EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000019979 (Gene tree)
Gene ID: 103037167
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 52502 bases
Position: chr14:13933422-13985923
Accession: 103037167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020594	tRNA-synt_1g	PF09334.11	8.8e-17	1	2
ENSAMXP00000020594	tRNA-synt_1g	PF09334.11	8.8e-17	2	2
ENSAMXP00000036075	tRNA-synt_1g	PF09334.11	8.8e-17	1	2
ENSAMXP00000036075	tRNA-synt_1g	PF09334.11	8.8e-17	2	2
ENSAMXP00000020594	Anticodon_1	PF08264.13	8.9e-16	1	1
ENSAMXP00000036075	Anticodon_1	PF08264.13	8.9e-16	1	1
ENSAMXP00000020594	tRNA-synt_1	PF00133.22	3.4e-39	1	2
ENSAMXP00000020594	tRNA-synt_1	PF00133.22	3.4e-39	2	2
ENSAMXP00000036075	tRNA-synt_1	PF00133.22	3.4e-39	1	2
ENSAMXP00000036075	tRNA-synt_1	PF00133.22	3.4e-39	2	2
ENSAMXP00000020594	tRNA-synt_1e	PF01406.19	5.1e-06	1	1
ENSAMXP00000036075	tRNA-synt_1e	PF01406.19	5.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020594	-	5572	-	ENSAMXP00000020594	1178 (aa)	-	W5LL82
ENSAMXT00000040430	-	5572	XM_022676216	ENSAMXP00000036075	1178 (aa)	XP_022531937	UPI000BBD9ED7

Gene Model

Click here to download ENSAMXG00000019979's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000019979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000019979	larsb	100	80.136	ENSG00000133706	LARS	100	80.944	Homo_sapiens
ENSAMXG00000019979	larsb	100	88.449	ENSAPOG00000010585	larsb	100	88.929	Acanthochromis_polyacanthus
ENSAMXG00000019979	larsb	99	80.221	ENSAMEG00000017584	LARS	100	80.221	Ailuropoda_melanoleuca
ENSAMXG00000019979	larsb	100	85.702	ENSACIG00000014026	larsb	100	85.726	Amphilophus_citrinellus
ENSAMXG00000019979	larsb	100	88.439	ENSAOCG00000016931	larsb	100	88.439	Amphiprion_ocellaris
ENSAMXG00000019979	larsb	100	88.523	ENSAPEG00000017720	larsb	100	88.523	Amphiprion_percula
ENSAMXG00000019979	larsb	100	84.563	ENSATEG00000010441	larsb	99	84.733	Anabas_testudineus
ENSAMXG00000019979	larsb	96	80.458	ENSAPLG00000008145	LARS	100	80.458	Anas_platyrhynchos
ENSAMXG00000019979	larsb	100	78.438	ENSACAG00000013916	LARS	99	79.099	Anolis_carolinensis
ENSAMXG00000019979	larsb	100	71.222	ENSANAG00000014375	LARS	100	71.222	Aotus_nancymaae
ENSAMXG00000019979	larsb	100	86.920	ENSACLG00000010881	larsb	100	86.920	Astatotilapia_calliptera
ENSAMXG00000019979	larsb	100	79.542	ENSBTAG00000006765	LARS	100	79.542	Bos_taurus
ENSAMXG00000019979	larsb	99	55.481	WBGene00003073	lars-1	99	55.649	Caenorhabditis_elegans
ENSAMXG00000019979	larsb	100	80.221	ENSCJAG00000021314	LARS	100	80.944	Callithrix_jacchus
ENSAMXG00000019979	larsb	100	80.390	ENSCAFG00000006431	LARS	100	80.390	Canis_familiaris
ENSAMXG00000019979	larsb	99	80.442	ENSCAFG00020025009	LARS	99	80.442	Canis_lupus_dingo
ENSAMXG00000019979	larsb	100	79.796	ENSCHIG00000014949	LARS	100	79.796	Capra_hircus
ENSAMXG00000019979	larsb	100	79.711	ENSTSYG00000001253	LARS	100	79.711	Carlito_syrichta
ENSAMXG00000019979	larsb	96	63.084	ENSCAPG00000015676	LARS	97	63.260	Cavia_aperea
ENSAMXG00000019979	larsb	100	78.947	ENSCPOG00000012329	LARS	100	78.947	Cavia_porcellus
ENSAMXG00000019979	larsb	99	80.681	ENSCCAG00000020789	LARS	99	80.681	Cebus_capucinus
ENSAMXG00000019979	larsb	98	80.017	ENSCATG00000033463	LARS	100	80.766	Cercocebus_atys
ENSAMXG00000019979	larsb	100	79.457	ENSCLAG00000011193	LARS	100	79.457	Chinchilla_lanigera
ENSAMXG00000019979	larsb	99	80.017	ENSCSAG00000012280	LARS	97	80.017	Chlorocebus_sabaeus
ENSAMXG00000019979	larsb	90	73.744	ENSCHOG00000009309	LARS	85	79.381	Choloepus_hoffmanni
ENSAMXG00000019979	larsb	99	80.527	ENSCPBG00000008415	LARS	99	81.498	Chrysemys_picta_bellii
ENSAMXG00000019979	larsb	99	64.153	ENSCING00000008535	-	99	64.098	Ciona_intestinalis
ENSAMXG00000019979	larsb	99	63.983	ENSCSAVG00000009040	-	100	68.684	Ciona_savignyi
ENSAMXG00000019979	larsb	100	80.051	ENSCANG00000031137	LARS	100	80.051	Colobus_angolensis_palliatus
ENSAMXG00000019979	larsb	93	75.114	ENSCGRG00001004647	Lars	99	75.114	Cricetulus_griseus_chok1gshd
ENSAMXG00000019979	larsb	100	76.675	ENSCGRG00000007284	Lars	100	76.675	Cricetulus_griseus_crigri
ENSAMXG00000019979	larsb	100	87.099	ENSCSEG00000014984	larsb	100	87.268	Cynoglossus_semilaevis
ENSAMXG00000019979	larsb	100	87.848	ENSCVAG00000014685	larsb	100	88.017	Cyprinodon_variegatus
ENSAMXG00000019979	larsb	68	91.114	ENSDARG00000019280	larsb	100	91.114	Danio_rerio
ENSAMXG00000019979	larsb	96	79.035	ENSDNOG00000017963	LARS	100	79.825	Dasypus_novemcinctus
ENSAMXG00000019979	larsb	100	75.169	ENSDORG00000014913	Lars	100	75.169	Dipodomys_ordii
ENSAMXG00000019979	larsb	99	59.060	FBgn0284253	LeuRS	99	59.144	Drosophila_melanogaster
ENSAMXG00000019979	larsb	94	64.892	ENSETEG00000003145	LARS	95	78.351	Echinops_telfairi
ENSAMXG00000019979	larsb	92	59.762	ENSEBUG00000014985	larsb	97	59.762	Eptatretus_burgeri
ENSAMXG00000019979	larsb	100	80.390	ENSEASG00005020569	LARS	100	80.886	Equus_asinus_asinus
ENSAMXG00000019979	larsb	100	80.306	ENSECAG00000008963	LARS	100	81.122	Equus_caballus
ENSAMXG00000019979	larsb	92	66.910	ENSEEUG00000014854	LARS	92	66.910	Erinaceus_europaeus
ENSAMXG00000019979	larsb	100	87.436	ENSELUG00000023311	larsb	100	87.436	Esox_lucius
ENSAMXG00000019979	larsb	99	80.272	ENSFCAG00000008715	LARS	100	81.373	Felis_catus
ENSAMXG00000019979	larsb	100	80.221	ENSFALG00000003209	LARS	93	80.221	Ficedula_albicollis
ENSAMXG00000019979	larsb	100	79.202	ENSFDAG00000020764	LARS	100	79.202	Fukomys_damarensis
ENSAMXG00000019979	larsb	91	86.501	ENSFHEG00000010437	larsb	100	86.777	Fundulus_heteroclitus
ENSAMXG00000019979	larsb	99	84.792	ENSGMOG00000013645	larsb	99	84.792	Gadus_morhua
ENSAMXG00000019979	larsb	100	80.475	ENSGALG00000007494	LARS	100	80.475	Gallus_gallus
ENSAMXG00000019979	larsb	100	87.004	ENSGAFG00000005029	larsb	100	87.173	Gambusia_affinis
ENSAMXG00000019979	larsb	99	86.480	ENSGACG00000020720	larsb	99	86.480	Gasterosteus_aculeatus
ENSAMXG00000019979	larsb	99	79.507	ENSGAGG00000002353	LARS	99	79.507	Gopherus_agassizii
ENSAMXG00000019979	larsb	100	80.051	ENSGGOG00000004103	LARS	100	80.051	Gorilla_gorilla
ENSAMXG00000019979	larsb	99	85.860	ENSHBUG00000003051	larsb	100	87.670	Haplochromis_burtoni
ENSAMXG00000019979	larsb	100	79.287	ENSHGLG00000006937	LARS	100	79.287	Heterocephalus_glaber_female
ENSAMXG00000019979	larsb	100	79.287	ENSHGLG00100002801	LARS	100	79.287	Heterocephalus_glaber_male
ENSAMXG00000019979	larsb	99	85.642	ENSHCOG00000003651	larsb	100	85.642	Hippocampus_comes
ENSAMXG00000019979	larsb	100	88.710	ENSIPUG00000010756	lars	100	89.119	Ictalurus_punctatus
ENSAMXG00000019979	larsb	100	79.796	ENSSTOG00000002356	LARS	100	79.796	Ictidomys_tridecemlineatus
ENSAMXG00000019979	larsb	100	78.523	ENSJJAG00000015265	Lars	100	78.523	Jaculus_jaculus
ENSAMXG00000019979	larsb	100	87.342	ENSKMAG00000009903	larsb	100	87.342	Kryptolebias_marmoratus
ENSAMXG00000019979	larsb	100	87.511	ENSLBEG00000025237	larsb	100	87.690	Labrus_bergylta
ENSAMXG00000019979	larsb	100	80.577	ENSLACG00000009321	LARS	100	81.086	Latimeria_chalumnae
ENSAMXG00000019979	larsb	99	83.517	ENSLOCG00000010442	larsb	100	83.178	Lepisosteus_oculatus
ENSAMXG00000019979	larsb	99	79.542	ENSLAFG00000000318	LARS	100	79.507	Loxodonta_africana
ENSAMXG00000019979	larsb	100	80.136	ENSMFAG00000038685	LARS	100	80.136	Macaca_fascicularis
ENSAMXG00000019979	larsb	100	79.966	ENSMMUG00000029787	LARS	100	79.966	Macaca_mulatta
ENSAMXG00000019979	larsb	99	77.976	ENSMNEG00000044014	LARS	99	77.976	Macaca_nemestrina
ENSAMXG00000019979	larsb	99	80.187	ENSMLEG00000037563	LARS	99	80.187	Mandrillus_leucophaeus
ENSAMXG00000019979	larsb	100	87.426	ENSMAMG00000021385	larsb	100	87.426	Mastacembelus_armatus
ENSAMXG00000019979	larsb	100	86.835	ENSMZEG00005002662	larsb	100	86.835	Maylandia_zebra
ENSAMXG00000019979	larsb	96	81.338	ENSMGAG00000009388	LARS	100	81.338	Meleagris_gallopavo
ENSAMXG00000019979	larsb	99	69.813	ENSMAUG00000003063	Lars	99	69.303	Mesocricetus_auratus
ENSAMXG00000019979	larsb	100	66.723	ENSMICG00000035435	-	100	66.723	Microcebus_murinus
ENSAMXG00000019979	larsb	100	80.475	ENSMICG00000035589	-	100	80.475	Microcebus_murinus
ENSAMXG00000019979	larsb	100	79.304	ENSMOCG00000002092	Lars	100	79.304	Microtus_ochrogaster
ENSAMXG00000019979	larsb	100	84.544	ENSMMOG00000013802	larsb	100	84.713	Mola_mola
ENSAMXG00000019979	larsb	99	73.980	ENSMODG00000010231	LARS	99	73.980	Monodelphis_domestica
ENSAMXG00000019979	larsb	99	85.714	ENSMALG00000018444	larsb	99	85.714	Monopterus_albus
ENSAMXG00000019979	larsb	100	79.050	MGP_CAROLIEiJ_G0022225	Lars	100	79.050	Mus_caroli
ENSAMXG00000019979	larsb	100	78.711	ENSMUSG00000024493	Lars	100	78.711	Mus_musculus
ENSAMXG00000019979	larsb	100	78.711	MGP_PahariEiJ_G0018958	Lars	100	78.711	Mus_pahari
ENSAMXG00000019979	larsb	100	79.050	MGP_SPRETEiJ_G0023135	Lars	100	79.050	Mus_spretus
ENSAMXG00000019979	larsb	100	80.051	ENSMPUG00000007844	LARS	100	80.051	Mustela_putorius_furo
ENSAMXG00000019979	larsb	99	78.929	ENSMLUG00000001125	LARS	100	78.929	Myotis_lucifugus
ENSAMXG00000019979	larsb	100	77.929	ENSNGAG00000011596	Lars	100	77.929	Nannospalax_galili
ENSAMXG00000019979	larsb	100	86.751	ENSNBRG00000005764	larsb	100	86.751	Neolamprologus_brichardi
ENSAMXG00000019979	larsb	99	79.507	ENSNLEG00000009816	LARS	99	79.507	Nomascus_leucogenys
ENSAMXG00000019979	larsb	53	81.081	ENSMEUG00000002332	-	60	73.868	Notamacropus_eugenii
ENSAMXG00000019979	larsb	78	82.888	ENSOPRG00000003076	LARS	83	81.818	Ochotona_princeps
ENSAMXG00000019979	larsb	99	77.362	ENSODEG00000004882	LARS	99	77.362	Octodon_degus
ENSAMXG00000019979	larsb	100	87.004	ENSONIG00000008493	larsb	100	87.004	Oreochromis_niloticus
ENSAMXG00000019979	larsb	100	76.585	ENSOANG00000005755	LARS	100	76.585	Ornithorhynchus_anatinus
ENSAMXG00000019979	larsb	100	80.136	ENSOCUG00000015684	LARS	100	80.136	Oryctolagus_cuniculus
ENSAMXG00000019979	larsb	100	87.426	ENSORLG00000001622	larsb	100	87.595	Oryzias_latipes
ENSAMXG00000019979	larsb	100	87.511	ENSORLG00020019950	larsb	100	87.679	Oryzias_latipes_hni
ENSAMXG00000019979	larsb	100	87.595	ENSORLG00015003895	larsb	100	87.764	Oryzias_latipes_hsok
ENSAMXG00000019979	larsb	100	87.679	ENSOMEG00000005677	larsb	100	87.679	Oryzias_melastigma
ENSAMXG00000019979	larsb	96	78.059	ENSOGAG00000008750	LARS	100	78.059	Otolemur_garnettii
ENSAMXG00000019979	larsb	100	79.542	ENSOARG00000015911	-	99	79.542	Ovis_aries
ENSAMXG00000019979	larsb	99	79.609	ENSOARG00000002454	-	100	79.609	Ovis_aries
ENSAMXG00000019979	larsb	99	80.102	ENSPPAG00000027964	LARS	99	80.102	Pan_paniscus
ENSAMXG00000019979	larsb	100	80.390	ENSPPRG00000023492	LARS	100	80.390	Panthera_pardus
ENSAMXG00000019979	larsb	100	80.221	ENSPTIG00000013110	LARS	100	80.221	Panthera_tigris_altaica
ENSAMXG00000019979	larsb	100	79.966	ENSPTRG00000017372	LARS	100	79.966	Pan_troglodytes
ENSAMXG00000019979	larsb	100	80.136	ENSPANG00000002663	LARS	100	80.136	Papio_anubis
ENSAMXG00000019979	larsb	98	85.690	ENSPKIG00000006650	larsb	99	83.404	Paramormyrops_kingsleyae
ENSAMXG00000019979	larsb	99	80.187	ENSPSIG00000015641	LARS	100	80.187	Pelodiscus_sinensis
ENSAMXG00000019979	larsb	68	88.375	ENSPMGG00000019556	LARS	100	88.375	Periophthalmus_magnuspinnatus
ENSAMXG00000019979	larsb	100	75.148	ENSPEMG00000010933	Lars	100	75.148	Peromyscus_maniculatus_bairdii
ENSAMXG00000019979	larsb	51	62.189	ENSPMAG00000005301	larsb	99	62.189	Petromyzon_marinus
ENSAMXG00000019979	larsb	100	79.372	ENSPCIG00000030572	LARS	100	79.372	Phascolarctos_cinereus
ENSAMXG00000019979	larsb	100	87.257	ENSPFOG00000002361	larsb	100	87.426	Poecilia_formosa
ENSAMXG00000019979	larsb	100	87.426	ENSPLAG00000016550	larsb	100	87.595	Poecilia_latipinna
ENSAMXG00000019979	larsb	100	87.089	ENSPMEG00000018422	larsb	100	87.257	Poecilia_mexicana
ENSAMXG00000019979	larsb	100	87.089	ENSPREG00000005668	larsb	100	87.257	Poecilia_reticulata
ENSAMXG00000019979	larsb	99	78.401	ENSPPYG00000015908	LARS	97	78.401	Pongo_abelii
ENSAMXG00000019979	larsb	89	71.875	ENSPCAG00000005621	LARS	96	66.370	Procavia_capensis
ENSAMXG00000019979	larsb	100	79.032	ENSPCOG00000019325	LARS	100	79.032	Propithecus_coquereli
ENSAMXG00000019979	larsb	96	71.831	ENSPVAG00000011237	LARS	99	72.095	Pteropus_vampyrus
ENSAMXG00000019979	larsb	100	86.751	ENSPNYG00000015254	larsb	100	86.751	Pundamilia_nyererei
ENSAMXG00000019979	larsb	100	91.511	ENSPNAG00000027191	larsb	100	91.511	Pygocentrus_nattereri
ENSAMXG00000019979	larsb	100	78.626	ENSRNOG00000018304	Lars	100	78.626	Rattus_norvegicus
ENSAMXG00000019979	larsb	94	78.971	ENSRBIG00000043198	LARS	99	78.971	Rhinopithecus_bieti
ENSAMXG00000019979	larsb	90	46.056	YPL160W	CDC60	99	46.286	Saccharomyces_cerevisiae
ENSAMXG00000019979	larsb	99	77.891	ENSSBOG00000026661	LARS	100	80.922	Saimiri_boliviensis_boliviensis
ENSAMXG00000019979	larsb	100	80.322	ENSSHAG00000006084	LARS	100	80.322	Sarcophilus_harrisii
ENSAMXG00000019979	larsb	97	86.555	ENSSFOG00015018117	larsb	90	86.555	Scleropages_formosus
ENSAMXG00000019979	larsb	88	87.919	ENSSMAG00000004078	larsb	97	88.111	Scophthalmus_maximus
ENSAMXG00000019979	larsb	100	88.439	ENSSDUG00000021142	larsb	100	88.439	Seriola_dumerili
ENSAMXG00000019979	larsb	100	88.523	ENSSLDG00000007054	larsb	100	88.523	Seriola_lalandi_dorsalis
ENSAMXG00000019979	larsb	85	72.340	ENSSARG00000013481	LARS	85	71.852	Sorex_araneus
ENSAMXG00000019979	larsb	100	80.407	ENSSPUG00000013805	LARS	100	80.492	Sphenodon_punctatus
ENSAMXG00000019979	larsb	100	88.439	ENSSPAG00000012124	larsb	100	88.439	Stegastes_partitus
ENSAMXG00000019979	larsb	100	76.740	ENSSSCG00000014411	LARS	100	76.740	Sus_scrofa
ENSAMXG00000019979	larsb	99	80.017	ENSTGUG00000000092	-	99	80.017	Taeniopygia_guttata
ENSAMXG00000019979	larsb	100	84.641	ENSTRUG00000005358	larsb	100	84.641	Takifugu_rubripes
ENSAMXG00000019979	larsb	99	82.587	ENSTNIG00000018214	larsb	100	82.587	Tetraodon_nigroviridis
ENSAMXG00000019979	larsb	91	79.352	ENSTBEG00000003757	LARS	100	67.401	Tupaia_belangeri
ENSAMXG00000019979	larsb	96	77.269	ENSTTRG00000016712	LARS	96	77.269	Tursiops_truncatus
ENSAMXG00000019979	larsb	94	80.991	ENSUAMG00000019907	LARS	99	80.991	Ursus_americanus
ENSAMXG00000019979	larsb	100	80.475	ENSUMAG00000010585	LARS	100	80.475	Ursus_maritimus
ENSAMXG00000019979	larsb	92	78.356	ENSVPAG00000000557	LARS	92	78.356	Vicugna_pacos
ENSAMXG00000019979	larsb	100	80.475	ENSVVUG00000021124	LARS	100	80.475	Vulpes_vulpes
ENSAMXG00000019979	larsb	100	81.679	ENSXETG00000002320	lars	100	81.679	Xenopus_tropicalis
ENSAMXG00000019979	larsb	100	86.582	ENSXMAG00000001454	larsb	100	86.835	Xiphophorus_maculatus