EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020177 (Gene tree)
Gene ID: 103029270
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14269 bases
Position: chrAPWO02000034.1:704843-719111
Accession: 103029270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020779	DUF1604	PF07713.13	5.3e-37	1	1
ENSAMXP00000020779	G-patch	PF01585.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020779	-	4363	XM_007244871	ENSAMXP00000020779	932 (aa)	XP_007244933	W5LLR7

Gene Model

Click here to download ENSAMXG00000020177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020177's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020177	gpatch1	97	51.888	ENSG00000076650	GPATCH1	75	75.000	Homo_sapiens
ENSAMXG00000020177	gpatch1	97	52.527	ENSAMEG00000015575	GPATCH1	90	51.868	Ailuropoda_melanoleuca
ENSAMXG00000020177	gpatch1	86	78.919	ENSAOCG00000006668	gpatch1	75	78.919	Amphiprion_ocellaris
ENSAMXG00000020177	gpatch1	98	56.681	ENSAPEG00000000026	gpatch1	93	56.203	Amphiprion_percula
ENSAMXG00000020177	gpatch1	96	57.500	ENSATEG00000014494	gpatch1	93	57.037	Anabas_testudineus
ENSAMXG00000020177	gpatch1	96	50.532	ENSAPLG00000007584	GPATCH1	98	49.466	Anas_platyrhynchos
ENSAMXG00000020177	gpatch1	97	51.133	ENSANAG00000027002	GPATCH1	90	51.254	Aotus_nancymaae
ENSAMXG00000020177	gpatch1	86	60.513	ENSACLG00000024740	gpatch1	85	59.086	Astatotilapia_calliptera
ENSAMXG00000020177	gpatch1	97	51.522	ENSBTAG00000000721	GPATCH1	91	52.464	Bos_taurus
ENSAMXG00000020177	gpatch1	97	51.238	ENSCJAG00000000684	GPATCH1	90	51.036	Callithrix_jacchus
ENSAMXG00000020177	gpatch1	97	52.397	ENSCAFG00000007457	GPATCH1	77	52.495	Canis_familiaris
ENSAMXG00000020177	gpatch1	99	52.326	ENSCAFG00020019731	GPATCH1	91	52.495	Canis_lupus_dingo
ENSAMXG00000020177	gpatch1	97	52.511	ENSCHIG00000019626	GPATCH1	92	53.245	Capra_hircus
ENSAMXG00000020177	gpatch1	83	52.564	ENSCAPG00000008827	GPATCH1	90	50.227	Cavia_aperea
ENSAMXG00000020177	gpatch1	78	51.635	ENSCPOG00000024477	GPATCH1	90	51.698	Cavia_porcellus
ENSAMXG00000020177	gpatch1	97	50.378	ENSCCAG00000024676	GPATCH1	90	50.766	Cebus_capucinus
ENSAMXG00000020177	gpatch1	97	52.113	ENSCATG00000043637	GPATCH1	75	76.042	Cercocebus_atys
ENSAMXG00000020177	gpatch1	83	54.768	ENSCLAG00000003395	-	92	51.631	Chinchilla_lanigera
ENSAMXG00000020177	gpatch1	97	51.413	ENSCSAG00000004743	GPATCH1	90	50.491	Chlorocebus_sabaeus
ENSAMXG00000020177	gpatch1	83	64.815	ENSCHOG00000012865	GPATCH1	83	64.815	Choloepus_hoffmanni
ENSAMXG00000020177	gpatch1	83	54.604	ENSCPBG00000000666	GPATCH1	92	54.615	Chrysemys_picta_bellii
ENSAMXG00000020177	gpatch1	72	35.714	ENSCING00000012518	-	74	35.521	Ciona_intestinalis
ENSAMXG00000020177	gpatch1	89	50.205	ENSCANG00000012540	GPATCH1	89	53.828	Colobus_angolensis_palliatus
ENSAMXG00000020177	gpatch1	94	52.370	ENSCGRG00001016736	Gpatch1	92	51.505	Cricetulus_griseus_chok1gshd
ENSAMXG00000020177	gpatch1	95	43.840	ENSCGRG00000005069	Gpatch1	77	45.524	Cricetulus_griseus_crigri
ENSAMXG00000020177	gpatch1	83	56.332	ENSCSEG00000019456	-	75	83.505	Cynoglossus_semilaevis
ENSAMXG00000020177	gpatch1	97	67.568	ENSDARG00000033418	gpatch1	93	67.240	Danio_rerio
ENSAMXG00000020177	gpatch1	95	51.827	ENSDNOG00000005291	GPATCH1	95	51.852	Dasypus_novemcinctus
ENSAMXG00000020177	gpatch1	99	49.362	ENSDORG00000012546	Gpatch1	94	49.505	Dipodomys_ordii
ENSAMXG00000020177	gpatch1	73	32.676	FBgn0036386	CG8833	66	33.521	Drosophila_melanogaster
ENSAMXG00000020177	gpatch1	97	48.373	ENSETEG00000003626	GPATCH1	71	55.476	Echinops_telfairi
ENSAMXG00000020177	gpatch1	99	36.570	ENSEBUG00000011286	gpatch1	72	40.890	Eptatretus_burgeri
ENSAMXG00000020177	gpatch1	97	53.019	ENSEASG00005021162	GPATCH1	92	52.040	Equus_asinus_asinus
ENSAMXG00000020177	gpatch1	99	52.804	ENSECAG00000022743	GPATCH1	89	52.202	Equus_caballus
ENSAMXG00000020177	gpatch1	77	56.373	ENSEEUG00000012925	GPATCH1	73	56.373	Erinaceus_europaeus
ENSAMXG00000020177	gpatch1	86	64.165	ENSELUG00000018195	gpatch1	80	64.365	Esox_lucius
ENSAMXG00000020177	gpatch1	97	51.416	ENSFCAG00000014917	GPATCH1	91	51.307	Felis_catus
ENSAMXG00000020177	gpatch1	98	50.746	ENSFALG00000007821	GPATCH1	94	49.789	Ficedula_albicollis
ENSAMXG00000020177	gpatch1	94	51.461	ENSFDAG00000003871	GPATCH1	92	51.736	Fukomys_damarensis
ENSAMXG00000020177	gpatch1	82	61.521	ENSGMOG00000003830	gpatch1	88	61.521	Gadus_morhua
ENSAMXG00000020177	gpatch1	99	50.800	ENSGALG00000004839	GPATCH1	92	51.556	Gallus_gallus
ENSAMXG00000020177	gpatch1	96	54.357	ENSGACG00000017544	gpatch1	96	52.721	Gasterosteus_aculeatus
ENSAMXG00000020177	gpatch1	97	52.355	ENSGAGG00000010067	GPATCH1	90	52.245	Gopherus_agassizii
ENSAMXG00000020177	gpatch1	94	51.342	ENSGGOG00000010862	GPATCH1	90	51.294	Gorilla_gorilla
ENSAMXG00000020177	gpatch1	96	58.022	ENSHBUG00000023462	gpatch1	90	57.912	Haplochromis_burtoni
ENSAMXG00000020177	gpatch1	88	53.519	ENSHGLG00000009334	GPATCH1	91	50.754	Heterocephalus_glaber_female
ENSAMXG00000020177	gpatch1	88	53.398	ENSHGLG00100018074	GPATCH1	91	50.647	Heterocephalus_glaber_male
ENSAMXG00000020177	gpatch1	99	71.444	ENSIPUG00000014977	gpatch1	92	71.183	Ictalurus_punctatus
ENSAMXG00000020177	gpatch1	97	51.251	ENSSTOG00000003720	GPATCH1	91	51.900	Ictidomys_tridecemlineatus
ENSAMXG00000020177	gpatch1	86	53.998	ENSJJAG00000023765	Gpatch1	91	51.148	Jaculus_jaculus
ENSAMXG00000020177	gpatch1	86	58.507	ENSKMAG00000017950	gpatch1	93	54.632	Kryptolebias_marmoratus
ENSAMXG00000020177	gpatch1	98	56.873	ENSLBEG00000026527	gpatch1	91	57.460	Labrus_bergylta
ENSAMXG00000020177	gpatch1	97	53.653	ENSLACG00000008130	GPATCH1	94	53.905	Latimeria_chalumnae
ENSAMXG00000020177	gpatch1	86	60.123	ENSLOCG00000001800	gpatch1	92	56.897	Lepisosteus_oculatus
ENSAMXG00000020177	gpatch1	97	51.018	ENSLAFG00000013589	GPATCH1	90	51.447	Loxodonta_africana
ENSAMXG00000020177	gpatch1	97	52.298	ENSMFAG00000034418	GPATCH1	75	76.042	Macaca_fascicularis
ENSAMXG00000020177	gpatch1	97	52.179	ENSMMUG00000011790	GPATCH1	75	77.083	Macaca_mulatta
ENSAMXG00000020177	gpatch1	97	52.345	ENSMNEG00000045084	GPATCH1	75	73.958	Macaca_nemestrina
ENSAMXG00000020177	gpatch1	97	44.637	ENSMLEG00000043840	GPATCH1	89	44.372	Mandrillus_leucophaeus
ENSAMXG00000020177	gpatch1	86	60.147	ENSMZEG00005001926	gpatch1	80	60.024	Maylandia_zebra
ENSAMXG00000020177	gpatch1	96	51.835	ENSMGAG00000005775	GPATCH1	92	50.703	Meleagris_gallopavo
ENSAMXG00000020177	gpatch1	97	46.776	ENSMICG00000004829	GPATCH1	93	47.065	Microcebus_murinus
ENSAMXG00000020177	gpatch1	97	53.050	ENSMOCG00000000174	Gpatch1	92	52.207	Microtus_ochrogaster
ENSAMXG00000020177	gpatch1	89	55.205	ENSMMOG00000002140	gpatch1	87	55.985	Mola_mola
ENSAMXG00000020177	gpatch1	98	52.221	ENSMODG00000012226	GPATCH1	90	51.354	Monodelphis_domestica
ENSAMXG00000020177	gpatch1	96	54.230	ENSMALG00000014386	gpatch1	93	55.401	Monopterus_albus
ENSAMXG00000020177	gpatch1	98	51.958	ENSMUSG00000063808	Gpatch1	98	73.958	Mus_musculus
ENSAMXG00000020177	gpatch1	98	53.491	MGP_PahariEiJ_G0012816	Gpatch1	98	75.000	Mus_pahari
ENSAMXG00000020177	gpatch1	98	51.429	MGP_SPRETEiJ_G0030681	Gpatch1	98	75.000	Mus_spretus
ENSAMXG00000020177	gpatch1	97	52.527	ENSMPUG00000007658	GPATCH1	90	52.308	Mustela_putorius_furo
ENSAMXG00000020177	gpatch1	97	50.925	ENSMLUG00000012161	GPATCH1	91	51.634	Myotis_lucifugus
ENSAMXG00000020177	gpatch1	97	51.728	ENSNGAG00000012455	Gpatch1	91	51.363	Nannospalax_galili
ENSAMXG00000020177	gpatch1	97	52.108	ENSNLEG00000007659	GPATCH1	75	75.000	Nomascus_leucogenys
ENSAMXG00000020177	gpatch1	80	49.467	ENSMEUG00000015174	GPATCH1	76	49.067	Notamacropus_eugenii
ENSAMXG00000020177	gpatch1	97	51.038	ENSODEG00000007103	GPATCH1	91	50.871	Octodon_degus
ENSAMXG00000020177	gpatch1	97	56.925	ENSONIG00000003302	gpatch1	92	57.440	Oreochromis_niloticus
ENSAMXG00000020177	gpatch1	99	51.528	ENSOANG00000012732	GPATCH1	95	51.739	Ornithorhynchus_anatinus
ENSAMXG00000020177	gpatch1	97	53.175	ENSOCUG00000015905	GPATCH1	91	53.125	Oryctolagus_cuniculus
ENSAMXG00000020177	gpatch1	98	56.277	ENSORLG00000018706	gpatch1	89	56.436	Oryzias_latipes
ENSAMXG00000020177	gpatch1	77	62.102	ENSOMEG00000022688	gpatch1	92	56.216	Oryzias_melastigma
ENSAMXG00000020177	gpatch1	86	55.377	ENSOGAG00000004016	GPATCH1	96	55.062	Otolemur_garnettii
ENSAMXG00000020177	gpatch1	97	53.231	ENSOARG00000004365	GPATCH1	90	53.304	Ovis_aries
ENSAMXG00000020177	gpatch1	97	51.348	ENSPPAG00000020990	GPATCH1	75	74.227	Pan_paniscus
ENSAMXG00000020177	gpatch1	97	51.525	ENSPPRG00000017245	GPATCH1	91	51.307	Panthera_pardus
ENSAMXG00000020177	gpatch1	97	52.360	ENSPTIG00000019649	GPATCH1	91	51.852	Panthera_tigris_altaica
ENSAMXG00000020177	gpatch1	97	51.348	ENSPTRG00000010803	GPATCH1	75	75.000	Pan_troglodytes
ENSAMXG00000020177	gpatch1	97	51.463	ENSPANG00000012374	GPATCH1	75	76.042	Papio_anubis
ENSAMXG00000020177	gpatch1	85	63.433	ENSPKIG00000020745	gpatch1	91	59.115	Paramormyrops_kingsleyae
ENSAMXG00000020177	gpatch1	96	53.007	ENSPSIG00000013433	GPATCH1	89	53.007	Pelodiscus_sinensis
ENSAMXG00000020177	gpatch1	97	52.345	ENSPEMG00000000636	Gpatch1	92	52.706	Peromyscus_maniculatus_bairdii
ENSAMXG00000020177	gpatch1	98	52.438	ENSPCIG00000021003	GPATCH1	96	51.616	Phascolarctos_cinereus
ENSAMXG00000020177	gpatch1	74	53.680	ENSPREG00000008264	gpatch1	79	54.066	Poecilia_reticulata
ENSAMXG00000020177	gpatch1	97	50.218	ENSPPYG00000009824	GPATCH1	90	50.328	Pongo_abelii
ENSAMXG00000020177	gpatch1	89	52.286	ENSPCAG00000005931	GPATCH1	84	51.667	Procavia_capensis
ENSAMXG00000020177	gpatch1	99	50.425	ENSPCOG00000009674	GPATCH1	96	50.823	Propithecus_coquereli
ENSAMXG00000020177	gpatch1	80	54.111	ENSPVAG00000017767	GPATCH1	76	53.979	Pteropus_vampyrus
ENSAMXG00000020177	gpatch1	86	59.731	ENSPNYG00000018189	gpatch1	95	58.756	Pundamilia_nyererei
ENSAMXG00000020177	gpatch1	98	80.066	ENSPNAG00000013187	gpatch1	92	79.737	Pygocentrus_nattereri
ENSAMXG00000020177	gpatch1	98	52.593	ENSRNOG00000011584	Gpatch1	93	52.570	Rattus_norvegicus
ENSAMXG00000020177	gpatch1	98	46.474	ENSRBIG00000034723	GPATCH1	92	46.312	Rhinopithecus_bieti
ENSAMXG00000020177	gpatch1	97	51.788	ENSRROG00000024428	GPATCH1	75	75.000	Rhinopithecus_roxellana
ENSAMXG00000020177	gpatch1	97	50.482	ENSSBOG00000034650	GPATCH1	91	50.875	Saimiri_boliviensis_boliviensis
ENSAMXG00000020177	gpatch1	98	52.273	ENSSHAG00000016016	GPATCH1	92	51.183	Sarcophilus_harrisii
ENSAMXG00000020177	gpatch1	99	58.178	ENSSFOG00015011535	gpatch1	89	60.639	Scleropages_formosus
ENSAMXG00000020177	gpatch1	98	53.319	ENSSMAG00000002883	gpatch1	95	53.229	Scophthalmus_maximus
ENSAMXG00000020177	gpatch1	86	59.390	ENSSDUG00000007444	gpatch1	92	56.204	Seriola_dumerili
ENSAMXG00000020177	gpatch1	86	59.124	ENSSLDG00000002856	gpatch1	89	59.486	Seriola_lalandi_dorsalis
ENSAMXG00000020177	gpatch1	75	57.183	ENSSARG00000004108	GPATCH1	70	57.803	Sorex_araneus
ENSAMXG00000020177	gpatch1	97	51.957	ENSSSCG00000002865	GPATCH1	93	52.799	Sus_scrofa
ENSAMXG00000020177	gpatch1	96	52.725	ENSTGUG00000009401	GPATCH1	90	52.591	Taeniopygia_guttata
ENSAMXG00000020177	gpatch1	86	56.843	ENSTRUG00000005785	-	89	54.736	Takifugu_rubripes
ENSAMXG00000020177	gpatch1	86	56.931	ENSTRUG00000025081	gpatch1	89	54.736	Takifugu_rubripes
ENSAMXG00000020177	gpatch1	86	56.166	ENSTNIG00000002554	gpatch1	97	56.265	Tetraodon_nigroviridis
ENSAMXG00000020177	gpatch1	64	52.841	ENSTBEG00000007750	-	80	52.841	Tupaia_belangeri
ENSAMXG00000020177	gpatch1	93	65.035	ENSTTRG00000012221	GPATCH1	93	46.902	Tursiops_truncatus
ENSAMXG00000020177	gpatch1	97	51.819	ENSUMAG00000014645	GPATCH1	77	75.000	Ursus_maritimus
ENSAMXG00000020177	gpatch1	86	67.630	ENSVPAG00000010313	GPATCH1	85	67.778	Vicugna_pacos
ENSAMXG00000020177	gpatch1	99	52.326	ENSVVUG00000016572	GPATCH1	91	52.505	Vulpes_vulpes
ENSAMXG00000020177	gpatch1	96	45.593	ENSXETG00000018276	gpatch1	96	49.159	Xenopus_tropicalis