EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020576 (Gene tree)
Gene ID: 103032549
Gene Symbol: celf1
Alias: Bruno-like|brul|cb920|cugbp1
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 33507 bases
Position: chrAPWO02000034.1:1086435-1119941
Accession: 103032549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000051061	RRM_1	PF00076.22	4e-50	1	3
ENSAMXP00000051061	RRM_1	PF00076.22	4e-50	2	3
ENSAMXP00000051061	RRM_1	PF00076.22	4e-50	3	3
ENSAMXP00000035958	RRM_1	PF00076.22	6e-50	1	3
ENSAMXP00000035958	RRM_1	PF00076.22	6e-50	2	3
ENSAMXP00000035958	RRM_1	PF00076.22	6e-50	3	3
ENSAMXP00000021189	RRM_1	PF00076.22	1.3e-39	1	3
ENSAMXP00000021189	RRM_1	PF00076.22	1.3e-39	2	3
ENSAMXP00000021189	RRM_1	PF00076.22	1.3e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000051464	-	3595	XM_007244882	ENSAMXP00000051061	530 (aa)	XP_007244944	UPI000440DCF7
ENSAMXT00000038078	-	3690	-	ENSAMXP00000035958	581 (aa)	-	-
ENSAMXT00000021189	-	1440	-	ENSAMXP00000021189	479 (aa)	-	W5LMX7

Gene Model

Click here to download ENSAMXG00000020576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020576	celf1	52	38.372	ENSAMXG00000018779	pabpc4	56	37.500
ENSAMXG00000020576	celf1	90	43.864	ENSAMXG00000033823	si:dkey-205h23.2	53	65.625
ENSAMXG00000020576	celf1	61	80.952	ENSAMXG00000007935	celf4	93	45.951
ENSAMXG00000020576	celf1	53	45.679	ENSAMXG00000031223	elavl1a	77	45.679
ENSAMXG00000020576	celf1	52	30.252	ENSAMXG00000037884	tia1l	76	30.769
ENSAMXG00000020576	celf1	60	33.333	ENSAMXG00000000687	elavl4	77	33.333
ENSAMXG00000020576	celf1	91	44.378	ENSAMXG00000012028	celf5b	56	59.854
ENSAMXG00000020576	celf1	61	44.444	ENSAMXG00000006391	elavl1b	77	44.444
ENSAMXG00000020576	celf1	90	40.000	ENSAMXG00000009926	celf3a	65	60.294
ENSAMXG00000020576	celf1	54	42.553	ENSAMXG00000040498	elavl3	78	42.553
ENSAMXG00000020576	celf1	51	38.333	ENSAMXG00000020388	rbms3	52	37.079
ENSAMXG00000020576	celf1	95	73.674	ENSAMXG00000005933	celf2	100	68.119
ENSAMXG00000020576	celf1	53	36.047	ENSAMXG00000008599	pabpc1b	53	36.047
ENSAMXG00000020576	celf1	90	43.204	ENSAMXG00000012489	celf3b	64	64.885
ENSAMXG00000020576	celf1	50	40.741	ENSAMXG00000036990	ELAVL2	65	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020576	celf1	96	81.071	ENSG00000149187	CELF1	100	89.474	Homo_sapiens
ENSAMXG00000020576	celf1	93	90.619	ENSAPOG00000024000	celf1	100	90.818	Acanthochromis_polyacanthus
ENSAMXG00000020576	celf1	96	81.644	ENSAMEG00000007596	CELF1	98	80.497	Ailuropoda_melanoleuca
ENSAMXG00000020576	celf1	92	89.318	ENSACIG00000023843	celf1	100	87.602	Amphilophus_citrinellus
ENSAMXG00000020576	celf1	93	90.619	ENSAOCG00000001252	celf1	100	90.818	Amphiprion_ocellaris
ENSAMXG00000020576	celf1	93	90.855	ENSAPEG00000002340	celf1	97	91.054	Amphiprion_percula
ENSAMXG00000020576	celf1	92	89.066	ENSATEG00000010871	celf1	100	84.959	Anabas_testudineus
ENSAMXG00000020576	celf1	96	82.726	ENSACAG00000002114	CELF1	98	81.190	Anolis_carolinensis
ENSAMXG00000020576	celf1	95	82.296	ENSANAG00000031770	CELF1	98	80.153	Aotus_nancymaae
ENSAMXG00000020576	celf1	100	84.815	ENSACLG00000010181	-	100	85.425	Astatotilapia_calliptera
ENSAMXG00000020576	celf1	96	81.262	ENSBTAG00000002520	CELF1	100	82.341	Bos_taurus
ENSAMXG00000020576	celf1	96	80.880	ENSCJAG00000020133	CELF1	98	81.262	Callithrix_jacchus
ENSAMXG00000020576	celf1	96	81.453	ENSCAFG00000008452	CELF1	98	80.306	Canis_familiaris
ENSAMXG00000020576	celf1	96	81.453	ENSCAFG00020025487	CELF1	100	80.079	Canis_lupus_dingo
ENSAMXG00000020576	celf1	96	81.644	ENSCHIG00000024582	CELF1	98	80.497	Capra_hircus
ENSAMXG00000020576	celf1	96	81.071	ENSTSYG00000003866	CELF1	100	81.980	Carlito_syrichta
ENSAMXG00000020576	celf1	92	60.442	ENSCAPG00000006787	CELF1	94	59.920	Cavia_aperea
ENSAMXG00000020576	celf1	93	82.937	ENSCPOG00000036381	CELF1	100	83.333	Cavia_porcellus
ENSAMXG00000020576	celf1	96	80.880	ENSCCAG00000033487	CELF1	100	81.980	Cebus_capucinus
ENSAMXG00000020576	celf1	93	82.937	ENSCATG00000040143	CELF1	100	83.135	Cercocebus_atys
ENSAMXG00000020576	celf1	96	81.262	ENSCLAG00000011791	CELF1	100	79.365	Chinchilla_lanigera
ENSAMXG00000020576	celf1	96	81.262	ENSCSAG00000005786	CELF1	98	80.344	Chlorocebus_sabaeus
ENSAMXG00000020576	celf1	57	97.872	ENSCHOG00000004196	-	68	97.872	Choloepus_hoffmanni
ENSAMXG00000020576	celf1	96	82.534	ENSCPBG00000022914	CELF1	100	83.794	Chrysemys_picta_bellii
ENSAMXG00000020576	celf1	96	81.071	ENSCANG00000032689	CELF1	100	83.800	Colobus_angolensis_palliatus
ENSAMXG00000020576	celf1	96	80.688	ENSCGRG00001011274	Celf1	98	79.771	Cricetulus_griseus_chok1gshd
ENSAMXG00000020576	celf1	96	80.688	ENSCGRG00000015357	Celf1	98	79.771	Cricetulus_griseus_crigri
ENSAMXG00000020576	celf1	79	91.852	ENSCSEG00000008675	celf1	100	73.767	Cynoglossus_semilaevis
ENSAMXG00000020576	celf1	100	94.019	ENSDARG00000005315	celf1	100	95.858	Danio_rerio
ENSAMXG00000020576	celf1	96	81.071	ENSDNOG00000009523	CELF1	100	83.135	Dasypus_novemcinctus
ENSAMXG00000020576	celf1	96	73.410	ENSDORG00000013721	Celf1	96	74.802	Dipodomys_ordii
ENSAMXG00000020576	celf1	68	90.698	ENSETEG00000004507	CELF1	83	90.698	Echinops_telfairi
ENSAMXG00000020576	celf1	96	74.952	ENSEASG00005010831	CELF1	98	75.335	Equus_asinus_asinus
ENSAMXG00000020576	celf1	96	82.466	ENSECAG00000007741	CELF1	100	82.800	Equus_caballus
ENSAMXG00000020576	celf1	93	69.048	ENSEEUG00000009782	CELF1	100	68.515	Erinaceus_europaeus
ENSAMXG00000020576	celf1	100	93.458	ENSELUG00000023173	celf1	100	94.567	Esox_lucius
ENSAMXG00000020576	celf1	96	81.453	ENSFCAG00000002535	CELF1	100	82.143	Felis_catus
ENSAMXG00000020576	celf1	96	82.726	ENSFALG00000006402	CELF1	98	82.726	Ficedula_albicollis
ENSAMXG00000020576	celf1	93	82.840	ENSFDAG00000008517	CELF1	100	83.135	Fukomys_damarensis
ENSAMXG00000020576	celf1	95	88.560	ENSGMOG00000012783	celf1	100	87.968	Gadus_morhua
ENSAMXG00000020576	celf1	96	82.917	ENSGALG00000008097	CELF1	100	84.861	Gallus_gallus
ENSAMXG00000020576	celf1	99	82.584	ENSGACG00000014226	celf1	99	82.004	Gasterosteus_aculeatus
ENSAMXG00000020576	celf1	93	84.661	ENSGAGG00000011562	CELF1	100	83.068	Gopherus_agassizii
ENSAMXG00000020576	celf1	96	80.880	ENSGGOG00000004106	CELF1	98	81.262	Gorilla_gorilla
ENSAMXG00000020576	celf1	97	85.962	ENSHBUG00000017881	celf1	98	85.797	Haplochromis_burtoni
ENSAMXG00000020576	celf1	93	77.844	ENSHGLG00000019214	-	100	77.645	Heterocephalus_glaber_female
ENSAMXG00000020576	celf1	93	82.540	ENSHGLG00000006909	-	100	82.937	Heterocephalus_glaber_female
ENSAMXG00000020576	celf1	93	80.040	ENSHGLG00100017423	-	100	78.685	Heterocephalus_glaber_male
ENSAMXG00000020576	celf1	93	82.540	ENSHGLG00100013863	-	100	82.937	Heterocephalus_glaber_male
ENSAMXG00000020576	celf1	93	87.400	ENSHCOG00000000258	celf1	100	87.026	Hippocampus_comes
ENSAMXG00000020576	celf1	93	96.177	ENSIPUG00000023708	celf1	100	96.177	Ictalurus_punctatus
ENSAMXG00000020576	celf1	93	82.840	ENSSTOG00000000613	CELF1	100	83.135	Ictidomys_tridecemlineatus
ENSAMXG00000020576	celf1	96	81.453	ENSJJAG00000020280	Celf1	98	80.534	Jaculus_jaculus
ENSAMXG00000020576	celf1	65	85.511	ENSLBEG00000002047	-	98	84.703	Labrus_bergylta
ENSAMXG00000020576	celf1	100	84.771	ENSLBEG00000018296	celf1	100	84.037	Labrus_bergylta
ENSAMXG00000020576	celf1	68	70.930	ENSLACG00000018990	CELF1	90	70.745	Latimeria_chalumnae
ENSAMXG00000020576	celf1	94	92.445	ENSLOCG00000005966	celf1	95	92.247	Lepisosteus_oculatus
ENSAMXG00000020576	celf1	95	82.490	ENSLAFG00000003484	CELF1	97	82.296	Loxodonta_africana
ENSAMXG00000020576	celf1	93	83.800	ENSMFAG00000003505	CELF1	100	83.800	Macaca_fascicularis
ENSAMXG00000020576	celf1	95	82.941	ENSMMUG00000011657	CELF1	99	83.865	Macaca_mulatta
ENSAMXG00000020576	celf1	93	84.000	ENSMNEG00000022558	CELF1	100	83.800	Macaca_nemestrina
ENSAMXG00000020576	celf1	96	81.071	ENSMLEG00000040834	CELF1	100	83.800	Mandrillus_leucophaeus
ENSAMXG00000020576	celf1	92	84.966	ENSMAMG00000010052	celf1	100	86.235	Mastacembelus_armatus
ENSAMXG00000020576	celf1	97	85.962	ENSMZEG00005018307	celf1	100	85.425	Maylandia_zebra
ENSAMXG00000020576	celf1	93	84.950	ENSMGAG00000010629	CELF1	97	84.752	Meleagris_gallopavo
ENSAMXG00000020576	celf1	96	80.688	ENSMAUG00000009468	Celf1	100	82.738	Mesocricetus_auratus
ENSAMXG00000020576	celf1	96	80.880	ENSMICG00000045113	CELF1	98	81.262	Microcebus_murinus
ENSAMXG00000020576	celf1	96	80.880	ENSMOCG00000012633	Celf1	100	82.937	Microtus_ochrogaster
ENSAMXG00000020576	celf1	100	85.178	ENSMMOG00000015460	celf1	100	84.112	Mola_mola
ENSAMXG00000020576	celf1	93	83.929	ENSMODG00000019913	CELF1	100	82.970	Monodelphis_domestica
ENSAMXG00000020576	celf1	96	80.880	MGP_CAROLIEiJ_G0023949	Celf1	100	83.600	Mus_caroli
ENSAMXG00000020576	celf1	96	80.880	ENSMUSG00000005506	Celf1	100	83.600	Mus_musculus
ENSAMXG00000020576	celf1	96	80.880	MGP_PahariEiJ_G0025385	Celf1	100	83.600	Mus_pahari
ENSAMXG00000020576	celf1	96	80.688	MGP_SPRETEiJ_G0024859	Celf1	100	83.400	Mus_spretus
ENSAMXG00000020576	celf1	96	81.453	ENSMPUG00000003960	CELF1	92	80.306	Mustela_putorius_furo
ENSAMXG00000020576	celf1	96	80.418	ENSMLUG00000016631	CELF1	98	80.798	Myotis_lucifugus
ENSAMXG00000020576	celf1	96	79.350	ENSNGAG00000017390	Celf1	98	78.435	Nannospalax_galili
ENSAMXG00000020576	celf1	92	57.631	ENSNBRG00000023547	-	85	58.200	Neolamprologus_brichardi
ENSAMXG00000020576	celf1	96	81.071	ENSNLEG00000014638	CELF1	100	83.800	Nomascus_leucogenys
ENSAMXG00000020576	celf1	93	84.127	ENSMEUG00000007763	CELF1	100	83.168	Notamacropus_eugenii
ENSAMXG00000020576	celf1	93	82.540	ENSOPRG00000003239	-	100	81.584	Ochotona_princeps
ENSAMXG00000020576	celf1	96	81.262	ENSODEG00000015204	CELF1	98	80.344	Octodon_degus
ENSAMXG00000020576	celf1	100	84.387	ENSONIG00000008300	celf1	98	85.441	Oreochromis_niloticus
ENSAMXG00000020576	celf1	93	84.024	ENSOANG00000007896	CELF1	95	84.418	Ornithorhynchus_anatinus
ENSAMXG00000020576	celf1	93	83.235	ENSOCUG00000001311	CELF1	98	80.534	Oryctolagus_cuniculus
ENSAMXG00000020576	celf1	92	84.685	ENSOMEG00000002381	celf1	100	80.550	Oryzias_melastigma
ENSAMXG00000020576	celf1	96	80.608	ENSOGAG00000011600	CELF1	98	80.989	Otolemur_garnettii
ENSAMXG00000020576	celf1	96	80.989	ENSOARG00000006924	CELF1	100	82.341	Ovis_aries
ENSAMXG00000020576	celf1	93	82.937	ENSPPAG00000033870	CELF1	100	83.135	Pan_paniscus
ENSAMXG00000020576	celf1	96	81.453	ENSPPRG00000002376	CELF1	100	82.143	Panthera_pardus
ENSAMXG00000020576	celf1	96	81.453	ENSPTIG00000003974	CELF1	100	82.143	Panthera_tigris_altaica
ENSAMXG00000020576	celf1	96	80.880	ENSPTRG00000052299	CELF1	100	83.135	Pan_troglodytes
ENSAMXG00000020576	celf1	96	80.880	ENSPANG00000021676	CELF1	98	81.262	Papio_anubis
ENSAMXG00000020576	celf1	93	90.524	ENSPKIG00000012324	celf1	100	90.524	Paramormyrops_kingsleyae
ENSAMXG00000020576	celf1	93	80.550	ENSPSIG00000003922	CELF1	95	81.532	Pelodiscus_sinensis
ENSAMXG00000020576	celf1	97	87.200	ENSPMGG00000013192	celf1	99	77.583	Periophthalmus_magnuspinnatus
ENSAMXG00000020576	celf1	96	80.880	ENSPEMG00000015644	Celf1	100	82.937	Peromyscus_maniculatus_bairdii
ENSAMXG00000020576	celf1	95	82.979	ENSPCIG00000022947	CELF1	99	82.046	Phascolarctos_cinereus
ENSAMXG00000020576	celf1	65	71.795	ENSPFOG00000000961	-	100	71.510	Poecilia_formosa
ENSAMXG00000020576	celf1	89	70.674	ENSPLAG00000019373	-	86	71.348	Poecilia_latipinna
ENSAMXG00000020576	celf1	96	74.472	ENSPREG00000022185	-	98	73.321	Poecilia_reticulata
ENSAMXG00000020576	celf1	96	80.344	ENSPPYG00000003302	CELF1	98	79.429	Pongo_abelii
ENSAMXG00000020576	celf1	93	82.341	ENSPCAG00000002631	CELF1	100	81.386	Procavia_capensis
ENSAMXG00000020576	celf1	93	78.895	ENSPCOG00000021865	CELF1	98	77.629	Propithecus_coquereli
ENSAMXG00000020576	celf1	92	82.432	ENSPVAG00000007340	CELF1	100	81.081	Pteropus_vampyrus
ENSAMXG00000020576	celf1	80	77.879	ENSPNYG00000023719	-	88	78.485	Pundamilia_nyererei
ENSAMXG00000020576	celf1	100	97.196	ENSPNAG00000013418	celf1	100	97.196	Pygocentrus_nattereri
ENSAMXG00000020576	celf1	93	82.341	ENSRNOG00000010379	Celf1	100	82.738	Rattus_norvegicus
ENSAMXG00000020576	celf1	96	80.880	ENSRBIG00000042406	CELF1	98	81.262	Rhinopithecus_bieti
ENSAMXG00000020576	celf1	96	81.071	ENSRROG00000032588	CELF1	98	80.153	Rhinopithecus_roxellana
ENSAMXG00000020576	celf1	96	73.025	ENSSBOG00000021912	CELF1	98	73.025	Saimiri_boliviensis_boliviensis
ENSAMXG00000020576	celf1	93	83.929	ENSSHAG00000017438	CELF1	100	84.325	Sarcophilus_harrisii
ENSAMXG00000020576	celf1	100	90.637	ENSSFOG00015019353	celf1	100	90.637	Scleropages_formosus
ENSAMXG00000020576	celf1	100	86.456	ENSSMAG00000013827	celf1	100	85.900	Scophthalmus_maximus
ENSAMXG00000020576	celf1	100	85.900	ENSSDUG00000011558	celf1	100	85.343	Seriola_dumerili
ENSAMXG00000020576	celf1	100	86.085	ENSSLDG00000012863	celf1	100	85.529	Seriola_lalandi_dorsalis
ENSAMXG00000020576	celf1	93	78.770	ENSSARG00000003207	CELF1	100	77.579	Sorex_araneus
ENSAMXG00000020576	celf1	96	81.905	ENSSPUG00000004228	CELF1	98	82.286	Sphenodon_punctatus
ENSAMXG00000020576	celf1	93	90.020	ENSSPAG00000009569	celf1	100	90.220	Stegastes_partitus
ENSAMXG00000020576	celf1	96	81.453	ENSSSCG00000013233	CELF1	100	82.143	Sus_scrofa
ENSAMXG00000020576	celf1	96	81.905	ENSTGUG00000010377	CELF1	98	80.762	Taeniopygia_guttata
ENSAMXG00000020576	celf1	93	67.129	ENSTRUG00000000617	celf1	84	97.619	Takifugu_rubripes
ENSAMXG00000020576	celf1	75	93.421	ENSTBEG00000005140	CELF1	79	93.985	Tupaia_belangeri
ENSAMXG00000020576	celf1	93	83.333	ENSTTRG00000014157	CELF1	100	82.143	Tursiops_truncatus
ENSAMXG00000020576	celf1	89	82.192	ENSUAMG00000000223	CELF1	98	78.436	Ursus_americanus
ENSAMXG00000020576	celf1	96	81.453	ENSUMAG00000009218	CELF1	98	80.306	Ursus_maritimus
ENSAMXG00000020576	celf1	81	94.382	ENSVPAG00000000336	CELF1	87	94.382	Vicugna_pacos
ENSAMXG00000020576	celf1	96	81.453	ENSVVUG00000023439	CELF1	100	82.143	Vulpes_vulpes
ENSAMXG00000020576	celf1	93	81.729	ENSXETG00000009044	celf1	100	79.764	Xenopus_tropicalis
ENSAMXG00000020576	celf1	88	58.859	ENSXCOG00000017706	-	87	60.845	Xiphophorus_couchianus
ENSAMXG00000020576	celf1	93	75.150	ENSXMAG00000029339	-	100	71.881	Xiphophorus_maculatus