EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020362 (Gene tree)
Gene ID: 103039539
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 23547 bases
Position: chr4:24666338-24689884
Accession: 103039539
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020975	PAM2	PF07145.15	3.6e-05	1	1
ENSAMXP00000020975	LsmAD	PF06741.13	1.2e-18	1	1
ENSAMXP00000020975	SM-ATX	PF14438.6	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020975	-	3529	XM_022669372	ENSAMXP00000020975	1024 (aa)	XP_022525093	W5LMB3

Gene Model

Click here to download ENSAMXG00000020362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020362	-	89	58.824	ENSAMXG00000003332	atxn2l	96	65.574
ENSAMXG00000020362	-	64	49.684	ENSAMXG00000002342	atxn2	97	34.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020362	-	95	43.677	ENSG00000168488	ATXN2L	100	67.742	Homo_sapiens
ENSAMXG00000020362	-	50	55.598	ENSAPOG00000010103	atxn2l	99	54.406	Acanthochromis_polyacanthus
ENSAMXG00000020362	-	100	61.040	ENSAPOG00000021412	-	97	63.532	Acanthochromis_polyacanthus
ENSAMXG00000020362	-	94	43.366	ENSAMEG00000015502	ATXN2L	86	42.730	Ailuropoda_melanoleuca
ENSAMXG00000020362	-	81	56.684	ENSACIG00000024435	atxn2l	92	58.556	Amphilophus_citrinellus
ENSAMXG00000020362	-	77	66.667	ENSACIG00000014731	-	83	57.737	Amphilophus_citrinellus
ENSAMXG00000020362	-	50	56.333	ENSAOCG00000011378	atxn2l	99	54.748	Amphiprion_ocellaris
ENSAMXG00000020362	-	90	65.306	ENSAOCG00000002581	-	100	62.500	Amphiprion_ocellaris
ENSAMXG00000020362	-	100	60.603	ENSAPEG00000011038	-	99	63.594	Amphiprion_percula
ENSAMXG00000020362	-	50	56.439	ENSAPEG00000005810	atxn2l	99	54.995	Amphiprion_percula
ENSAMXG00000020362	-	78	51.712	ENSATEG00000017689	atxn2l	98	51.781	Anabas_testudineus
ENSAMXG00000020362	-	100	61.413	ENSATEG00000019382	-	97	63.852	Anabas_testudineus
ENSAMXG00000020362	-	95	43.241	ENSANAG00000026257	ATXN2L	96	41.346	Aotus_nancymaae
ENSAMXG00000020362	-	100	61.391	ENSACLG00000009975	-	97	62.865	Astatotilapia_calliptera
ENSAMXG00000020362	-	95	43.409	ENSCJAG00000006251	ATXN2L	89	42.830	Callithrix_jacchus
ENSAMXG00000020362	-	94	42.886	ENSCAFG00000017174	ATXN2L	88	43.056	Canis_familiaris
ENSAMXG00000020362	-	95	43.945	ENSCAFG00020017576	ATXN2L	89	43.665	Canis_lupus_dingo
ENSAMXG00000020362	-	95	41.229	ENSTSYG00000013854	ATXN2L	96	42.015	Carlito_syrichta
ENSAMXG00000020362	-	94	42.843	ENSCPOG00000010521	ATXN2L	99	41.693	Cavia_porcellus
ENSAMXG00000020362	-	85	49.301	ENSCCAG00000033928	ATXN2L	90	43.021	Cebus_capucinus
ENSAMXG00000020362	-	87	65.818	ENSCATG00000021354	ATXN2L	92	67.054	Cercocebus_atys
ENSAMXG00000020362	-	87	39.035	ENSCPBG00000003859	ATXN2L	87	40.466	Chrysemys_picta_bellii
ENSAMXG00000020362	-	95	40.591	ENSCANG00000043625	ATXN2L	99	40.077	Colobus_angolensis_palliatus
ENSAMXG00000020362	-	97	60.324	ENSCVAG00000015825	-	99	62.226	Cyprinodon_variegatus
ENSAMXG00000020362	-	99	59.357	ENSDARG00000011597	atxn2l	97	59.252	Danio_rerio
ENSAMXG00000020362	-	86	64.769	ENSEASG00005014992	ATXN2L	73	65.909	Equus_asinus_asinus
ENSAMXG00000020362	-	95	43.542	ENSECAG00000007301	ATXN2L	89	43.444	Equus_caballus
ENSAMXG00000020362	-	82	56.277	ENSEEUG00000008940	ATXN2L	86	57.009	Erinaceus_europaeus
ENSAMXG00000020362	-	87	59.872	ENSELUG00000022915	-	88	60.177	Esox_lucius
ENSAMXG00000020362	-	99	56.607	ENSELUG00000023740	atxn2l	99	57.449	Esox_lucius
ENSAMXG00000020362	-	95	42.651	ENSFCAG00000027807	ATXN2L	90	41.618	Felis_catus
ENSAMXG00000020362	-	98	39.924	ENSFDAG00000020667	ATXN2L	96	39.522	Fukomys_damarensis
ENSAMXG00000020362	-	65	54.611	ENSFHEG00000004491	-	84	56.466	Fundulus_heteroclitus
ENSAMXG00000020362	-	61	58.150	ENSGMOG00000006016	-	99	59.612	Gadus_morhua
ENSAMXG00000020362	-	71	58.209	ENSGMOG00000000316	atxn2l	82	60.448	Gadus_morhua
ENSAMXG00000020362	-	68	56.574	ENSGAFG00000019364	-	97	58.792	Gambusia_affinis
ENSAMXG00000020362	-	97	61.449	ENSGACG00000007446	-	99	62.126	Gasterosteus_aculeatus
ENSAMXG00000020362	-	95	41.923	ENSGAGG00000006078	ATXN2L	95	42.829	Gopherus_agassizii
ENSAMXG00000020362	-	95	42.913	ENSGGOG00000014112	ATXN2L	95	40.995	Gorilla_gorilla
ENSAMXG00000020362	-	81	40.000	ENSGGOG00000036669	-	66	56.048	Gorilla_gorilla
ENSAMXG00000020362	-	100	61.208	ENSHBUG00000007997	-	99	62.677	Haplochromis_burtoni
ENSAMXG00000020362	-	50	53.861	ENSHBUG00000013425	atxn2l	98	53.091	Haplochromis_burtoni
ENSAMXG00000020362	-	95	41.560	ENSHGLG00100000705	ATXN2L	99	39.922	Heterocephalus_glaber_male
ENSAMXG00000020362	-	99	60.370	ENSIPUG00000001761	atxn2l	97	61.143	Ictalurus_punctatus
ENSAMXG00000020362	-	85	48.521	ENSJJAG00000005629	Atxn2l	51	47.082	Jaculus_jaculus
ENSAMXG00000020362	-	98	61.027	ENSKMAG00000021450	-	99	62.330	Kryptolebias_marmoratus
ENSAMXG00000020362	-	100	58.834	ENSLBEG00000022720	-	97	61.706	Labrus_bergylta
ENSAMXG00000020362	-	95	42.984	ENSMFAG00000030590	ATXN2L	86	40.762	Macaca_fascicularis
ENSAMXG00000020362	-	95	42.984	ENSMNEG00000032716	ATXN2L	86	41.061	Macaca_nemestrina
ENSAMXG00000020362	-	95	42.984	ENSMLEG00000034087	ATXN2L	95	41.254	Mandrillus_leucophaeus
ENSAMXG00000020362	-	100	59.907	ENSMAMG00000013005	-	98	60.821	Mastacembelus_armatus
ENSAMXG00000020362	-	97	53.890	ENSMAMG00000017977	atxn2l	99	54.083	Mastacembelus_armatus
ENSAMXG00000020362	-	100	61.391	ENSMZEG00005013869	-	97	62.865	Maylandia_zebra
ENSAMXG00000020362	-	95	44.261	ENSMOCG00000020882	Atxn2l	93	42.999	Microtus_ochrogaster
ENSAMXG00000020362	-	86	65.707	ENSMMOG00000001440	-	99	60.246	Mola_mola
ENSAMXG00000020362	-	95	42.749	ENSMODG00000015570	ATXN2L	90	43.318	Monodelphis_domestica
ENSAMXG00000020362	-	81	67.448	ENSMALG00000008430	-	93	67.969	Monopterus_albus
ENSAMXG00000020362	-	95	44.132	MGP_CAROLIEiJ_G0030450	Atxn2l	76	71.429	Mus_caroli
ENSAMXG00000020362	-	95	43.992	ENSMUSG00000032637	Atxn2l	76	71.429	Mus_musculus
ENSAMXG00000020362	-	95	44.089	MGP_PahariEiJ_G0013660	Atxn2l	99	42.903	Mus_pahari
ENSAMXG00000020362	-	95	43.992	MGP_SPRETEiJ_G0031564	Atxn2l	76	71.429	Mus_spretus
ENSAMXG00000020362	-	94	42.772	ENSMLUG00000009877	ATXN2L	85	42.900	Myotis_lucifugus
ENSAMXG00000020362	-	78	48.171	ENSNBRG00000020833	-	98	48.540	Neolamprologus_brichardi
ENSAMXG00000020362	-	95	43.340	ENSNLEG00000011004	ATXN2L	94	41.683	Nomascus_leucogenys
ENSAMXG00000020362	-	59	51.406	ENSNLEG00000033414	-	64	51.406	Nomascus_leucogenys
ENSAMXG00000020362	-	81	62.376	ENSMEUG00000011098	ATXN2L	76	65.891	Notamacropus_eugenii
ENSAMXG00000020362	-	96	51.714	ENSONIG00000009388	atxn2l	98	52.493	Oreochromis_niloticus
ENSAMXG00000020362	-	97	62.124	ENSONIG00000011478	-	99	62.959	Oreochromis_niloticus
ENSAMXG00000020362	-	100	60.592	ENSORLG00000006059	-	97	61.349	Oryzias_latipes
ENSAMXG00000020362	-	100	60.685	ENSORLG00020000991	-	97	60.452	Oryzias_latipes_hni
ENSAMXG00000020362	-	100	60.685	ENSORLG00015014174	-	97	60.413	Oryzias_latipes_hsok
ENSAMXG00000020362	-	100	60.275	ENSOMEG00000021118	-	97	61.090	Oryzias_melastigma
ENSAMXG00000020362	-	98	42.197	ENSOGAG00000012596	ATXN2L	80	63.415	Otolemur_garnettii
ENSAMXG00000020362	-	94	43.517	ENSPPAG00000039107	ATXN2L	87	41.856	Pan_paniscus
ENSAMXG00000020362	-	81	56.471	ENSPPAG00000036236	-	96	56.452	Pan_paniscus
ENSAMXG00000020362	-	95	42.651	ENSPPRG00000013690	ATXN2L	90	41.618	Panthera_pardus
ENSAMXG00000020362	-	95	42.363	ENSPTIG00000015041	ATXN2L	92	41.353	Panthera_tigris_altaica
ENSAMXG00000020362	-	95	43.083	ENSPTRG00000007938	ATXN2L	95	41.018	Pan_troglodytes
ENSAMXG00000020362	-	95	43.042	ENSPANG00000018770	ATXN2L	90	42.404	Papio_anubis
ENSAMXG00000020362	-	94	42.018	ENSPSIG00000004866	ATXN2L	100	42.214	Pelodiscus_sinensis
ENSAMXG00000020362	-	78	64.789	ENSPMGG00000014821	-	96	64.146	Periophthalmus_magnuspinnatus
ENSAMXG00000020362	-	95	43.394	ENSPCIG00000025207	ATXN2L	90	43.186	Phascolarctos_cinereus
ENSAMXG00000020362	-	97	59.528	ENSPFOG00000005935	-	99	61.823	Poecilia_formosa
ENSAMXG00000020362	-	97	59.811	ENSPLAG00000017094	-	99	62.108	Poecilia_latipinna
ENSAMXG00000020362	-	97	59.528	ENSPMEG00000017227	-	99	61.823	Poecilia_mexicana
ENSAMXG00000020362	-	97	59.531	ENSPREG00000023090	-	99	62.167	Poecilia_reticulata
ENSAMXG00000020362	-	74	42.912	ENSPPYG00000017765	-	74	42.720	Pongo_abelii
ENSAMXG00000020362	-	95	42.983	ENSPCOG00000024791	ATXN2L	80	67.829	Propithecus_coquereli
ENSAMXG00000020362	-	94	39.370	ENSPVAG00000003958	ATXN2L	84	39.325	Pteropus_vampyrus
ENSAMXG00000020362	-	100	61.391	ENSPNYG00000017058	-	97	62.865	Pundamilia_nyererei
ENSAMXG00000020362	-	100	82.512	ENSPNAG00000023685	-	100	82.222	Pygocentrus_nattereri
ENSAMXG00000020362	-	99	59.610	ENSPNAG00000014538	atxn2l	99	60.886	Pygocentrus_nattereri
ENSAMXG00000020362	-	94	43.323	ENSRNOG00000018686	Atxn2l	74	67.829	Rattus_norvegicus
ENSAMXG00000020362	-	79	68.511	ENSRBIG00000036712	ATXN2L	83	69.643	Rhinopithecus_bieti
ENSAMXG00000020362	-	95	42.984	ENSRROG00000028547	ATXN2L	96	42.105	Rhinopithecus_roxellana
ENSAMXG00000020362	-	95	43.284	ENSSBOG00000025782	ATXN2L	96	41.239	Saimiri_boliviensis_boliviensis
ENSAMXG00000020362	-	95	41.935	ENSSHAG00000012015	ATXN2L	98	41.913	Sarcophilus_harrisii
ENSAMXG00000020362	-	99	56.981	ENSSFOG00015001018	atxn2l	99	56.475	Scleropages_formosus
ENSAMXG00000020362	-	53	60.477	ENSSMAG00000016932	-	97	61.668	Scophthalmus_maximus
ENSAMXG00000020362	-	78	55.336	ENSSMAG00000016365	atxn2l	96	52.915	Scophthalmus_maximus
ENSAMXG00000020362	-	50	52.908	ENSSDUG00000005833	atxn2l	99	54.971	Seriola_dumerili
ENSAMXG00000020362	-	97	63.697	ENSSDUG00000023014	-	99	63.722	Seriola_dumerili
ENSAMXG00000020362	-	82	75.954	ENSSLDG00000017701	-	97	75.954	Seriola_lalandi_dorsalis
ENSAMXG00000020362	-	96	53.301	ENSSPAG00000015698	atxn2l	98	55.000	Stegastes_partitus
ENSAMXG00000020362	-	100	60.714	ENSSPAG00000008174	-	97	63.396	Stegastes_partitus
ENSAMXG00000020362	-	100	60.073	ENSTRUG00000007132	-	97	61.524	Takifugu_rubripes
ENSAMXG00000020362	-	97	62.207	ENSTNIG00000018942	-	99	62.199	Tetraodon_nigroviridis
ENSAMXG00000020362	-	95	44.141	ENSUAMG00000001462	ATXN2L	89	44.055	Ursus_americanus
ENSAMXG00000020362	-	94	41.758	ENSUMAG00000009437	ATXN2L	89	67.442	Ursus_maritimus
ENSAMXG00000020362	-	94	43.418	ENSVVUG00000024239	ATXN2L	100	43.153	Vulpes_vulpes
ENSAMXG00000020362	-	99	39.341	ENSXETG00000014990	atxn2l	64	63.953	Xenopus_tropicalis
ENSAMXG00000020362	-	75	63.613	ENSXCOG00000001128	-	95	65.013	Xiphophorus_couchianus
ENSAMXG00000020362	-	97	59.585	ENSXMAG00000010133	-	99	62.239	Xiphophorus_maculatus