EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000020388 (Gene tree)
Gene ID
103030992
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
219831 bases
Position
chr10:18924242-19144072
Accession
103030992
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000036117RRM_1PF00076.228.6e-3212
ENSAMXP00000036117RRM_1PF00076.228.6e-3222
ENSAMXP00000052988RRM_1PF00076.221.8e-3112
ENSAMXP00000052988RRM_1PF00076.221.8e-3122
ENSAMXP00000020995RRM_1PF00076.222e-3112
ENSAMXP00000020995RRM_1PF00076.222e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000036439-4679-ENSAMXP00000036117290 (aa)--
ENSAMXT00000048568-1203-ENSAMXP00000052988400 (aa)--
ENSAMXT00000020995-1254XM_007251817ENSAMXP00000020995417 (aa)XP_007251879W5LMD3
Gene Model
Click here to download ENSAMXG00000020388's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020388's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000020388rbms35435.849ENSAMXG00000031223elavl1a6736.047
ENSAMXG00000020388rbms37088.614ENSAMXG00000043770-10084.496
ENSAMXG00000020388rbms37869.301ENSAMXG00000002146rbms1a8867.857
ENSAMXG00000020388rbms37838.776ENSAMXG00000007935celf46838.776
ENSAMXG00000020388rbms37835.000ENSAMXG00000012028celf5b5635.000
ENSAMXG00000020388rbms39566.015ENSAMXG00000009969RBMS19864.846
ENSAMXG00000020388rbms35835.912ENSAMXG00000000687elavl46236.313
ENSAMXG00000020388rbms38471.186ENSAMXG00000024719rbms2a8273.394
ENSAMXG00000020388rbms35937.640ENSAMXG00000036990ELAVL25938.506
ENSAMXG00000020388rbms35237.079ENSAMXG00000020576celf15138.333
ENSAMXG00000020388rbms35335.294ENSAMXG00000006391elavl1b8535.294
ENSAMXG00000020388rbms38870.889ENSAMXG00000017399rbms2b8570.889
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000020388rbms310086.525ENSG00000144642RBMS310086.742Homo_sapiens
ENSAMXG00000020388rbms39990.338ENSAPOG00000003432-9990.338Acanthochromis_polyacanthus
ENSAMXG00000020388rbms310077.826ENSAPOG00000007266rbms39682.161Acanthochromis_polyacanthus
ENSAMXG00000020388rbms36981.373ENSAMEG00000005947RBMS310081.373Ailuropoda_melanoleuca
ENSAMXG00000020388rbms37392.409ENSACIG00000006987-8193.243Amphilophus_citrinellus
ENSAMXG00000020388rbms38876.152ENSACIG00000021113RBMS39676.423Amphilophus_citrinellus
ENSAMXG00000020388rbms39983.834ENSAOCG00000024104-9983.834Amphiprion_ocellaris
ENSAMXG00000020388rbms310083.683ENSAOCG00000021274rbms310081.119Amphiprion_ocellaris
ENSAMXG00000020388rbms39983.784ENSAPEG00000009481-9983.784Amphiprion_percula
ENSAMXG00000020388rbms38284.659ENSAPEG00000016299rbms38689.264Amphiprion_percula
ENSAMXG00000020388rbms39990.097ENSATEG00000008433-9990.097Anabas_testudineus
ENSAMXG00000020388rbms310084.309ENSATEG00000024295rbms310082.201Anabas_testudineus
ENSAMXG00000020388rbms39984.259ENSAPLG00000012270RBMS39983.565Anas_platyrhynchos
ENSAMXG00000020388rbms310086.256ENSACAG00000028664RBMS39985.071Anolis_carolinensis
ENSAMXG00000020388rbms310083.945ENSANAG00000021899RBMS310082.569Aotus_nancymaae
ENSAMXG00000020388rbms39983.066ENSACLG00000008976-9483.066Astatotilapia_calliptera
ENSAMXG00000020388rbms310083.803ENSACLG00000018506rbms310084.038Astatotilapia_calliptera
ENSAMXG00000020388rbms310085.816ENSBTAG00000044062RBMS310084.161Bos_taurus
ENSAMXG00000020388rbms310083.945ENSCJAG00000004312RBMS310082.339Callithrix_jacchus
ENSAMXG00000020388rbms310083.371ENSCAFG00000005464RBMS39982.005Canis_familiaris
ENSAMXG00000020388rbms310083.371ENSCAFG00020024980RBMS310082.005Canis_lupus_dingo
ENSAMXG00000020388rbms310086.288ENSCHIG00000009144RBMS39984.634Capra_hircus
ENSAMXG00000020388rbms37683.183ENSTSYG00000002615RBMS310083.183Carlito_syrichta
ENSAMXG00000020388rbms38882.192ENSCAPG00000017783RBMS39381.967Cavia_aperea
ENSAMXG00000020388rbms310087.081ENSCPOG00000006457RBMS39987.081Cavia_porcellus
ENSAMXG00000020388rbms310083.945ENSCCAG00000008671RBMS310082.339Cebus_capucinus
ENSAMXG00000020388rbms39984.028ENSCATG00000013222RBMS39982.407Cercocebus_atys
ENSAMXG00000020388rbms310086.052ENSCLAG00000005866RBMS39984.634Chinchilla_lanigera
ENSAMXG00000020388rbms36584.615ENSCSAG00000009655RBMS39984.615Chlorocebus_sabaeus
ENSAMXG00000020388rbms38788.000ENSCHOG00000000758RBMS38688.000Choloepus_hoffmanni
ENSAMXG00000020388rbms310086.967ENSCPBG00000022678RBMS39888.391Chrysemys_picta_bellii
ENSAMXG00000020388rbms310083.716ENSCANG00000032137RBMS310082.110Colobus_angolensis_palliatus
ENSAMXG00000020388rbms310085.167ENSCGRG00001007243Rbms39985.167Cricetulus_griseus_chok1gshd
ENSAMXG00000020388rbms310085.167ENSCGRG00000004599Rbms39985.167Cricetulus_griseus_crigri
ENSAMXG00000020388rbms310083.645ENSCSEG00000010011RBMS310081.075Cynoglossus_semilaevis
ENSAMXG00000020388rbms310089.928ENSCSEG00000014677-9493.827Cynoglossus_semilaevis
ENSAMXG00000020388rbms310084.397ENSCVAG00000022354rbms310082.506Cyprinodon_variegatus
ENSAMXG00000020388rbms39987.952ENSCVAG00000022814-9989.880Cyprinodon_variegatus
ENSAMXG00000020388rbms310095.444ENSDARG00000044574rbms310098.611Danio_rerio
ENSAMXG00000020388rbms310085.714ENSDNOG00000016645RBMS310083.990Dasypus_novemcinctus
ENSAMXG00000020388rbms310085.106ENSDORG00000007220Rbms39983.688Dipodomys_ordii
ENSAMXG00000020388rbms38683.333ENSETEG00000009485-8069.143Echinops_telfairi
ENSAMXG00000020388rbms35474.359ENSEBUG00000005830rbms38455.985Eptatretus_burgeri
ENSAMXG00000020388rbms310086.052ENSEASG00005006152RBMS39984.397Equus_asinus_asinus
ENSAMXG00000020388rbms310086.052ENSECAG00000017871RBMS39984.397Equus_caballus
ENSAMXG00000020388rbms39078.030ENSEEUG00000014337RBMS310076.263Erinaceus_europaeus
ENSAMXG00000020388rbms39092.781ENSELUG00000006905-9894.239Esox_lucius
ENSAMXG00000020388rbms310082.160ENSELUG00000002862rbms310082.160Esox_lucius
ENSAMXG00000020388rbms310086.288ENSFCAG00000002130RBMS39984.870Felis_catus
ENSAMXG00000020388rbms310086.730ENSFALG00000009165RBMS39985.545Ficedula_albicollis
ENSAMXG00000020388rbms310086.761ENSFDAG00000008278RBMS39985.343Fukomys_damarensis
ENSAMXG00000020388rbms39275.000ENSFHEG00000004787RBMS39577.027Fundulus_heteroclitus
ENSAMXG00000020388rbms38983.586ENSGMOG00000002600-9484.062Gadus_morhua
ENSAMXG00000020388rbms310086.730ENSGALG00000011439RBMS39985.545Gallus_gallus
ENSAMXG00000020388rbms310084.434ENSGAFG00000000168rbms310082.311Gambusia_affinis
ENSAMXG00000020388rbms39990.602ENSGAFG00000003329-9990.602Gambusia_affinis
ENSAMXG00000020388rbms36584.672ENSGAGG00000004039RBMS310084.672Gopherus_agassizii
ENSAMXG00000020388rbms310083.945ENSGGOG00000007228RBMS310082.339Gorilla_gorilla
ENSAMXG00000020388rbms310086.636ENSHBUG00000019785-9686.636Haplochromis_burtoni
ENSAMXG00000020388rbms37188.732ENSHBUG00000021196rbms39484.015Haplochromis_burtoni
ENSAMXG00000020388rbms310086.052ENSHGLG00000002170RBMS39984.634Heterocephalus_glaber_female
ENSAMXG00000020388rbms310086.052ENSHGLG00100014278RBMS39984.634Heterocephalus_glaber_male
ENSAMXG00000020388rbms39989.157ENSHCOG00000007894-9989.157Hippocampus_comes
ENSAMXG00000020388rbms310097.362ENSIPUG00000017680rbms310097.362Ictalurus_punctatus
ENSAMXG00000020388rbms310086.288ENSSTOG00000006324RBMS39984.870Ictidomys_tridecemlineatus
ENSAMXG00000020388rbms310082.506ENSJJAG00000014708Rbms39981.324Jaculus_jaculus
ENSAMXG00000020388rbms39989.614ENSKMAG00000012586-9989.614Kryptolebias_marmoratus
ENSAMXG00000020388rbms310082.599ENSKMAG00000020500rbms310080.046Kryptolebias_marmoratus
ENSAMXG00000020388rbms39990.799ENSLBEG00000027388-9990.799Labrus_bergylta
ENSAMXG00000020388rbms35977.992ENSLBEG00000006677rbms39677.992Labrus_bergylta
ENSAMXG00000020388rbms310088.361ENSLACG00000010581RBMS310086.461Latimeria_chalumnae
ENSAMXG00000020388rbms37088.356ENSLOCG00000002328rbms310088.356Lepisosteus_oculatus
ENSAMXG00000020388rbms310083.599ENSLAFG00000000354RBMS310082.232Loxodonta_africana
ENSAMXG00000020388rbms310086.288ENSMFAG00000033300RBMS39984.634Macaca_fascicularis
ENSAMXG00000020388rbms310086.288ENSMMUG00000004404RBMS39984.634Macaca_mulatta
ENSAMXG00000020388rbms310083.716ENSMNEG00000035839RBMS310082.110Macaca_nemestrina
ENSAMXG00000020388rbms39984.028ENSMLEG00000029464RBMS39982.407Mandrillus_leucophaeus
ENSAMXG00000020388rbms39092.246ENSMAMG00000002176-8392.246Mastacembelus_armatus
ENSAMXG00000020388rbms310084.112ENSMAMG00000024043rbms310082.009Mastacembelus_armatus
ENSAMXG00000020388rbms310083.803ENSMZEG00005006308rbms310084.038Maylandia_zebra
ENSAMXG00000020388rbms310087.850ENSMZEG00005026469-9687.850Maylandia_zebra
ENSAMXG00000020388rbms310085.167ENSMAUG00000016436Rbms39985.167Mesocricetus_auratus
ENSAMXG00000020388rbms310083.945ENSMICG00000049249RBMS310082.339Microcebus_murinus
ENSAMXG00000020388rbms310083.014ENSMOCG00000006997Rbms39984.211Microtus_ochrogaster
ENSAMXG00000020388rbms38285.714ENSMMOG00000008471RBMS38890.184Mola_mola
ENSAMXG00000020388rbms39988.406ENSMMOG00000015071-9988.406Mola_mola
ENSAMXG00000020388rbms310078.049ENSMODG00000015125RBMS39977.728Monodelphis_domestica
ENSAMXG00000020388rbms39989.855ENSMALG00000009155-9989.855Monopterus_albus
ENSAMXG00000020388rbms310084.112ENSMALG00000019536RBMS310081.542Monopterus_albus
ENSAMXG00000020388rbms310083.732MGP_CAROLIEiJ_G0032783Rbms310089.855Mus_caroli
ENSAMXG00000020388rbms310084.450ENSMUSG00000039607Rbms310091.304Mus_musculus
ENSAMXG00000020388rbms310084.248MGP_PahariEiJ_G0015650Rbms310091.304Mus_pahari
ENSAMXG00000020388rbms310084.450MGP_SPRETEiJ_G0033930Rbms310091.304Mus_spretus
ENSAMXG00000020388rbms310083.144ENSMPUG00000011956RBMS310081.777Mustela_putorius_furo
ENSAMXG00000020388rbms310086.288ENSMLUG00000000659RBMS310084.870Myotis_lucifugus
ENSAMXG00000020388rbms310086.603ENSNGAG00000014039Rbms39986.603Nannospalax_galili
ENSAMXG00000020388rbms39990.580ENSNBRG00000018065-9990.580Neolamprologus_brichardi
ENSAMXG00000020388rbms310083.945ENSNLEG00000004129RBMS310082.339Nomascus_leucogenys
ENSAMXG00000020388rbms39976.659ENSMEUG00000004772RBMS39974.600Notamacropus_eugenii
ENSAMXG00000020388rbms39983.603ENSOPRG00000006808RBMS38581.986Ochotona_princeps
ENSAMXG00000020388rbms310086.052ENSODEG00000003651RBMS39984.634Octodon_degus
ENSAMXG00000020388rbms310081.818ENSONIG00000007172rbms310079.853Oreochromis_niloticus
ENSAMXG00000020388rbms310083.827ENSOANG00000010529RBMS39982.232Ornithorhynchus_anatinus
ENSAMXG00000020388rbms310082.916ENSOCUG00000004840RBMS39981.321Oryctolagus_cuniculus
ENSAMXG00000020388rbms310082.547ENSORLG00000005370RBMS310080.189Oryzias_latipes
ENSAMXG00000020388rbms39989.614ENSORLG00000002306-9989.614Oryzias_latipes
ENSAMXG00000020388rbms39989.855ENSORLG00020008496-9989.855Oryzias_latipes_hni
ENSAMXG00000020388rbms310082.311ENSORLG00020022674RBMS310079.953Oryzias_latipes_hni
ENSAMXG00000020388rbms39989.855ENSORLG00015015719-9989.855Oryzias_latipes_hsok
ENSAMXG00000020388rbms310083.019ENSORLG00015005509rbms310080.425Oryzias_latipes_hsok
ENSAMXG00000020388rbms39189.211ENSOMEG00000007677-9689.617Oryzias_melastigma
ENSAMXG00000020388rbms310083.255ENSOMEG00000014805RBMS310080.896Oryzias_melastigma
ENSAMXG00000020388rbms310082.688ENSOARG00000014684RBMS39981.093Ovis_aries
ENSAMXG00000020388rbms310083.945ENSPPAG00000036519RBMS310082.339Pan_paniscus
ENSAMXG00000020388rbms310083.486ENSPPRG00000002761RBMS310082.110Panthera_pardus
ENSAMXG00000020388rbms310086.052ENSPTIG00000011568RBMS310084.634Panthera_tigris_altaica
ENSAMXG00000020388rbms310086.525ENSPTRG00000014709RBMS39984.870Pan_troglodytes
ENSAMXG00000020388rbms39984.028ENSPANG00000010234RBMS39982.407Papio_anubis
ENSAMXG00000020388rbms37392.019ENSPKIG00000007989-10090.698Paramormyrops_kingsleyae
ENSAMXG00000020388rbms37394.811ENSPKIG00000016025-7594.811Paramormyrops_kingsleyae
ENSAMXG00000020388rbms310086.256ENSPSIG00000005269RBMS39985.071Pelodiscus_sinensis
ENSAMXG00000020388rbms39190.000ENSPMGG00000021683-9690.437Periophthalmus_magnuspinnatus
ENSAMXG00000020388rbms38284.770ENSPMGG00000021544rbms38588.344Periophthalmus_magnuspinnatus
ENSAMXG00000020388rbms39982.850ENSPEMG00000001117Rbms39982.850Peromyscus_maniculatus_bairdii
ENSAMXG00000020388rbms38289.521ENSPCIG00000006106RBMS39085.253Phascolarctos_cinereus
ENSAMXG00000020388rbms310084.670ENSPFOG00000017887rbms310082.547Poecilia_formosa
ENSAMXG00000020388rbms37783.333ENSPLAG00000016866-8383.333Poecilia_latipinna
ENSAMXG00000020388rbms39990.120ENSPMEG00000002993-9990.120Poecilia_mexicana
ENSAMXG00000020388rbms38989.840ENSPREG00000018221-9791.270Poecilia_reticulata
ENSAMXG00000020388rbms39983.810ENSPREG00000011880rbms39983.095Poecilia_reticulata
ENSAMXG00000020388rbms310071.071ENSPPYG00000014050RBMS38269.476Pongo_abelii
ENSAMXG00000020388rbms310064.237ENSPCAG00000006307RBMS39962.870Procavia_capensis
ENSAMXG00000020388rbms310084.174ENSPCOG00000017136RBMS310082.569Propithecus_coquereli
ENSAMXG00000020388rbms310073.804ENSPVAG00000014037RBMS39973.804Pteropus_vampyrus
ENSAMXG00000020388rbms39990.580ENSPNYG00000012624-9990.580Pundamilia_nyererei
ENSAMXG00000020388rbms310083.568ENSPNYG00000010546rbms310083.803Pundamilia_nyererei
ENSAMXG00000020388rbms310098.082ENSPNAG00000001800rbms310098.082Pygocentrus_nattereri
ENSAMXG00000020388rbms36587.234ENSPNAG00000026763-7390.854Pygocentrus_nattereri
ENSAMXG00000020388rbms310084.689ENSRNOG00000025881Rbms310084.689Rattus_norvegicus
ENSAMXG00000020388rbms310083.486ENSRBIG00000035863RBMS310081.881Rhinopithecus_bieti
ENSAMXG00000020388rbms38884.555ENSRROG00000027512RBMS39384.334Rhinopithecus_roxellana
ENSAMXG00000020388rbms310083.945ENSSBOG00000020232RBMS310082.339Saimiri_boliviensis_boliviensis
ENSAMXG00000020388rbms38881.301ENSSHAG00000002411RBMS39481.081Sarcophilus_harrisii
ENSAMXG00000020388rbms39989.130ENSSFOG00015008578rbms39989.130Scleropages_formosus
ENSAMXG00000020388rbms39092.781ENSSMAG00000020065-9392.781Scophthalmus_maximus
ENSAMXG00000020388rbms310081.352ENSSMAG00000004997rbms39985.637Scophthalmus_maximus
ENSAMXG00000020388rbms310084.112ENSSDUG00000013656RBMS310084.346Seriola_dumerili
ENSAMXG00000020388rbms39990.338ENSSDUG00000019287-9990.338Seriola_dumerili
ENSAMXG00000020388rbms39990.338ENSSLDG00000013224-9990.338Seriola_lalandi_dorsalis
ENSAMXG00000020388rbms310083.759ENSSLDG00000020276RBMS310081.439Seriola_lalandi_dorsalis
ENSAMXG00000020388rbms37873.392ENSSARG00000000695RBMS39273.178Sorex_araneus
ENSAMXG00000020388rbms37182.000ENSSPUG00000017197RBMS39882.000Sphenodon_punctatus
ENSAMXG00000020388rbms310083.683ENSSPAG00000020693rbms310083.916Stegastes_partitus
ENSAMXG00000020388rbms39986.058ENSSPAG00000003983-9986.058Stegastes_partitus
ENSAMXG00000020388rbms310086.052ENSSSCG00000036381RBMS39984.397Sus_scrofa
ENSAMXG00000020388rbms37782.143ENSTGUG00000003572RBMS310082.143Taeniopygia_guttata
ENSAMXG00000020388rbms310082.477ENSTRUG00000021719RBMS310079.907Takifugu_rubripes
ENSAMXG00000020388rbms39979.952ENSTRUG00000007482-9979.567Takifugu_rubripes
ENSAMXG00000020388rbms37886.550ENSTBEG00000005362RBMS39286.297Tupaia_belangeri
ENSAMXG00000020388rbms39983.028ENSTTRG00000006202RBMS39981.422Tursiops_truncatus
ENSAMXG00000020388rbms310083.371ENSUMAG00000000263RBMS39982.005Ursus_maritimus
ENSAMXG00000020388rbms38874.026ENSVPAG00000003842RBMS39373.834Vicugna_pacos
ENSAMXG00000020388rbms38884.416ENSVVUG00000004660RBMS39192.417Vulpes_vulpes
ENSAMXG00000020388rbms37080.323ENSXETG00000032055RBMS39980.323Xenopus_tropicalis
ENSAMXG00000020388rbms39174.935ENSXCOG00000019600-9575.000Xiphophorus_couchianus
ENSAMXG00000020388rbms310082.824ENSXMAG00000021783rbms310082.118Xiphophorus_maculatus
ENSAMXG00000020388rbms39990.361ENSXMAG00000014382-9990.361Xiphophorus_maculatus

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