EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020379 (Gene tree)
Gene ID: 103030151
Gene Symbol: trmt11
Alias: zgc:56233
Full Name: tRNA methyltransferase 11 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 30753 bases
Position: chr10:18777744-18808496
Accession: 103030151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000020989	UPF0020	PF01170.18	6.3e-10	1	1
ENSAMXP00000020990	UPF0020	PF01170.18	7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000020990	-	3045	XM_007251815	ENSAMXP00000020990	469 (aa)	XP_007251877	W5LMC8
ENSAMXT00000020989	-	2296	-	ENSAMXP00000020989	449 (aa)	-	W5LMC7

Gene Model

Click here to download ENSAMXG00000020379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020379	trmt11	99	67.452	ENSG00000066651	TRMT11	100	68.657	Homo_sapiens
ENSAMXG00000020379	trmt11	98	77.174	ENSAPOG00000010741	trmt11	99	77.174	Acanthochromis_polyacanthus
ENSAMXG00000020379	trmt11	96	70.602	ENSAMEG00000009509	TRMT11	98	68.791	Ailuropoda_melanoleuca
ENSAMXG00000020379	trmt11	94	78.571	ENSACIG00000020205	trmt11	95	77.209	Amphilophus_citrinellus
ENSAMXG00000020379	trmt11	98	77.174	ENSAOCG00000020121	trmt11	99	77.174	Amphiprion_ocellaris
ENSAMXG00000020379	trmt11	98	77.609	ENSAPEG00000017412	trmt11	99	77.609	Amphiprion_percula
ENSAMXG00000020379	trmt11	99	76.674	ENSATEG00000024365	trmt11	99	76.674	Anabas_testudineus
ENSAMXG00000020379	trmt11	97	67.426	ENSAPLG00000002183	TRMT11	95	67.426	Anas_platyrhynchos
ENSAMXG00000020379	trmt11	97	64.465	ENSACAG00000002072	TRMT11	96	64.459	Anolis_carolinensis
ENSAMXG00000020379	trmt11	96	70.370	ENSANAG00000033565	TRMT11	98	69.079	Aotus_nancymaae
ENSAMXG00000020379	trmt11	98	77.391	ENSACLG00000019724	trmt11	99	77.391	Astatotilapia_calliptera
ENSAMXG00000020379	trmt11	92	69.492	ENSBTAG00000001957	TRMT11	97	70.488	Bos_taurus
ENSAMXG00000020379	trmt11	92	35.800	WBGene00022107	Y71F9AL.1	97	35.963	Caenorhabditis_elegans
ENSAMXG00000020379	trmt11	96	69.907	ENSCJAG00000003686	TRMT11	99	69.524	Callithrix_jacchus
ENSAMXG00000020379	trmt11	96	70.737	ENSCAFG00000001057	TRMT11	97	72.917	Canis_familiaris
ENSAMXG00000020379	trmt11	96	70.833	ENSCAFG00020021931	TRMT11	98	69.737	Canis_lupus_dingo
ENSAMXG00000020379	trmt11	96	70.139	ENSCHIG00000020274	TRMT11	97	69.507	Capra_hircus
ENSAMXG00000020379	trmt11	98	64.629	ENSTSYG00000004430	TRMT11	99	64.629	Carlito_syrichta
ENSAMXG00000020379	trmt11	96	67.981	ENSCAPG00000013532	TRMT11	95	67.431	Cavia_aperea
ENSAMXG00000020379	trmt11	96	70.370	ENSCPOG00000009124	TRMT11	98	69.079	Cavia_porcellus
ENSAMXG00000020379	trmt11	96	70.370	ENSCCAG00000018903	TRMT11	98	69.834	Cebus_capucinus
ENSAMXG00000020379	trmt11	99	67.382	ENSCATG00000039002	TRMT11	100	67.382	Cercocebus_atys
ENSAMXG00000020379	trmt11	97	69.248	ENSCLAG00000015746	TRMT11	100	68.035	Chinchilla_lanigera
ENSAMXG00000020379	trmt11	96	70.370	ENSCSAG00000016335	TRMT11	98	69.079	Chlorocebus_sabaeus
ENSAMXG00000020379	trmt11	97	67.198	ENSCPBG00000018528	TRMT11	95	67.257	Chrysemys_picta_bellii
ENSAMXG00000020379	trmt11	94	45.316	ENSCING00000017363	-	99	45.316	Ciona_intestinalis
ENSAMXG00000020379	trmt11	96	69.907	ENSCANG00000036944	TRMT11	98	69.565	Colobus_angolensis_palliatus
ENSAMXG00000020379	trmt11	96	69.907	ENSCGRG00001017153	Trmt11	97	69.283	Cricetulus_griseus_chok1gshd
ENSAMXG00000020379	trmt11	96	70.000	ENSCGRG00000008525	Trmt11	95	70.000	Cricetulus_griseus_crigri
ENSAMXG00000020379	trmt11	100	73.987	ENSCSEG00000009069	trmt11	99	73.987	Cynoglossus_semilaevis
ENSAMXG00000020379	trmt11	97	76.835	ENSCVAG00000020822	trmt11	98	76.652	Cyprinodon_variegatus
ENSAMXG00000020379	trmt11	99	83.726	ENSDARG00000040033	trmt11	99	84.737	Danio_rerio
ENSAMXG00000020379	trmt11	96	69.676	ENSDNOG00000002737	TRMT11	97	69.196	Dasypus_novemcinctus
ENSAMXG00000020379	trmt11	97	68.565	ENSDORG00000011192	Trmt11	98	67.991	Dipodomys_ordii
ENSAMXG00000020379	trmt11	98	40.674	FBgn0037250	CG1074	93	40.870	Drosophila_melanogaster
ENSAMXG00000020379	trmt11	68	66.812	ENSETEG00000007352	-	69	66.812	Echinops_telfairi
ENSAMXG00000020379	trmt11	96	60.044	ENSEBUG00000014368	trmt11	94	60.044	Eptatretus_burgeri
ENSAMXG00000020379	trmt11	96	70.139	ENSEASG00005009411	TRMT11	97	69.507	Equus_asinus_asinus
ENSAMXG00000020379	trmt11	96	70.370	ENSECAG00000017788	TRMT11	98	70.944	Equus_caballus
ENSAMXG00000020379	trmt11	69	58.929	ENSEEUG00000002249	-	71	55.686	Erinaceus_europaeus
ENSAMXG00000020379	trmt11	98	79.698	ENSELUG00000005252	trmt11	90	79.698	Esox_lucius
ENSAMXG00000020379	trmt11	96	70.602	ENSFCAG00000027670	TRMT11	98	69.298	Felis_catus
ENSAMXG00000020379	trmt11	97	67.426	ENSFALG00000011486	TRMT11	100	66.523	Ficedula_albicollis
ENSAMXG00000020379	trmt11	96	69.213	ENSFDAG00000006745	TRMT11	98	67.982	Fukomys_damarensis
ENSAMXG00000020379	trmt11	99	69.978	ENSFHEG00000003504	trmt11	99	69.978	Fundulus_heteroclitus
ENSAMXG00000020379	trmt11	97	74.342	ENSGMOG00000006618	trmt11	97	74.342	Gadus_morhua
ENSAMXG00000020379	trmt11	97	68.109	ENSGALG00000014831	TRMT11	99	67.102	Gallus_gallus
ENSAMXG00000020379	trmt11	98	75.870	ENSGAFG00000000144	trmt11	99	77.176	Gambusia_affinis
ENSAMXG00000020379	trmt11	98	76.739	ENSGACG00000006060	trmt11	99	76.739	Gasterosteus_aculeatus
ENSAMXG00000020379	trmt11	97	66.970	ENSGAGG00000005813	TRMT11	95	67.139	Gopherus_agassizii
ENSAMXG00000020379	trmt11	99	68.308	ENSGGOG00000017016	TRMT11	100	68.308	Gorilla_gorilla
ENSAMXG00000020379	trmt11	98	77.391	ENSHBUG00000012185	trmt11	99	77.391	Haplochromis_burtoni
ENSAMXG00000020379	trmt11	96	69.231	ENSHGLG00000014007	TRMT11	98	67.991	Heterocephalus_glaber_female
ENSAMXG00000020379	trmt11	96	69.231	ENSHGLG00100007509	TRMT11	98	67.991	Heterocephalus_glaber_male
ENSAMXG00000020379	trmt11	97	69.651	ENSHCOG00000019331	trmt11	93	69.651	Hippocampus_comes
ENSAMXG00000020379	trmt11	99	86.170	ENSIPUG00000017606	trmt11	100	86.170	Ictalurus_punctatus
ENSAMXG00000020379	trmt11	97	70.159	ENSSTOG00000006671	TRMT11	100	69.114	Ictidomys_tridecemlineatus
ENSAMXG00000020379	trmt11	97	69.704	ENSJJAG00000017244	-	99	68.640	Jaculus_jaculus
ENSAMXG00000020379	trmt11	99	74.082	ENSKMAG00000021188	trmt11	99	74.082	Kryptolebias_marmoratus
ENSAMXG00000020379	trmt11	98	76.139	ENSLBEG00000007644	trmt11	98	76.139	Labrus_bergylta
ENSAMXG00000020379	trmt11	97	71.586	ENSLACG00000010156	TRMT11	98	71.586	Latimeria_chalumnae
ENSAMXG00000020379	trmt11	99	77.155	ENSLOCG00000016519	trmt11	99	77.155	Lepisosteus_oculatus
ENSAMXG00000020379	trmt11	96	69.676	ENSLAFG00000003414	TRMT11	98	68.421	Loxodonta_africana
ENSAMXG00000020379	trmt11	99	67.382	ENSMFAG00000039916	TRMT11	100	67.382	Macaca_fascicularis
ENSAMXG00000020379	trmt11	96	70.139	ENSMMUG00000004293	TRMT11	98	68.860	Macaca_mulatta
ENSAMXG00000020379	trmt11	99	67.382	ENSMNEG00000040840	TRMT11	100	67.382	Macaca_nemestrina
ENSAMXG00000020379	trmt11	99	67.234	ENSMLEG00000007788	TRMT11	100	67.234	Mandrillus_leucophaeus
ENSAMXG00000020379	trmt11	98	76.522	ENSMAMG00000024066	trmt11	99	76.522	Mastacembelus_armatus
ENSAMXG00000020379	trmt11	98	77.391	ENSMZEG00005001961	trmt11	99	77.391	Maylandia_zebra
ENSAMXG00000020379	trmt11	97	68.493	ENSMGAG00000013262	TRMT11	96	68.254	Meleagris_gallopavo
ENSAMXG00000020379	trmt11	96	70.139	ENSMAUG00000018053	Trmt11	97	69.265	Mesocricetus_auratus
ENSAMXG00000020379	trmt11	96	70.602	ENSMICG00000029227	TRMT11	98	69.298	Microcebus_murinus
ENSAMXG00000020379	trmt11	96	70.139	ENSMOCG00000008176	Trmt11	97	69.042	Microtus_ochrogaster
ENSAMXG00000020379	trmt11	99	75.054	ENSMMOG00000007742	trmt11	99	75.054	Mola_mola
ENSAMXG00000020379	trmt11	96	68.981	ENSMODG00000017679	TRMT11	97	68.374	Monodelphis_domestica
ENSAMXG00000020379	trmt11	98	78.043	ENSMALG00000020514	trmt11	88	78.043	Monopterus_albus
ENSAMXG00000020379	trmt11	96	69.907	MGP_CAROLIEiJ_G0015212	Trmt11	97	68.820	Mus_caroli
ENSAMXG00000020379	trmt11	96	69.444	ENSMUSG00000019792	Trmt11	97	68.374	Mus_musculus
ENSAMXG00000020379	trmt11	96	69.213	MGP_PahariEiJ_G0023834	Trmt11	97	68.151	Mus_pahari
ENSAMXG00000020379	trmt11	96	62.500	MGP_SPRETEiJ_G0016021	Trmt11	94	69.737	Mus_spretus
ENSAMXG00000020379	trmt11	97	69.476	ENSMPUG00000014547	TRMT11	78	68.035	Mustela_putorius_furo
ENSAMXG00000020379	trmt11	98	68.707	ENSMLUG00000008157	TRMT11	99	68.707	Myotis_lucifugus
ENSAMXG00000020379	trmt11	88	71.537	ENSNGAG00000023826	Trmt11	96	70.290	Nannospalax_galili
ENSAMXG00000020379	trmt11	98	70.753	ENSNBRG00000010249	trmt11	99	70.753	Neolamprologus_brichardi
ENSAMXG00000020379	trmt11	99	67.880	ENSNLEG00000014080	TRMT11	100	67.880	Nomascus_leucogenys
ENSAMXG00000020379	trmt11	91	70.416	ENSMEUG00000008692	TRMT11	98	70.416	Notamacropus_eugenii
ENSAMXG00000020379	trmt11	96	69.444	ENSODEG00000005552	TRMT11	98	68.202	Octodon_degus
ENSAMXG00000020379	trmt11	98	77.826	ENSONIG00000007218	trmt11	99	77.826	Oreochromis_niloticus
ENSAMXG00000020379	trmt11	97	67.882	ENSOANG00000002151	TRMT11	99	66.449	Ornithorhynchus_anatinus
ENSAMXG00000020379	trmt11	98	70.091	ENSOCUG00000011783	TRMT11	99	69.048	Oryctolagus_cuniculus
ENSAMXG00000020379	trmt11	98	76.087	ENSORLG00000005779	trmt11	99	76.087	Oryzias_latipes
ENSAMXG00000020379	trmt11	98	76.087	ENSORLG00020019974	trmt11	99	76.087	Oryzias_latipes_hni
ENSAMXG00000020379	trmt11	98	75.870	ENSORLG00015004293	trmt11	99	75.870	Oryzias_latipes_hsok
ENSAMXG00000020379	trmt11	98	76.739	ENSOMEG00000016205	trmt11	97	76.739	Oryzias_melastigma
ENSAMXG00000020379	trmt11	96	70.602	ENSOGAG00000008764	TRMT11	98	69.298	Otolemur_garnettii
ENSAMXG00000020379	trmt11	96	70.139	ENSOARG00000007813	TRMT11	98	69.087	Ovis_aries
ENSAMXG00000020379	trmt11	96	69.816	ENSPPAG00000029635	TRMT11	98	68.777	Pan_paniscus
ENSAMXG00000020379	trmt11	96	70.602	ENSPPRG00000010751	TRMT11	98	69.298	Panthera_pardus
ENSAMXG00000020379	trmt11	96	70.602	ENSPTIG00000014927	TRMT11	98	69.298	Panthera_tigris_altaica
ENSAMXG00000020379	trmt11	96	70.046	ENSPTRG00000018577	TRMT11	98	68.996	Pan_troglodytes
ENSAMXG00000020379	trmt11	99	67.382	ENSPANG00000022840	TRMT11	100	67.382	Papio_anubis
ENSAMXG00000020379	trmt11	98	78.166	ENSPKIG00000012868	trmt11	98	78.166	Paramormyrops_kingsleyae
ENSAMXG00000020379	trmt11	97	66.819	ENSPSIG00000011395	TRMT11	97	66.741	Pelodiscus_sinensis
ENSAMXG00000020379	trmt11	96	69.907	ENSPEMG00000019414	-	97	68.820	Peromyscus_maniculatus_bairdii
ENSAMXG00000020379	trmt11	91	64.548	ENSPMAG00000007834	trmt11	99	64.548	Petromyzon_marinus
ENSAMXG00000020379	trmt11	88	69.543	ENSPCIG00000023970	TRMT11	93	69.898	Phascolarctos_cinereus
ENSAMXG00000020379	trmt11	98	76.522	ENSPFOG00000018545	trmt11	99	76.522	Poecilia_formosa
ENSAMXG00000020379	trmt11	98	76.087	ENSPLAG00000015864	trmt11	99	76.087	Poecilia_latipinna
ENSAMXG00000020379	trmt11	98	76.739	ENSPMEG00000003760	trmt11	99	76.739	Poecilia_mexicana
ENSAMXG00000020379	trmt11	98	77.174	ENSPREG00000012923	trmt11	99	77.174	Poecilia_reticulata
ENSAMXG00000020379	trmt11	99	68.308	ENSPPYG00000016990	TRMT11	100	68.308	Pongo_abelii
ENSAMXG00000020379	trmt11	96	69.676	ENSPCOG00000018890	TRMT11	98	68.640	Propithecus_coquereli
ENSAMXG00000020379	trmt11	98	77.609	ENSPNYG00000011467	trmt11	99	77.609	Pundamilia_nyererei
ENSAMXG00000020379	trmt11	99	87.393	ENSPNAG00000001816	trmt11	99	87.393	Pygocentrus_nattereri
ENSAMXG00000020379	trmt11	96	69.930	ENSRNOG00000014240	Trmt11	96	68.834	Rattus_norvegicus
ENSAMXG00000020379	trmt11	96	70.396	ENSRBIG00000029483	TRMT11	98	69.095	Rhinopithecus_bieti
ENSAMXG00000020379	trmt11	99	67.527	ENSRROG00000041258	TRMT11	100	67.527	Rhinopithecus_roxellana
ENSAMXG00000020379	trmt11	95	30.787	YOL124C	-	99	30.870	Saccharomyces_cerevisiae
ENSAMXG00000020379	trmt11	96	70.139	ENSSBOG00000026579	TRMT11	98	68.860	Saimiri_boliviensis_boliviensis
ENSAMXG00000020379	trmt11	91	69.927	ENSSHAG00000016956	TRMT11	98	71.100	Sarcophilus_harrisii
ENSAMXG00000020379	trmt11	99	75.536	ENSSFOG00015009471	trmt11	99	75.536	Scleropages_formosus
ENSAMXG00000020379	trmt11	98	75.435	ENSSMAG00000006405	trmt11	99	75.435	Scophthalmus_maximus
ENSAMXG00000020379	trmt11	97	77.982	ENSSDUG00000012463	trmt11	91	76.957	Seriola_dumerili
ENSAMXG00000020379	trmt11	97	77.752	ENSSLDG00000014435	trmt11	99	76.739	Seriola_lalandi_dorsalis
ENSAMXG00000020379	trmt11	97	65.132	ENSSPUG00000003588	TRMT11	98	65.132	Sphenodon_punctatus
ENSAMXG00000020379	trmt11	98	77.174	ENSSPAG00000021676	trmt11	100	73.522	Stegastes_partitus
ENSAMXG00000020379	trmt11	92	70.944	ENSSSCG00000004220	TRMT11	87	69.767	Sus_scrofa
ENSAMXG00000020379	trmt11	97	66.970	ENSTGUG00000011774	TRMT11	98	66.740	Taeniopygia_guttata
ENSAMXG00000020379	trmt11	99	73.820	ENSTRUG00000004275	trmt11	99	73.820	Takifugu_rubripes
ENSAMXG00000020379	trmt11	99	73.820	ENSTNIG00000019098	trmt11	99	73.820	Tetraodon_nigroviridis
ENSAMXG00000020379	trmt11	91	69.608	ENSTTRG00000015658	TRMT11	88	69.608	Tursiops_truncatus
ENSAMXG00000020379	trmt11	80	70.670	ENSUAMG00000008507	TRMT11	92	68.848	Ursus_americanus
ENSAMXG00000020379	trmt11	96	70.930	ENSUMAG00000001192	TRMT11	98	69.298	Ursus_maritimus
ENSAMXG00000020379	trmt11	91	71.324	ENSVPAG00000010506	TRMT11	98	71.324	Vicugna_pacos
ENSAMXG00000020379	trmt11	96	70.833	ENSVVUG00000000810	TRMT11	99	70.093	Vulpes_vulpes
ENSAMXG00000020379	trmt11	97	66.593	ENSXETG00000011700	trmt11	95	66.593	Xenopus_tropicalis
ENSAMXG00000020379	trmt11	98	70.000	ENSXCOG00000016281	trmt11	99	70.000	Xiphophorus_couchianus
ENSAMXG00000020379	trmt11	98	76.087	ENSXMAG00000008688	trmt11	99	76.087	Xiphophorus_maculatus