiJ_G0018215	Gtpbp4	99	82.035	Mus_caroli
ENSAMXG00000019771	gtpbp4	100	82.808	ENSMUSG00000021149	Gtpbp4	93	92.810	Mus_musculus
ENSAMXG00000019771	gtpbp4	100	82.492	MGP_PahariEiJ_G0019265	Gtpbp4	100	82.492	Mus_pahari
ENSAMXG00000019771	gtpbp4	99	82.989	MGP_SPRETEiJ_G0019073	Gtpbp4	99	82.989	Mus_spretus
ENSAMXG00000019771	gtpbp4	93	81.090	ENSMPUG00000016221	GTPBP4	100	81.090	Mustela_putorius_furo
ENSAMXG00000019771	gtpbp4	100	82.334	ENSMLUG00000028192	GTPBP4	100	82.334	Myotis_lucifugus
ENSAMXG00000019771	gtpbp4	100	83.281	ENSNGAG00000015364	Gtpbp4	100	83.281	Nannospalax_galili
ENSAMXG00000019771	gtpbp4	87	85.556	ENSNBRG00000019965	gtpbp4	86	85.556	Neolamprologus_brichardi
ENSAMXG00000019771	gtpbp4	100	83.113	ENSNLEG00000013495	GTPBP4	100	83.113	Nomascus_leucogenys
ENSAMXG00000019771	gtpbp4	64	84.848	ENSMEUG00000016215	-	72	84.848	Notamacropus_eugenii
ENSAMXG00000019771	gtpbp4	89	88.679	ENSOPRG00000008671	GTPBP4	86	88.679	Ochotona_princeps
ENSAMXG00000019771	gtpbp4	100	82.334	ENSODEG00000000962	-	100	82.334	Octodon_degus
ENSAMXG00000019771	gtpbp4	100	80.284	ENSODEG00000019152	-	100	80.284	Octodon_degus
ENSAMXG00000019771	gtpbp4	100	89.905	ENSONIG00000017707	gtpbp4	100	89.905	Oreochromis_niloticus
ENSAMXG00000019771	gtpbp4	99	81.300	ENSOANG00000006095	-	99	81.300	Ornithorhynchus_anatinus
ENSAMXG00000019771	gtpbp4	100	80.757	ENSOCUG00000016120	-	100	80.757	Oryctolagus_cuniculus
ENSAMXG00000019771	gtpbp4	59	79.420	ENSOCUG00000014716	-	100	79.420	Oryctolagus_cuniculus
ENSAMXG00000019771	gtpbp4	100	86.120	ENSORLG00000006151	gtpbp4	100	86.120	Oryzias_latipes
ENSAMXG00000019771	gtpbp4	100	86.120	ENSORLG00020020899	gtpbp4	100	86.120	Oryzias_latipes_hni
ENSAMXG00000019771	gtpbp4	100	85.962	ENSORLG00015020562	gtpbp4	100	85.962	Oryzias_latipes_hsok
ENSAMXG00000019771	gtpbp4	100	85.762	ENSOMEG00000019684	gtpbp4	100	85.762	Oryzias_melastigma
ENSAMXG00000019771	gtpbp4	100	82.965	ENSOGAG00000011941	GTPBP4	100	82.965	Otolemur_garnettii
ENSAMXG00000019771	gtpbp4	100	82.104	ENSOARG00000015047	GTPBP4	100	82.261	Ovis_aries
ENSAMXG00000019771	gtpbp4	100	83.278	ENSPPAG00000042066	GTPBP4	100	83.278	Pan_paniscus
ENSAMXG00000019771	gtpbp4	100	82.177	ENSPPRG00000009895	GTPBP4	100	82.177	Panthera_pardus
ENSAMXG00000019771	gtpbp4	100	82.334	ENSPTIG00000008569	GTPBP4	100	82.334	Panthera_tigris_altaica
ENSAMXG00000019771	gtpbp4	72	86.534	ENSPTRG00000002236	GTPBP4	86	87.054	Pan_troglodytes
ENSAMXG00000019771	gtpbp4	100	83.278	ENSPANG00000023543	GTPBP4	100	83.278	Papio_anubis
ENSAMXG00000019771	gtpbp4	100	89.274	ENSPKIG00000012301	gtpbp4	100	89.274	Paramormyrops_kingsleyae
ENSAMXG00000019771	gtpbp4	56	90.756	ENSPSIG00000005442	GTPBP4	93	90.756	Pelodiscus_sinensis
ENSAMXG00000019771	gtpbp4	100	83.912	ENSPMGG00000001462	gtpbp4	100	83.912	Periophthalmus_magnuspinnatus
ENSAMXG00000019771	gtpbp4	100	82.650	ENSPEMG00000015091	-	100	82.650	Peromyscus_maniculatus_bairdii
ENSAMXG00000019771	gtpbp4	100	61.295	ENSPEMG00000012279	-	100	60.883	Peromyscus_maniculatus_bairdii
ENSAMXG00000019771	gtpbp4	100	76.777	ENSPMAG00000000905	gtpbp4	100	76.777	Petromyzon_marinus
ENSAMXG00000019771	gtpbp4	100	82.965	ENSPCIG00000026082	GTPBP4	100	82.965	Phascolarctos_cinereus
ENSAMXG00000019771	gtpbp4	100	87.224	ENSPFOG00000000026	gtpbp4	100	87.224	Poecilia_formosa
ENSAMXG00000019771	gtpbp4	92	88.205	ENSPLAG00000002898	gtpbp4	97	88.336	Poecilia_latipinna
ENSAMXG00000019771	gtpbp4	100	87.583	ENSPMEG00000016422	gtpbp4	100	87.583	Poecilia_mexicana
ENSAMXG00000019771	gtpbp4	100	87.583	ENSPREG00000019870	gtpbp4	100	87.583	Poecilia_reticulata
ENSAMXG00000019771	gtpbp4	100	83.123	ENSPPYG00000002037	GTPBP4	100	83.123	Pongo_abelii
ENSAMXG00000019771	gtpbp4	54	88.667	ENSPCAG00000006152	-	50	88.667	Procavia_capensis
ENSAMXG00000019771	gtpbp4	100	77.603	ENSPCOG00000014382	-	100	77.603	Propithecus_coquereli
ENSAMXG00000019771	gtpbp4	97	78.049	ENSPCOG00000014602	-	100	77.886	Propithecus_coquereli
ENSAMXG00000019771	gtpbp4	91	90.625	ENSPVAG00000005882	GTPBP4	86	88.994	Pteropus_vampyrus
ENSAMXG00000019771	gtpbp4	100	83.775	ENSPNYG00000024251	gtpbp4	100	83.775	Pundamilia_nyererei
ENSAMXG00000019771	gtpbp4	100	93.377	ENSPNAG00000019977	gtpbp4	100	93.377	Pygocentrus_nattereri
ENSAMXG00000019771	gtpbp4	100	81.918	ENSRNOG00000016217	Gtpbp4	100	82.075	Rattus_norvegicus
ENSAMXG00000019771	gtpbp4	100	83.113	ENSRBIG00000028875	GTPBP4	100	83.113	Rhinopithecus_bieti
ENSAMXG00000019771	gtpbp4	100	83.113	ENSRROG00000030798	GTPBP4	100	83.113	Rhinopithecus_roxellana
ENSAMXG00000019771	gtpbp4	99	45.609	YPL093W	-	99	45.609	Saccharomyces_cerevisiae
ENSAMXG00000019771	gtpbp4	100	82.673	ENSSBOG00000028421	GTPBP4	100	82.673	Saimiri_boliviensis_boliviensis
ENSAMXG00000019771	gtpbp4	99	83.599	ENSSHAG00000014713	GTPBP4	94	83.599	Sarcophilus_harrisii
ENSAMXG00000019771	gtpbp4	100	89.073	ENSSFOG00015003167	gtpbp4	100	89.073	Scleropages_formosus
ENSAMXG00000019771	gtpbp4	100	87.224	ENSSMAG00000005863	gtpbp4	100	87.224	Scophthalmus_maximus
ENSAMXG00000019771	gtpbp4	100	89.238	ENSSDUG00000006534	gtpbp4	100	89.238	Seriola_dumerili
ENSAMXG00000019771	gtpbp4	100	89.238	ENSSLDG00000020688	gtpbp4	100	89.238	Seriola_lalandi_dorsalis
ENSAMXG00000019771	gtpbp4	64	96.040	ENSSARG00000003409	-	79	96.040	Sorex_araneus
ENSAMXG00000019771	gtpbp4	100	83.281	ENSSPUG00000002153	GTPBP4	100	83.281	Sphenodon_punctatus
ENSAMXG00000019771	gtpbp4	63	78.338	ENSSPAG00000014583	gtpbp4	100	78.338	Stegastes_partitus
ENSAMXG00000019771	gtpbp4	100	80.442	ENSSSCG00000028602	GTPBP4	100	80.442	Sus_scrofa
ENSAMXG00000019771	gtpbp4	99	83.254	ENSTGUG00000000820	GTPBP4	100	83.573	Taeniopygia_guttata
ENSAMXG00000019771	gtpbp4	100	87.252	ENSTRUG00000003900	gtpbp4	100	87.252	Takifugu_rubripes
ENSAMXG00000019771	gtpbp4	100	88.486	ENSTNIG00000007992	gtpbp4	100	88.486	Tetraodon_nigroviridis
ENSAMXG00000019771	gtpbp4	100	68.232	ENSTBEG00000003613	GTPBP4	100	68.232	Tupaia_belangeri
ENSAMXG00000019771	gtpbp4	100	76.562	ENSTTRG00000011163	GTPBP4	100	76.562	Tursiops_truncatus
ENSAMXG00000019771	gtpbp4	100	81.623	ENSUAMG00000013191	GTPBP4	100	81.623	Ursus_americanus
ENSAMXG00000019771	gtpbp4	93	80.409	ENSUMAG00000016138	GTPBP4	100	80.409	Ursus_maritimus
ENSAMXG00000019771	gtpbp4	100	81.703	ENSVVUG00000008608	GTPBP4	98	81.703	Vulpes_vulpes
ENSAMXG00000019771	gtpbp4	100	73.934	ENSXETG00000018097	gtpbp4	100	74.398	Xenopus_tropicalis
ENSAMXG00000019771	gtpbp4	100	80.534	ENSXCOG00000019953	gtpbp4	98	80.534	Xiphophorus_couchianus
ENSAMXG00000019771	gtpbp4	100	86.499	ENSXMAG00000006719	gtpbp4	100	86.499	Xiphophorus_maculatus