EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020275 (Gene tree)
Gene ID: 103045299
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 38011 bases
Position: chr9:4626289-4664299
Accession: 103045299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020881	ResIII	PF04851.15	5.7e-17	1	1
ENSAMXP00000020881	DEAD	PF00270.29	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020881	-	5073	XM_022672627	ENSAMXP00000020881	1690 (aa)	XP_022528348	W5LM19

Gene Model

Click here to download ENSAMXG00000020275's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020275	-	89	54.142	ENSG00000187790	FANCM	97	58.832	Homo_sapiens
ENSAMXG00000020275	-	67	54.289	ENSAMEG00000002114	FANCM	55	54.642	Ailuropoda_melanoleuca
ENSAMXG00000020275	-	95	50.820	ENSATEG00000012412	-	83	50.820	Anabas_testudineus
ENSAMXG00000020275	-	82	53.333	ENSANAG00000025075	FANCM	63	54.269	Aotus_nancymaae
ENSAMXG00000020275	-	97	45.224	ENSACLG00000016008	-	87	45.445	Astatotilapia_calliptera
ENSAMXG00000020275	-	65	54.642	ENSBTAG00000002612	FANCM	95	58.270	Bos_taurus
ENSAMXG00000020275	-	83	53.801	ENSCJAG00000015945	FANCM	70	54.737	Callithrix_jacchus
ENSAMXG00000020275	-	74	54.225	ENSCAFG00000014062	FANCM	62	54.225	Canis_familiaris
ENSAMXG00000020275	-	63	54.651	ENSCHIG00000015176	FANCM	52	54.651	Capra_hircus
ENSAMXG00000020275	-	76	53.154	ENSCPOG00000001446	FANCM	63	53.546	Cavia_porcellus
ENSAMXG00000020275	-	64	54.386	ENSCCAG00000026593	FANCM	70	54.386	Cebus_capucinus
ENSAMXG00000020275	-	75	53.900	ENSCATG00000031379	FANCM	63	53.900	Cercocebus_atys
ENSAMXG00000020275	-	91	53.730	ENSCSAG00000015308	FANCM	64	53.730	Chlorocebus_sabaeus
ENSAMXG00000020275	-	75	53.324	ENSCPBG00000015089	FANCM	75	52.804	Chrysemys_picta_bellii
ENSAMXG00000020275	-	88	53.846	ENSCANG00000029498	FANCM	75	53.846	Colobus_angolensis_palliatus
ENSAMXG00000020275	-	63	53.521	ENSCGRG00001023573	Fancm	52	53.521	Cricetulus_griseus_chok1gshd
ENSAMXG00000020275	-	87	48.242	ENSCVAG00000015579	-	81	48.570	Cyprinodon_variegatus
ENSAMXG00000020275	-	84	54.885	ENSDNOG00000007697	FANCM	74	55.047	Dasypus_novemcinctus
ENSAMXG00000020275	-	85	53.099	ENSDORG00000010095	Fancm	73	53.099	Dipodomys_ordii
ENSAMXG00000020275	-	67	54.599	ENSEASG00005007781	FANCM	98	57.682	Equus_asinus_asinus
ENSAMXG00000020275	-	78	54.717	ENSECAG00000018694	FANCM	58	55.071	Equus_caballus
ENSAMXG00000020275	-	72	54.286	ENSELUG00000015761	-	69	66.753	Esox_lucius
ENSAMXG00000020275	-	70	54.381	ENSFALG00000001703	FANCM	65	54.381	Ficedula_albicollis
ENSAMXG00000020275	-	72	54.376	ENSFDAG00000009043	FANCM	62	54.376	Fukomys_damarensis
ENSAMXG00000020275	-	92	45.983	ENSGMOG00000002019	-	81	46.334	Gadus_morhua
ENSAMXG00000020275	-	54	56.635	ENSGALG00000031182	FANCM	60	55.350	Gallus_gallus
ENSAMXG00000020275	-	91	45.012	ENSGACG00000009448	-	83	45.294	Gasterosteus_aculeatus
ENSAMXG00000020275	-	73	54.026	ENSGGOG00000008546	FANCM	62	53.900	Gorilla_gorilla
ENSAMXG00000020275	-	97	49.433	ENSHBUG00000007085	-	87	49.511	Haplochromis_burtoni
ENSAMXG00000020275	-	75	53.846	ENSHGLG00000013787	FANCM	65	54.079	Heterocephalus_glaber_female
ENSAMXG00000020275	-	75	53.846	ENSHGLG00100006377	FANCM	65	54.079	Heterocephalus_glaber_male
ENSAMXG00000020275	-	98	56.507	ENSIPUG00000014629	fancm	91	70.270	Ictalurus_punctatus
ENSAMXG00000020275	-	83	49.495	ENSLBEG00000004982	-	98	46.144	Labrus_bergylta
ENSAMXG00000020275	-	92	55.721	ENSLACG00000007739	FANCM	78	55.721	Latimeria_chalumnae
ENSAMXG00000020275	-	98	44.170	ENSLOCG00000011318	FANCM	89	44.532	Lepisosteus_oculatus
ENSAMXG00000020275	-	90	54.122	ENSLAFG00000001136	FANCM	78	53.900	Loxodonta_africana
ENSAMXG00000020275	-	90	53.613	ENSMFAG00000000383	FANCM	63	53.613	Macaca_fascicularis
ENSAMXG00000020275	-	90	53.613	ENSMMUG00000016513	FANCM	63	53.613	Macaca_mulatta
ENSAMXG00000020275	-	90	53.730	ENSMNEG00000038659	FANCM	76	53.730	Macaca_nemestrina
ENSAMXG00000020275	-	75	51.204	ENSMLEG00000035743	FANCM	61	46.635	Mandrillus_leucophaeus
ENSAMXG00000020275	-	97	45.166	ENSMAMG00000007087	-	87	45.646	Mastacembelus_armatus
ENSAMXG00000020275	-	97	44.892	ENSMZEG00005004644	-	87	44.952	Maylandia_zebra
ENSAMXG00000020275	-	75	49.482	ENSMAUG00000015450	Fancm	63	49.482	Mesocricetus_auratus
ENSAMXG00000020275	-	76	54.363	ENSMICG00000005811	FANCM	68	54.471	Microcebus_murinus
ENSAMXG00000020275	-	73	53.638	ENSMOCG00000008775	Fancm	62	54.343	Microtus_ochrogaster
ENSAMXG00000020275	-	80	49.868	ENSMMOG00000010215	-	84	47.222	Mola_mola
ENSAMXG00000020275	-	74	53.559	ENSMODG00000007334	FANCM	63	53.955	Monodelphis_domestica
ENSAMXG00000020275	-	72	52.824	MGP_CAROLIEiJ_G0017791	Fancm	60	52.650	Mus_caroli
ENSAMXG00000020275	-	72	52.128	ENSMUSG00000055884	Fancm	96	56.188	Mus_musculus
ENSAMXG00000020275	-	74	47.959	MGP_PahariEiJ_G0029547	Fancm	60	47.959	Mus_pahari
ENSAMXG00000020275	-	61	52.061	MGP_SPRETEiJ_G0018636	Fancm	60	51.826	Mus_spretus
ENSAMXG00000020275	-	74	52.928	ENSMPUG00000004849	FANCM	62	52.928	Mustela_putorius_furo
ENSAMXG00000020275	-	82	53.302	ENSMLUG00000006671	FANCM	70	53.302	Myotis_lucifugus
ENSAMXG00000020275	-	81	50.444	ENSNGAG00000017199	Fancm	69	50.444	Nannospalax_galili
ENSAMXG00000020275	-	87	53.900	ENSNLEG00000004432	FANCM	74	53.900	Nomascus_leucogenys
ENSAMXG00000020275	-	89	63.766	ENSONIG00000003531	-	78	63.766	Oreochromis_niloticus
ENSAMXG00000020275	-	77	56.111	ENSOANG00000013997	FANCM	73	56.250	Ornithorhynchus_anatinus
ENSAMXG00000020275	-	81	54.941	ENSOCUG00000007539	FANCM	70	54.941	Oryctolagus_cuniculus
ENSAMXG00000020275	-	92	45.795	ENSORLG00000014503	-	86	45.410	Oryzias_latipes
ENSAMXG00000020275	-	92	46.902	ENSORLG00020013516	-	86	45.700	Oryzias_latipes_hni
ENSAMXG00000020275	-	92	46.230	ENSORLG00015012100	-	86	45.725	Oryzias_latipes_hsok
ENSAMXG00000020275	-	96	47.731	ENSOMEG00000010717	-	87	47.171	Oryzias_melastigma
ENSAMXG00000020275	-	68	56.577	ENSOGAG00000003015	FANCM	61	53.918	Otolemur_garnettii
ENSAMXG00000020275	-	72	55.347	ENSOARG00000009429	FANCM	61	55.347	Ovis_aries
ENSAMXG00000020275	-	73	54.259	ENSPPAG00000028944	FANCM	62	54.133	Pan_paniscus
ENSAMXG00000020275	-	88	54.127	ENSPTRG00000006307	FANCM	75	54.000	Pan_troglodytes
ENSAMXG00000020275	-	90	53.846	ENSPANG00000023200	FANCM	76	53.846	Papio_anubis
ENSAMXG00000020275	-	72	51.639	ENSPEMG00000005619	Fancm	60	51.639	Peromyscus_maniculatus_bairdii
ENSAMXG00000020275	-	75	69.284	ENSPFOG00000002008	-	68	69.284	Poecilia_formosa
ENSAMXG00000020275	-	97	46.927	ENSPLAG00000014164	-	87	47.584	Poecilia_latipinna
ENSAMXG00000020275	-	97	46.927	ENSPMEG00000010746	-	87	46.903	Poecilia_mexicana
ENSAMXG00000020275	-	97	46.119	ENSPREG00000019849	-	87	45.960	Poecilia_reticulata
ENSAMXG00000020275	-	66	53.371	ENSPPYG00000005781	FANCM	63	53.371	Pongo_abelii
ENSAMXG00000020275	-	64	49.020	ENSPCAG00000011363	-	51	49.020	Procavia_capensis
ENSAMXG00000020275	-	98	57.904	ENSPNAG00000013558	-	88	57.734	Pygocentrus_nattereri
ENSAMXG00000020275	-	73	51.355	ENSRNOG00000056721	Fancm	76	51.355	Rattus_norvegicus
ENSAMXG00000020275	-	72	53.488	ENSRBIG00000011451	FANCM	60	53.488	Rhinopithecus_bieti
ENSAMXG00000020275	-	72	53.730	ENSRROG00000028917	FANCM	60	53.730	Rhinopithecus_roxellana
ENSAMXG00000020275	-	76	54.269	ENSSBOG00000030882	FANCM	64	54.269	Saimiri_boliviensis_boliviensis
ENSAMXG00000020275	-	74	52.123	ENSSHAG00000000507	FANCM	68	52.607	Sarcophilus_harrisii
ENSAMXG00000020275	-	97	44.716	ENSSMAG00000019903	-	99	63.462	Scophthalmus_maximus
ENSAMXG00000020275	-	81	45.922	ENSSDUG00000016682	-	92	74.874	Seriola_dumerili
ENSAMXG00000020275	-	97	50.865	ENSSLDG00000003408	-	88	44.842	Seriola_lalandi_dorsalis
ENSAMXG00000020275	-	76	55.006	ENSSSCG00000005000	FANCM	66	54.514	Sus_scrofa
ENSAMXG00000020275	-	97	44.966	ENSTNIG00000017277	-	88	45.510	Tetraodon_nigroviridis
ENSAMXG00000020275	-	77	53.396	ENSTTRG00000006669	FANCM	65	53.396	Tursiops_truncatus
ENSAMXG00000020275	-	74	54.225	ENSVVUG00000000357	FANCM	62	54.225	Vulpes_vulpes
ENSAMXG00000020275	-	98	46.880	ENSXMAG00000007702	-	87	46.764	Xiphophorus_maculatus