EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020765 (Gene tree)
Gene ID: 103036143
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3083 bases
Position: chr22:3417009-3420091
Accession: 103036143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021387	Exo_endo_phos	PF03372.23	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021387	-	1932	XM_022682234	ENSAMXP00000021387	596 (aa)	XP_022537955	W5LNH5

Gene Model

Click here to download ENSAMXG00000020765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020765's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020765	pde12	95	59.589	ENSG00000174840	PDE12	94	59.829	Homo_sapiens
ENSAMXG00000020765	pde12	96	65.009	ENSAPOG00000018806	pde12	95	65.009	Acanthochromis_polyacanthus
ENSAMXG00000020765	pde12	95	58.462	ENSAMEG00000011802	PDE12	99	58.219	Ailuropoda_melanoleuca
ENSAMXG00000020765	pde12	99	64.262	ENSACIG00000014918	pde12	98	64.262	Amphilophus_citrinellus
ENSAMXG00000020765	pde12	96	65.913	ENSAOCG00000016376	pde12	95	65.913	Amphiprion_ocellaris
ENSAMXG00000020765	pde12	96	65.913	ENSAPEG00000000756	pde12	95	65.913	Amphiprion_percula
ENSAMXG00000020765	pde12	99	64.765	ENSATEG00000003072	pde12	98	66.261	Anabas_testudineus
ENSAMXG00000020765	pde12	100	52.769	ENSACAG00000003067	PDE12	100	53.420	Anolis_carolinensis
ENSAMXG00000020765	pde12	95	58.944	ENSANAG00000011815	PDE12	94	59.316	Aotus_nancymaae
ENSAMXG00000020765	pde12	99	64.587	ENSACLG00000010127	pde12	98	64.587	Astatotilapia_calliptera
ENSAMXG00000020765	pde12	95	59.145	ENSBTAG00000015563	PDE12	94	59.487	Bos_taurus
ENSAMXG00000020765	pde12	53	30.448	WBGene00011268	pde-12	52	30.448	Caenorhabditis_elegans
ENSAMXG00000020765	pde12	95	58.603	ENSCJAG00000019905	PDE12	94	59.487	Callithrix_jacchus
ENSAMXG00000020765	pde12	95	58.234	ENSCAFG00000007792	PDE12	94	58.574	Canis_familiaris
ENSAMXG00000020765	pde12	95	58.234	ENSCAFG00020006692	PDE12	94	58.744	Canis_lupus_dingo
ENSAMXG00000020765	pde12	95	58.944	ENSCHIG00000014202	PDE12	94	59.284	Capra_hircus
ENSAMXG00000020765	pde12	95	57.699	ENSTSYG00000025750	PDE12	94	58.603	Carlito_syrichta
ENSAMXG00000020765	pde12	95	60.034	ENSCPOG00000001620	PDE12	95	60.000	Cavia_porcellus
ENSAMXG00000020765	pde12	95	53.504	ENSCCAG00000031290	PDE12	94	53.688	Cebus_capucinus
ENSAMXG00000020765	pde12	95	60.000	ENSCATG00000044539	PDE12	94	60.000	Cercocebus_atys
ENSAMXG00000020765	pde12	95	57.949	ENSCLAG00000004864	PDE12	94	58.632	Chinchilla_lanigera
ENSAMXG00000020765	pde12	95	59.316	ENSCSAG00000012275	PDE12	94	59.829	Chlorocebus_sabaeus
ENSAMXG00000020765	pde12	83	67.120	ENSCHOG00000002188	-	84	67.120	Choloepus_hoffmanni
ENSAMXG00000020765	pde12	65	67.526	ENSCHOG00000012173	-	100	63.981	Choloepus_hoffmanni
ENSAMXG00000020765	pde12	95	58.651	ENSCPBG00000012353	PDE12	91	58.651	Chrysemys_picta_bellii
ENSAMXG00000020765	pde12	93	36.620	ENSCING00000006903	-	99	39.308	Ciona_intestinalis
ENSAMXG00000020765	pde12	95	59.829	ENSCANG00000038723	PDE12	94	60.000	Colobus_angolensis_palliatus
ENSAMXG00000020765	pde12	95	57.841	ENSCGRG00001021836	Pde12	95	58.010	Cricetulus_griseus_chok1gshd
ENSAMXG00000020765	pde12	95	57.699	ENSCGRG00000012319	Pde12	95	58.037	Cricetulus_griseus_crigri
ENSAMXG00000020765	pde12	95	63.112	ENSCSEG00000018538	pde12	99	63.112	Cynoglossus_semilaevis
ENSAMXG00000020765	pde12	96	53.553	ENSCVAG00000003624	pde12	94	52.951	Cyprinodon_variegatus
ENSAMXG00000020765	pde12	96	66.551	ENSDARG00000030964	pde12	94	65.620	Danio_rerio
ENSAMXG00000020765	pde12	95	59.005	ENSDNOG00000048413	PDE12	94	59.348	Dasypus_novemcinctus
ENSAMXG00000020765	pde12	95	58.433	ENSDORG00000004313	Pde12	94	58.291	Dipodomys_ordii
ENSAMXG00000020765	pde12	95	33.165	FBgn0051759	CG31759	99	33.333	Drosophila_melanogaster
ENSAMXG00000020765	pde12	64	48.630	ENSEBUG00000004803	pde12	69	48.630	Eptatretus_burgeri
ENSAMXG00000020765	pde12	95	59.455	ENSEASG00005000644	PDE12	94	59.145	Equus_asinus_asinus
ENSAMXG00000020765	pde12	95	59.796	ENSECAG00000005326	PDE12	94	59.487	Equus_caballus
ENSAMXG00000020765	pde12	58	68.208	ENSEEUG00000010406	-	59	68.208	Erinaceus_europaeus
ENSAMXG00000020765	pde12	99	68.677	ENSELUG00000014391	pde12	96	68.677	Esox_lucius
ENSAMXG00000020765	pde12	95	59.075	ENSFCAG00000031696	PDE12	94	58.733	Felis_catus
ENSAMXG00000020765	pde12	82	60.852	ENSFALG00000008401	PDE12	99	61.258	Ficedula_albicollis
ENSAMXG00000020765	pde12	99	58.059	ENSFDAG00000021278	PDE12	98	58.059	Fukomys_damarensis
ENSAMXG00000020765	pde12	90	63.586	ENSFHEG00000018967	pde12	86	63.771	Fundulus_heteroclitus
ENSAMXG00000020765	pde12	96	61.005	ENSGMOG00000018041	pde12	99	60.381	Gadus_morhua
ENSAMXG00000020765	pde12	96	58.783	ENSGALG00000052355	PDE12	96	58.549	Gallus_gallus
ENSAMXG00000020765	pde12	99	61.322	ENSGAFG00000002045	pde12	99	60.531	Gambusia_affinis
ENSAMXG00000020765	pde12	96	65.052	ENSGACG00000003914	pde12	95	64.991	Gasterosteus_aculeatus
ENSAMXG00000020765	pde12	95	58.925	ENSGAGG00000010266	PDE12	91	58.925	Gopherus_agassizii
ENSAMXG00000020765	pde12	95	59.589	ENSGGOG00000003312	PDE12	94	60.171	Gorilla_gorilla
ENSAMXG00000020765	pde12	99	64.587	ENSHBUG00000023370	pde12	98	64.587	Haplochromis_burtoni
ENSAMXG00000020765	pde12	99	58.224	ENSHGLG00000005661	PDE12	98	58.059	Heterocephalus_glaber_female
ENSAMXG00000020765	pde12	99	58.224	ENSHGLG00100001136	PDE12	98	57.895	Heterocephalus_glaber_male
ENSAMXG00000020765	pde12	96	60.000	ENSHCOG00000013749	pde12	95	60.000	Hippocampus_comes
ENSAMXG00000020765	pde12	100	71.074	ENSIPUG00000007123	Pde12	100	72.066	Ictalurus_punctatus
ENSAMXG00000020765	pde12	95	58.262	ENSSTOG00000007861	PDE12	94	57.949	Ictidomys_tridecemlineatus
ENSAMXG00000020765	pde12	95	57.850	ENSJJAG00000006038	Pde12	94	58.020	Jaculus_jaculus
ENSAMXG00000020765	pde12	96	65.799	ENSKMAG00000018523	pde12	97	65.685	Kryptolebias_marmoratus
ENSAMXG00000020765	pde12	97	62.245	ENSLBEG00000026775	pde12	96	62.139	Labrus_bergylta
ENSAMXG00000020765	pde12	97	64.676	ENSLBEG00000009762	PDE12	95	64.786	Labrus_bergylta
ENSAMXG00000020765	pde12	100	62.957	ENSLACG00000015492	PDE12	99	62.957	Latimeria_chalumnae
ENSAMXG00000020765	pde12	96	70.139	ENSLOCG00000013277	pde12	94	70.312	Lepisosteus_oculatus
ENSAMXG00000020765	pde12	93	58.115	ENSLAFG00000002821	PDE12	100	58.639	Loxodonta_africana
ENSAMXG00000020765	pde12	95	60.000	ENSMFAG00000030966	PDE12	94	60.171	Macaca_fascicularis
ENSAMXG00000020765	pde12	95	60.000	ENSMMUG00000004052	PDE12	94	60.171	Macaca_mulatta
ENSAMXG00000020765	pde12	95	60.000	ENSMNEG00000030068	PDE12	94	60.171	Macaca_nemestrina
ENSAMXG00000020765	pde12	95	60.000	ENSMLEG00000036137	PDE12	94	60.171	Mandrillus_leucophaeus
ENSAMXG00000020765	pde12	96	66.840	ENSMAMG00000014415	pde12	95	66.840	Mastacembelus_armatus
ENSAMXG00000020765	pde12	99	64.587	ENSMZEG00005016132	pde12	98	64.587	Maylandia_zebra
ENSAMXG00000020765	pde12	96	62.912	ENSMZEG00005028202	-	99	62.912	Maylandia_zebra
ENSAMXG00000020765	pde12	53	68.438	ENSMGAG00000006449	PDE12	99	68.438	Meleagris_gallopavo
ENSAMXG00000020765	pde12	96	58.537	ENSMAUG00000000442	Pde12	95	58.435	Mesocricetus_auratus
ENSAMXG00000020765	pde12	95	58.206	ENSMICG00000005723	PDE12	94	58.803	Microcebus_murinus
ENSAMXG00000020765	pde12	95	58.419	ENSMOCG00000020734	Pde12	95	59.107	Microtus_ochrogaster
ENSAMXG00000020765	pde12	96	64.236	ENSMMOG00000013636	pde12	95	64.236	Mola_mola
ENSAMXG00000020765	pde12	96	57.633	ENSMODG00000000155	PDE12	96	57.804	Monodelphis_domestica
ENSAMXG00000020765	pde12	96	64.583	ENSMALG00000022647	pde12	95	64.583	Monopterus_albus
ENSAMXG00000020765	pde12	95	59.316	MGP_CAROLIEiJ_G0019032	Pde12	95	59.487	Mus_caroli
ENSAMXG00000020765	pde12	95	58.803	ENSMUSG00000043702	Pde12	95	58.803	Mus_musculus
ENSAMXG00000020765	pde12	95	59.658	MGP_PahariEiJ_G0030049	Pde12	95	59.658	Mus_pahari
ENSAMXG00000020765	pde12	95	59.145	MGP_SPRETEiJ_G0019916	Pde12	95	59.316	Mus_spretus
ENSAMXG00000020765	pde12	95	58.291	ENSMPUG00000016869	PDE12	94	58.462	Mustela_putorius_furo
ENSAMXG00000020765	pde12	96	58.163	ENSMLUG00000026487	PDE12	95	58.433	Myotis_lucifugus
ENSAMXG00000020765	pde12	95	59.177	ENSNGAG00000001228	Pde12	95	58.834	Nannospalax_galili
ENSAMXG00000020765	pde12	99	59.191	ENSNBRG00000015769	pde12	67	59.191	Neolamprologus_brichardi
ENSAMXG00000020765	pde12	95	60.000	ENSNLEG00000007269	-	94	60.171	Nomascus_leucogenys
ENSAMXG00000020765	pde12	95	56.724	ENSNLEG00000034833	-	94	56.499	Nomascus_leucogenys
ENSAMXG00000020765	pde12	95	55.614	ENSMEUG00000006786	PDE12	94	55.923	Notamacropus_eugenii
ENSAMXG00000020765	pde12	95	59.520	ENSOPRG00000015273	PDE12	94	60.788	Ochotona_princeps
ENSAMXG00000020765	pde12	95	59.727	ENSODEG00000006268	PDE12	94	59.829	Octodon_degus
ENSAMXG00000020765	pde12	95	65.965	ENSONIG00000004293	pde12	99	65.965	Oreochromis_niloticus
ENSAMXG00000020765	pde12	90	55.935	ENSOANG00000012885	PDE12	99	56.475	Ornithorhynchus_anatinus
ENSAMXG00000020765	pde12	95	59.177	ENSOCUG00000000823	PDE12	94	59.556	Oryctolagus_cuniculus
ENSAMXG00000020765	pde12	95	64.049	ENSORLG00000017444	pde12	94	63.811	Oryzias_latipes
ENSAMXG00000020765	pde12	96	63.605	ENSORLG00020010469	pde12	95	63.368	Oryzias_latipes_hni
ENSAMXG00000020765	pde12	96	64.125	ENSORLG00015004093	pde12	95	63.889	Oryzias_latipes_hsok
ENSAMXG00000020765	pde12	96	64.000	ENSOMEG00000020900	pde12	95	62.957	Oryzias_melastigma
ENSAMXG00000020765	pde12	95	58.037	ENSOGAG00000024093	PDE12	94	58.462	Otolemur_garnettii
ENSAMXG00000020765	pde12	91	58.082	ENSOARG00000013642	PDE12	100	58.615	Ovis_aries
ENSAMXG00000020765	pde12	95	59.075	ENSPPAG00000034712	PDE12	94	59.658	Pan_paniscus
ENSAMXG00000020765	pde12	95	58.904	ENSPPRG00000011738	PDE12	94	59.075	Panthera_pardus
ENSAMXG00000020765	pde12	83	60.672	ENSPTIG00000019166	PDE12	94	60.672	Panthera_tigris_altaica
ENSAMXG00000020765	pde12	95	59.247	ENSPTRG00000030221	PDE12	94	59.487	Pan_troglodytes
ENSAMXG00000020765	pde12	95	59.829	ENSPANG00000007324	PDE12	94	60.000	Papio_anubis
ENSAMXG00000020765	pde12	99	64.915	ENSPKIG00000025354	pde12	98	64.915	Paramormyrops_kingsleyae
ENSAMXG00000020765	pde12	95	60.312	ENSPSIG00000004926	PDE12	91	60.312	Pelodiscus_sinensis
ENSAMXG00000020765	pde12	95	58.947	ENSPMGG00000006742	pde12	96	59.123	Periophthalmus_magnuspinnatus
ENSAMXG00000020765	pde12	82	63.294	ENSPEMG00000007259	Pde12	89	63.529	Peromyscus_maniculatus_bairdii
ENSAMXG00000020765	pde12	99	62.914	ENSPFOG00000011864	pde12	99	62.252	Poecilia_formosa
ENSAMXG00000020765	pde12	74	66.219	ENSPLAG00000023871	pde12	80	66.219	Poecilia_latipinna
ENSAMXG00000020765	pde12	96	64.696	ENSPMEG00000005674	pde12	95	64.000	Poecilia_mexicana
ENSAMXG00000020765	pde12	99	62.023	ENSPREG00000022831	pde12	99	61.360	Poecilia_reticulata
ENSAMXG00000020765	pde12	96	58.883	ENSPPYG00000013769	PDE12	95	59.560	Pongo_abelii
ENSAMXG00000020765	pde12	95	58.376	ENSPCOG00000026004	PDE12	94	58.803	Propithecus_coquereli
ENSAMXG00000020765	pde12	95	59.036	ENSPVAG00000008885	PDE12	94	59.036	Pteropus_vampyrus
ENSAMXG00000020765	pde12	99	64.755	ENSPNYG00000013258	pde12	98	64.755	Pundamilia_nyererei
ENSAMXG00000020765	pde12	100	78.965	ENSPNAG00000029032	pde12	100	78.965	Pygocentrus_nattereri
ENSAMXG00000020765	pde12	95	59.487	ENSRNOG00000059442	Pde12	95	59.658	Rattus_norvegicus
ENSAMXG00000020765	pde12	95	60.000	ENSRBIG00000040704	PDE12	94	60.171	Rhinopithecus_bieti
ENSAMXG00000020765	pde12	95	60.000	ENSRROG00000031279	PDE12	94	60.171	Rhinopithecus_roxellana
ENSAMXG00000020765	pde12	95	58.632	ENSSBOG00000023974	PDE12	95	58.574	Saimiri_boliviensis_boliviensis
ENSAMXG00000020765	pde12	80	73.810	ENSSFOG00015003468	pde12	89	73.810	Scleropages_formosus
ENSAMXG00000020765	pde12	95	63.304	ENSSMAG00000003258	pde12	94	63.652	Scophthalmus_maximus
ENSAMXG00000020765	pde12	99	64.073	ENSSDUG00000020470	pde12	99	64.073	Seriola_dumerili
ENSAMXG00000020765	pde12	99	62.562	ENSSLDG00000019833	pde12	99	62.562	Seriola_lalandi_dorsalis
ENSAMXG00000020765	pde12	95	60.241	ENSSARG00000007201	PDE12	95	60.241	Sorex_araneus
ENSAMXG00000020765	pde12	96	64.348	ENSSPAG00000014980	pde12	95	64.348	Stegastes_partitus
ENSAMXG00000020765	pde12	53	60.502	ENSSSCG00000034476	-	74	60.502	Sus_scrofa
ENSAMXG00000020765	pde12	95	58.433	ENSSSCG00000011465	-	94	58.974	Sus_scrofa
ENSAMXG00000020765	pde12	62	66.577	ENSTGUG00000007290	PDE12	100	66.577	Taeniopygia_guttata
ENSAMXG00000020765	pde12	96	63.700	ENSTRUG00000005159	pde12	94	63.258	Takifugu_rubripes
ENSAMXG00000020765	pde12	95	63.860	ENSTNIG00000017497	pde12	94	63.860	Tetraodon_nigroviridis
ENSAMXG00000020765	pde12	76	67.869	ENSTBEG00000008202	PDE12	76	67.869	Tupaia_belangeri
ENSAMXG00000020765	pde12	95	58.291	ENSTTRG00000014707	PDE12	94	58.291	Tursiops_truncatus
ENSAMXG00000020765	pde12	71	50.350	ENSUAMG00000008368	-	90	50.350	Ursus_americanus
ENSAMXG00000020765	pde12	95	58.803	ENSUAMG00000020634	-	94	58.974	Ursus_americanus
ENSAMXG00000020765	pde12	74	62.780	ENSUMAG00000021906	PDE12	100	63.004	Ursus_maritimus
ENSAMXG00000020765	pde12	95	58.773	ENSVVUG00000020335	PDE12	92	58.944	Vulpes_vulpes
ENSAMXG00000020765	pde12	95	50.264	ENSXETG00000008653	pde12	97	49.649	Xenopus_tropicalis
ENSAMXG00000020765	pde12	99	62.791	ENSXCOG00000000407	pde12	98	63.778	Xiphophorus_couchianus
ENSAMXG00000020765	pde12	100	63.036	ENSXMAG00000013370	pde12	99	62.355	Xiphophorus_maculatus