EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020595 (Gene tree)
Gene ID: 103032237
Gene Symbol: zcchc17
Alias: ps1d|zgc:85656
Full Name: zinc finger CCHC-type containing 17
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12031 bases
Position: chr23:28994518-29006548
Accession: 103032237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021210	S1	PF00575.23	4.7e-12	1	1
ENSAMXP00000034877	S1	PF00575.23	4.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021210	-	690	-	ENSAMXP00000021210	229 (aa)	-	W5LMZ8
ENSAMXT00000037575	-	5191	XM_007245668	ENSAMXP00000034877	231 (aa)	XP_007245730	UPI000BBD7EE5

Gene Model

Click here to download ENSAMXG00000020595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020595	zcchc17	69	65.823	ENSG00000121766	ZCCHC17	98	64.336	Homo_sapiens
ENSAMXG00000020595	zcchc17	76	74.011	ENSAPOG00000021724	zcchc17	71	73.864	Acanthochromis_polyacanthus
ENSAMXG00000020595	zcchc17	69	65.823	ENSAMEG00000017710	-	67	66.667	Ailuropoda_melanoleuca
ENSAMXG00000020595	zcchc17	75	73.256	ENSACIG00000020915	zcchc17	93	76.978	Amphilophus_citrinellus
ENSAMXG00000020595	zcchc17	76	74.011	ENSAOCG00000003880	zcchc17	72	73.864	Amphiprion_ocellaris
ENSAMXG00000020595	zcchc17	93	69.585	ENSAPEG00000014460	zcchc17	73	73.864	Amphiprion_percula
ENSAMXG00000020595	zcchc17	68	78.344	ENSATEG00000015942	zcchc17	71	75.723	Anabas_testudineus
ENSAMXG00000020595	zcchc17	62	71.329	ENSACAG00000000389	ZCCHC17	65	70.323	Anolis_carolinensis
ENSAMXG00000020595	zcchc17	69	65.823	ENSANAG00000024208	ZCCHC17	98	64.336	Aotus_nancymaae
ENSAMXG00000020595	zcchc17	74	75.294	ENSACLG00000019174	zcchc17	69	75.294	Astatotilapia_calliptera
ENSAMXG00000020595	zcchc17	69	65.823	ENSBTAG00000016818	ZCCHC17	67	66.667	Bos_taurus
ENSAMXG00000020595	zcchc17	69	63.924	ENSBTAG00000001432	-	68	64.815	Bos_taurus
ENSAMXG00000020595	zcchc17	69	65.190	ENSCJAG00000006259	ZCCHC17	98	63.636	Callithrix_jacchus
ENSAMXG00000020595	zcchc17	69	64.557	ENSCJAG00000045207	-	67	65.432	Callithrix_jacchus
ENSAMXG00000020595	zcchc17	69	65.823	ENSCAFG00000011131	-	67	66.667	Canis_familiaris
ENSAMXG00000020595	zcchc17	69	63.924	ENSCAFG00000001857	-	68	64.815	Canis_familiaris
ENSAMXG00000020595	zcchc17	57	64.885	ENSCAFG00020024828	ZCCHC17	88	65.942	Canis_lupus_dingo
ENSAMXG00000020595	zcchc17	63	60.690	ENSCAFG00020016032	-	91	60.690	Canis_lupus_dingo
ENSAMXG00000020595	zcchc17	69	65.823	ENSCHIG00000015629	-	67	66.667	Capra_hircus
ENSAMXG00000020595	zcchc17	69	65.823	ENSTSYG00000000490	-	98	64.336	Carlito_syrichta
ENSAMXG00000020595	zcchc17	85	57.653	ENSCAPG00000006774	ZCCHC17	75	66.049	Cavia_aperea
ENSAMXG00000020595	zcchc17	69	65.190	ENSCPOG00000022394	-	79	66.049	Cavia_porcellus
ENSAMXG00000020595	zcchc17	69	65.823	ENSCPOG00000000106	ZCCHC17	67	66.667	Cavia_porcellus
ENSAMXG00000020595	zcchc17	69	65.823	ENSCCAG00000033666	ZCCHC17	98	64.336	Cebus_capucinus
ENSAMXG00000020595	zcchc17	69	65.823	ENSCATG00000044586	ZCCHC17	98	64.336	Cercocebus_atys
ENSAMXG00000020595	zcchc17	68	66.242	ENSCLAG00000008794	ZCCHC17	67	67.284	Chinchilla_lanigera
ENSAMXG00000020595	zcchc17	69	65.823	ENSCSAG00000001032	ZCCHC17	67	66.667	Chlorocebus_sabaeus
ENSAMXG00000020595	zcchc17	69	53.797	ENSCHOG00000001581	ZCCHC17	68	54.938	Choloepus_hoffmanni
ENSAMXG00000020595	zcchc17	69	65.823	ENSCANG00000038509	ZCCHC17	98	64.336	Colobus_angolensis_palliatus
ENSAMXG00000020595	zcchc17	68	66.242	ENSCGRG00001014387	Zcchc17	69	65.269	Cricetulus_griseus_chok1gshd
ENSAMXG00000020595	zcchc17	68	66.242	ENSCGRG00000013323	Zcchc17	69	65.269	Cricetulus_griseus_crigri
ENSAMXG00000020595	zcchc17	74	72.254	ENSCSEG00000016039	zcchc17	93	73.427	Cynoglossus_semilaevis
ENSAMXG00000020595	zcchc17	71	75.610	ENSCVAG00000007112	zcchc17	71	73.714	Cyprinodon_variegatus
ENSAMXG00000020595	zcchc17	76	77.654	ENSDARG00000018936	zcchc17	76	79.330	Danio_rerio
ENSAMXG00000020595	zcchc17	70	66.667	ENSDNOG00000000509	-	70	64.912	Dasypus_novemcinctus
ENSAMXG00000020595	zcchc17	60	65.942	ENSDORG00000004128	Zcchc17	91	65.942	Dipodomys_ordii
ENSAMXG00000020595	zcchc17	68	66.026	ENSETEG00000007421	ZCCHC17	71	63.905	Echinops_telfairi
ENSAMXG00000020595	zcchc17	69	65.823	ENSEASG00005010819	ZCCHC17	70	64.327	Equus_asinus_asinus
ENSAMXG00000020595	zcchc17	69	65.823	ENSECAG00000025040	ZCCHC17	61	64.327	Equus_caballus
ENSAMXG00000020595	zcchc17	69	63.924	ENSEEUG00000014855	ZCCHC17	67	64.815	Erinaceus_europaeus
ENSAMXG00000020595	zcchc17	72	76.048	ENSELUG00000002450	zcchc17	68	76.875	Esox_lucius
ENSAMXG00000020595	zcchc17	69	65.823	ENSFCAG00000004196	ZCCHC17	97	64.336	Felis_catus
ENSAMXG00000020595	zcchc17	68	66.026	ENSFALG00000001165	ZCCHC17	63	69.231	Ficedula_albicollis
ENSAMXG00000020595	zcchc17	69	65.823	ENSFDAG00000016520	ZCCHC17	67	66.667	Fukomys_damarensis
ENSAMXG00000020595	zcchc17	68	76.582	ENSFHEG00000007848	zcchc17	69	76.331	Fundulus_heteroclitus
ENSAMXG00000020595	zcchc17	69	74.214	ENSGMOG00000010452	zcchc17	68	71.512	Gadus_morhua
ENSAMXG00000020595	zcchc17	66	68.212	ENSGALG00000000618	ZCCHC17	65	69.231	Gallus_gallus
ENSAMXG00000020595	zcchc17	69	76.101	ENSGAFG00000015591	zcchc17	69	75.000	Gambusia_affinis
ENSAMXG00000020595	zcchc17	71	71.779	ENSGACG00000005616	zcchc17	67	68.605	Gasterosteus_aculeatus
ENSAMXG00000020595	zcchc17	70	64.596	ENSGAGG00000019515	ZCCHC17	66	64.596	Gopherus_agassizii
ENSAMXG00000020595	zcchc17	69	65.823	ENSGGOG00000009126	ZCCHC17	98	64.336	Gorilla_gorilla
ENSAMXG00000020595	zcchc17	74	75.294	ENSHBUG00000018638	zcchc17	69	75.294	Haplochromis_burtoni
ENSAMXG00000020595	zcchc17	93	47.196	ENSHGLG00000014866	-	71	56.790	Heterocephalus_glaber_female
ENSAMXG00000020595	zcchc17	69	65.823	ENSHGLG00000019323	ZCCHC17	67	66.667	Heterocephalus_glaber_female
ENSAMXG00000020595	zcchc17	69	61.392	ENSHGLG00000005931	-	72	61.728	Heterocephalus_glaber_female
ENSAMXG00000020595	zcchc17	93	47.196	ENSHGLG00100000976	-	71	56.790	Heterocephalus_glaber_male
ENSAMXG00000020595	zcchc17	69	61.392	ENSHGLG00100009772	-	73	62.112	Heterocephalus_glaber_male
ENSAMXG00000020595	zcchc17	57	64.885	ENSHGLG00100014521	ZCCHC17	90	65.942	Heterocephalus_glaber_male
ENSAMXG00000020595	zcchc17	68	61.146	ENSHGLG00100019907	-	67	61.728	Heterocephalus_glaber_male
ENSAMXG00000020595	zcchc17	70	76.543	ENSHCOG00000005075	zcchc17	71	73.143	Hippocampus_comes
ENSAMXG00000020595	zcchc17	92	80.556	ENSIPUG00000020511	zcchc17	77	82.682	Ictalurus_punctatus
ENSAMXG00000020595	zcchc17	69	65.823	ENSSTOG00000003825	ZCCHC17	67	66.667	Ictidomys_tridecemlineatus
ENSAMXG00000020595	zcchc17	76	73.034	ENSKMAG00000003662	zcchc17	72	73.446	Kryptolebias_marmoratus
ENSAMXG00000020595	zcchc17	70	72.840	ENSLBEG00000002644	zcchc17	70	70.115	Labrus_bergylta
ENSAMXG00000020595	zcchc17	59	72.059	ENSLACG00000016945	ZCCHC17	56	74.242	Latimeria_chalumnae
ENSAMXG00000020595	zcchc17	75	73.256	ENSLOCG00000005280	zcchc17	64	75.301	Lepisosteus_oculatus
ENSAMXG00000020595	zcchc17	69	65.823	ENSLAFG00000015364	ZCCHC17	66	66.667	Loxodonta_africana
ENSAMXG00000020595	zcchc17	69	65.823	ENSMFAG00000039045	ZCCHC17	98	64.336	Macaca_fascicularis
ENSAMXG00000020595	zcchc17	69	65.823	ENSMMUG00000012156	ZCCHC17	98	64.336	Macaca_mulatta
ENSAMXG00000020595	zcchc17	69	65.823	ENSMNEG00000032021	ZCCHC17	98	64.336	Macaca_nemestrina
ENSAMXG00000020595	zcchc17	69	65.823	ENSMLEG00000040817	ZCCHC17	98	64.336	Mandrillus_leucophaeus
ENSAMXG00000020595	zcchc17	69	79.245	ENSMAMG00000011701	zcchc17	69	77.193	Mastacembelus_armatus
ENSAMXG00000020595	zcchc17	74	75.294	ENSMZEG00005005784	zcchc17	69	75.294	Maylandia_zebra
ENSAMXG00000020595	zcchc17	66	69.536	ENSMGAG00000000777	ZCCHC17	63	70.513	Meleagris_gallopavo
ENSAMXG00000020595	zcchc17	61	67.376	ENSMAUG00000005269	Zcchc17	63	69.718	Mesocricetus_auratus
ENSAMXG00000020595	zcchc17	69	65.823	ENSMICG00000009354	-	98	64.336	Microcebus_murinus
ENSAMXG00000020595	zcchc17	69	58.861	ENSMICG00000028289	-	66	59.877	Microcebus_murinus
ENSAMXG00000020595	zcchc17	97	46.154	ENSMICG00000027526	-	74	53.571	Microcebus_murinus
ENSAMXG00000020595	zcchc17	68	66.242	ENSMOCG00000014937	Zcchc17	68	67.284	Microtus_ochrogaster
ENSAMXG00000020595	zcchc17	67	69.935	ENSMMOG00000019813	zcchc17	67	69.935	Mola_mola
ENSAMXG00000020595	zcchc17	68	66.026	ENSMODG00000017082	-	78	59.162	Monodelphis_domestica
ENSAMXG00000020595	zcchc17	77	54.494	ENSMODG00000025345	-	79	56.886	Monodelphis_domestica
ENSAMXG00000020595	zcchc17	68	62.179	ENSMODG00000020372	-	86	63.354	Monodelphis_domestica
ENSAMXG00000020595	zcchc17	76	72.414	ENSMALG00000016295	zcchc17	74	73.837	Monopterus_albus
ENSAMXG00000020595	zcchc17	68	66.242	MGP_CAROLIEiJ_G0026546	Zcchc17	67	67.284	Mus_caroli
ENSAMXG00000020595	zcchc17	68	66.242	ENSMUSG00000028772	Zcchc17	67	67.284	Mus_musculus
ENSAMXG00000020595	zcchc17	68	66.242	MGP_PahariEiJ_G0028878	Zcchc17	67	67.284	Mus_pahari
ENSAMXG00000020595	zcchc17	68	66.242	MGP_SPRETEiJ_G0027526	Zcchc17	67	67.284	Mus_spretus
ENSAMXG00000020595	zcchc17	69	57.595	ENSMPUG00000015442	ZCCHC17	68	58.642	Mustela_putorius_furo
ENSAMXG00000020595	zcchc17	70	66.049	ENSMLUG00000000594	ZCCHC17	68	66.049	Myotis_lucifugus
ENSAMXG00000020595	zcchc17	69	65.190	ENSNGAG00000022689	Zcchc17	67	66.049	Nannospalax_galili
ENSAMXG00000020595	zcchc17	69	65.823	ENSNLEG00000001493	ZCCHC17	98	64.336	Nomascus_leucogenys
ENSAMXG00000020595	zcchc17	60	69.565	ENSOPRG00000014449	ZCCHC17	72	70.423	Ochotona_princeps
ENSAMXG00000020595	zcchc17	69	65.823	ENSODEG00000003683	ZCCHC17	67	66.667	Octodon_degus
ENSAMXG00000020595	zcchc17	76	71.839	ENSONIG00000002308	zcchc17	69	74.118	Oreochromis_niloticus
ENSAMXG00000020595	zcchc17	69	62.658	ENSOCUG00000027238	-	67	63.580	Oryctolagus_cuniculus
ENSAMXG00000020595	zcchc17	78	70.391	ENSORLG00000011563	zcchc17	78	73.410	Oryzias_latipes
ENSAMXG00000020595	zcchc17	78	70.391	ENSORLG00020019636	zcchc17	82	73.410	Oryzias_latipes_hni
ENSAMXG00000020595	zcchc17	74	72.941	ENSORLG00015011437	zcchc17	71	72.674	Oryzias_latipes_hsok
ENSAMXG00000020595	zcchc17	77	69.101	ENSOMEG00000009464	zcchc17	71	71.676	Oryzias_melastigma
ENSAMXG00000020595	zcchc17	69	66.456	ENSOGAG00000013749	ZCCHC17	67	67.284	Otolemur_garnettii
ENSAMXG00000020595	zcchc17	69	65.409	ENSOARG00000001618	-	67	66.258	Ovis_aries
ENSAMXG00000020595	zcchc17	69	65.823	ENSPPAG00000030937	ZCCHC17	98	64.336	Pan_paniscus
ENSAMXG00000020595	zcchc17	69	65.823	ENSPPRG00000003044	ZCCHC17	97	64.336	Panthera_pardus
ENSAMXG00000020595	zcchc17	69	65.823	ENSPTIG00000010650	ZCCHC17	97	64.336	Panthera_tigris_altaica
ENSAMXG00000020595	zcchc17	69	65.823	ENSPTRG00000000456	ZCCHC17	98	64.336	Pan_troglodytes
ENSAMXG00000020595	zcchc17	69	65.823	ENSPANG00000016167	ZCCHC17	98	64.336	Papio_anubis
ENSAMXG00000020595	zcchc17	92	66.667	ENSPKIG00000010742	zcchc17	68	76.608	Paramormyrops_kingsleyae
ENSAMXG00000020595	zcchc17	68	65.605	ENSPSIG00000007187	ZCCHC17	65	66.667	Pelodiscus_sinensis
ENSAMXG00000020595	zcchc17	75	74.138	ENSPMGG00000005830	zcchc17	71	74.566	Periophthalmus_magnuspinnatus
ENSAMXG00000020595	zcchc17	68	65.605	ENSPEMG00000015853	-	68	66.667	Peromyscus_maniculatus_bairdii
ENSAMXG00000020595	zcchc17	68	69.231	ENSPCIG00000014143	-	67	70.186	Phascolarctos_cinereus
ENSAMXG00000020595	zcchc17	92	65.421	ENSPFOG00000007896	zcchc17	69	76.543	Poecilia_formosa
ENSAMXG00000020595	zcchc17	72	75.301	ENSPLAG00000007114	zcchc17	69	74.269	Poecilia_latipinna
ENSAMXG00000020595	zcchc17	72	75.301	ENSPMEG00000014567	zcchc17	69	74.269	Poecilia_mexicana
ENSAMXG00000020595	zcchc17	69	75.472	ENSPREG00000005325	zcchc17	57	72.832	Poecilia_reticulata
ENSAMXG00000020595	zcchc17	69	63.924	ENSPPYG00000001617	-	57	64.815	Pongo_abelii
ENSAMXG00000020595	zcchc17	69	60.759	ENSPCAG00000011665	ZCCHC17	68	61.728	Procavia_capensis
ENSAMXG00000020595	zcchc17	69	65.823	ENSPCOG00000024007	ZCCHC17	98	64.336	Propithecus_coquereli
ENSAMXG00000020595	zcchc17	69	65.823	ENSPVAG00000014747	ZCCHC17	67	66.667	Pteropus_vampyrus
ENSAMXG00000020595	zcchc17	74	75.294	ENSPNYG00000009648	zcchc17	95	80.147	Pundamilia_nyererei
ENSAMXG00000020595	zcchc17	94	87.727	ENSPNAG00000026780	zcchc17	77	89.888	Pygocentrus_nattereri
ENSAMXG00000020595	zcchc17	93	59.729	ENSRNOG00000012266	Zcchc17	67	67.901	Rattus_norvegicus
ENSAMXG00000020595	zcchc17	69	65.823	ENSRBIG00000033939	ZCCHC17	98	64.336	Rhinopithecus_bieti
ENSAMXG00000020595	zcchc17	69	65.823	ENSRROG00000028866	ZCCHC17	98	64.336	Rhinopithecus_roxellana
ENSAMXG00000020595	zcchc17	69	65.823	ENSSBOG00000029249	ZCCHC17	98	64.336	Saimiri_boliviensis_boliviensis
ENSAMXG00000020595	zcchc17	96	54.741	ENSSHAG00000008748	ZCCHC17	96	52.609	Sarcophilus_harrisii
ENSAMXG00000020595	zcchc17	87	71.921	ENSSFOG00015021334	zcchc17	67	76.023	Scleropages_formosus
ENSAMXG00000020595	zcchc17	71	77.301	ENSSMAG00000010817	zcchc17	68	74.286	Scophthalmus_maximus
ENSAMXG00000020595	zcchc17	74	76.301	ENSSDUG00000009095	zcchc17	67	77.515	Seriola_dumerili
ENSAMXG00000020595	zcchc17	75	75.581	ENSSLDG00000009837	zcchc17	82	76.023	Seriola_lalandi_dorsalis
ENSAMXG00000020595	zcchc17	72	65.663	ENSSPUG00000006912	ZCCHC17	65	65.663	Sphenodon_punctatus
ENSAMXG00000020595	zcchc17	67	76.471	ENSSPAG00000016785	zcchc17	70	73.714	Stegastes_partitus
ENSAMXG00000020595	zcchc17	69	65.823	ENSSSCG00000031639	ZCCHC17	67	66.667	Sus_scrofa
ENSAMXG00000020595	zcchc17	60	63.043	ENSTGUG00000000817	ZCCHC17	64	64.336	Taeniopygia_guttata
ENSAMXG00000020595	zcchc17	75	70.857	ENSTRUG00000013252	zcchc17	72	70.857	Takifugu_rubripes
ENSAMXG00000020595	zcchc17	76	68.571	ENSTNIG00000016980	zcchc17	74	68.966	Tetraodon_nigroviridis
ENSAMXG00000020595	zcchc17	69	65.823	ENSTTRG00000014870	ZCCHC17	67	66.667	Tursiops_truncatus
ENSAMXG00000020595	zcchc17	69	65.823	ENSUAMG00000018258	ZCCHC17	83	66.667	Ursus_americanus
ENSAMXG00000020595	zcchc17	69	65.823	ENSUMAG00000009188	-	67	66.667	Ursus_maritimus
ENSAMXG00000020595	zcchc17	69	63.924	ENSVPAG00000003834	ZCCHC17	68	65.031	Vicugna_pacos
ENSAMXG00000020595	zcchc17	72	66.061	ENSXETG00000012917	zcchc17	86	69.079	Xenopus_tropicalis
ENSAMXG00000020595	zcchc17	73	75.595	ENSXCOG00000020147	zcchc17	70	75.301	Xiphophorus_couchianus
ENSAMXG00000020595	zcchc17	73	75.000	ENSXMAG00000002980	zcchc17	69	75.000	Xiphophorus_maculatus