EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020772 (Gene tree)
Gene ID: 103027939
Gene Symbol: fbxo18
Alias: si:dkey-22l11.2
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 22021 bases
Position: chr7:39374887-39396907
Accession: 103027939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021393	UvrD-helicase	PF00580.21	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021393	-	3342	XM_022671866	ENSAMXP00000021393	962 (aa)	XP_022527587	W5LNI1

Gene Model

Click here to download ENSAMXG00000020772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020772's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020772	fbxo18	99	45.927	ENSG00000134452	FBH1	78	50.567	Homo_sapiens
ENSAMXG00000020772	fbxo18	98	50.620	ENSAPOG00000007042	fbxo18	90	50.617	Acanthochromis_polyacanthus
ENSAMXG00000020772	fbxo18	99	45.770	ENSAMEG00000002043	FBH1	90	45.603	Ailuropoda_melanoleuca
ENSAMXG00000020772	fbxo18	98	46.967	ENSACIG00000006171	fbxo18	88	52.031	Amphilophus_citrinellus
ENSAMXG00000020772	fbxo18	88	51.740	ENSAOCG00000014826	fbxo18	91	50.152	Amphiprion_ocellaris
ENSAMXG00000020772	fbxo18	88	51.624	ENSAPEG00000022846	fbxo18	91	49.949	Amphiprion_percula
ENSAMXG00000020772	fbxo18	98	49.506	ENSATEG00000004547	fbxo18	89	49.291	Anabas_testudineus
ENSAMXG00000020772	fbxo18	97	44.444	ENSAPLG00000009754	FBH1	90	44.340	Anas_platyrhynchos
ENSAMXG00000020772	fbxo18	80	47.975	ENSACAG00000002729	FBH1	73	48.082	Anolis_carolinensis
ENSAMXG00000020772	fbxo18	99	45.621	ENSANAG00000032436	FBH1	78	50.315	Aotus_nancymaae
ENSAMXG00000020772	fbxo18	87	51.748	ENSACLG00000004266	fbxo18	81	55.181	Astatotilapia_calliptera
ENSAMXG00000020772	fbxo18	99	45.427	ENSBTAG00000004147	FBH1	72	51.488	Bos_taurus
ENSAMXG00000020772	fbxo18	99	45.935	ENSCJAG00000020531	FBH1	90	44.852	Callithrix_jacchus
ENSAMXG00000020772	fbxo18	80	51.216	ENSCAFG00000005218	FBH1	78	51.550	Canis_familiaris
ENSAMXG00000020772	fbxo18	80	51.216	ENSCAFG00020005396	FBH1	78	51.550	Canis_lupus_dingo
ENSAMXG00000020772	fbxo18	99	45.782	ENSCHIG00000016303	FBH1	73	51.229	Capra_hircus
ENSAMXG00000020772	fbxo18	99	44.399	ENSCPOG00000010580	FBH1	71	49.283	Cavia_porcellus
ENSAMXG00000020772	fbxo18	99	46.469	ENSCCAG00000023218	FBH1	78	50.570	Cebus_capucinus
ENSAMXG00000020772	fbxo18	99	40.942	ENSCATG00000035430	FBH1	74	55.409	Cercocebus_atys
ENSAMXG00000020772	fbxo18	99	45.863	ENSCLAG00000008089	FBH1	72	51.421	Chinchilla_lanigera
ENSAMXG00000020772	fbxo18	80	51.216	ENSCSAG00000013644	FBH1	77	51.684	Chlorocebus_sabaeus
ENSAMXG00000020772	fbxo18	99	45.361	ENSCPBG00000019260	FBH1	89	44.696	Chrysemys_picta_bellii
ENSAMXG00000020772	fbxo18	99	45.714	ENSCANG00000023461	FBH1	78	50.570	Colobus_angolensis_palliatus
ENSAMXG00000020772	fbxo18	99	46.341	ENSCGRG00001018795	Fbh1	90	45.612	Cricetulus_griseus_chok1gshd
ENSAMXG00000020772	fbxo18	99	46.341	ENSCGRG00000008471	Fbh1	90	45.612	Cricetulus_griseus_crigri
ENSAMXG00000020772	fbxo18	78	47.569	ENSCSEG00000018212	fbxo18	78	47.900	Cynoglossus_semilaevis
ENSAMXG00000020772	fbxo18	91	46.333	ENSCVAG00000006828	fbxo18	99	46.556	Cyprinodon_variegatus
ENSAMXG00000020772	fbxo18	99	64.398	ENSDARG00000062983	fbxo18	89	64.974	Danio_rerio
ENSAMXG00000020772	fbxo18	99	46.115	ENSETEG00000019856	FBH1	72	51.876	Echinops_telfairi
ENSAMXG00000020772	fbxo18	99	45.723	ENSEASG00005019192	FBH1	90	45.352	Equus_asinus_asinus
ENSAMXG00000020772	fbxo18	99	45.621	ENSECAG00000006839	FBH1	90	45.148	Equus_caballus
ENSAMXG00000020772	fbxo18	83	52.589	ENSEEUG00000000461	FBH1	67	55.738	Erinaceus_europaeus
ENSAMXG00000020772	fbxo18	98	60.345	ENSELUG00000006556	fbxo18	89	60.345	Esox_lucius
ENSAMXG00000020772	fbxo18	99	45.770	ENSFCAG00000009004	FBH1	88	45.455	Felis_catus
ENSAMXG00000020772	fbxo18	99	45.408	ENSFDAG00000009830	FBH1	90	44.694	Fukomys_damarensis
ENSAMXG00000020772	fbxo18	99	48.374	ENSFHEG00000007533	fbxo18	90	48.156	Fundulus_heteroclitus
ENSAMXG00000020772	fbxo18	89	51.938	ENSGMOG00000010594	-	82	51.938	Gadus_morhua
ENSAMXG00000020772	fbxo18	99	44.614	ENSGALG00000008162	FBH1	92	44.707	Gallus_gallus
ENSAMXG00000020772	fbxo18	98	48.095	ENSGAFG00000004166	fbxo18	93	48.095	Gambusia_affinis
ENSAMXG00000020772	fbxo18	98	47.796	ENSGACG00000019171	fbxo18	71	54.545	Gasterosteus_aculeatus
ENSAMXG00000020772	fbxo18	99	46.392	ENSGAGG00000021773	FBH1	89	45.988	Gopherus_agassizii
ENSAMXG00000020772	fbxo18	99	46.075	ENSGGOG00000013326	FBXO18	78	50.569	Gorilla_gorilla
ENSAMXG00000020772	fbxo18	87	51.865	ENSHBUG00000016673	fbxo18	71	55.369	Haplochromis_burtoni
ENSAMXG00000020772	fbxo18	99	45.464	ENSHGLG00000015581	FBXO18	90	45.659	Heterocephalus_glaber_female
ENSAMXG00000020772	fbxo18	99	45.464	ENSHGLG00100009896	FBXO18	90	45.659	Heterocephalus_glaber_male
ENSAMXG00000020772	fbxo18	64	51.596	ENSHCOG00000010937	-	75	51.064	Hippocampus_comes
ENSAMXG00000020772	fbxo18	99	71.188	ENSIPUG00000019144	fbxo18	96	70.768	Ictalurus_punctatus
ENSAMXG00000020772	fbxo18	99	46.447	ENSSTOG00000006496	FBH1	72	52.010	Ictidomys_tridecemlineatus
ENSAMXG00000020772	fbxo18	99	47.379	ENSKMAG00000021437	fbxo18	87	47.395	Kryptolebias_marmoratus
ENSAMXG00000020772	fbxo18	98	49.209	ENSLBEG00000023717	fbxo18	71	56.454	Labrus_bergylta
ENSAMXG00000020772	fbxo18	84	39.448	ENSLACG00000013504	FBH1	77	43.760	Latimeria_chalumnae
ENSAMXG00000020772	fbxo18	99	55.010	ENSLOCG00000015655	fbxo18	90	54.906	Lepisosteus_oculatus
ENSAMXG00000020772	fbxo18	99	46.436	ENSLAFG00000013105	FBH1	90	45.965	Loxodonta_africana
ENSAMXG00000020772	fbxo18	99	46.272	ENSMMUG00000015143	FBH1	78	50.886	Macaca_mulatta
ENSAMXG00000020772	fbxo18	99	46.366	ENSMNEG00000043475	FBH1	78	50.824	Macaca_nemestrina
ENSAMXG00000020772	fbxo18	99	45.761	ENSMLEG00000035307	FBH1	78	50.570	Mandrillus_leucophaeus
ENSAMXG00000020772	fbxo18	88	52.028	ENSMAMG00000000527	fbxo18	71	55.212	Mastacembelus_armatus
ENSAMXG00000020772	fbxo18	87	51.865	ENSMZEG00005015202	fbxo18	71	55.369	Maylandia_zebra
ENSAMXG00000020772	fbxo18	99	45.233	ENSMGAG00000003231	FBH1	99	44.821	Meleagris_gallopavo
ENSAMXG00000020772	fbxo18	99	45.855	ENSMICG00000009646	FBH1	93	45.431	Microcebus_murinus
ENSAMXG00000020772	fbxo18	98	48.798	ENSMMOG00000010268	fbxo18	89	53.158	Mola_mola
ENSAMXG00000020772	fbxo18	81	50.765	ENSMODG00000018516	FBH1	78	51.105	Monodelphis_domestica
ENSAMXG00000020772	fbxo18	98	49.306	ENSMALG00000010440	fbxo18	90	48.423	Monopterus_albus
ENSAMXG00000020772	fbxo18	99	46.564	MGP_CAROLIEiJ_G0023178	Fbh1	72	52.005	Mus_caroli
ENSAMXG00000020772	fbxo18	99	46.769	ENSMUSG00000058594	Fbh1	90	45.740	Mus_musculus
ENSAMXG00000020772	fbxo18	99	46.769	MGP_PahariEiJ_G0019237	Fbh1	72	52.135	Mus_pahari
ENSAMXG00000020772	fbxo18	99	46.769	MGP_SPRETEiJ_G0024095	Fbh1	90	45.740	Mus_spretus
ENSAMXG00000020772	fbxo18	99	45.659	ENSMPUG00000016343	FBH1	90	45.297	Mustela_putorius_furo
ENSAMXG00000020772	fbxo18	99	43.438	ENSMLUG00000000133	FBH1	90	42.930	Myotis_lucifugus
ENSAMXG00000020772	fbxo18	98	48.854	ENSNBRG00000018212	fbxo18	88	52.202	Neolamprologus_brichardi
ENSAMXG00000020772	fbxo18	99	45.880	ENSNLEG00000011537	FBH1	78	50.441	Nomascus_leucogenys
ENSAMXG00000020772	fbxo18	99	44.444	ENSOPRG00000002898	FBH1	70	49.806	Ochotona_princeps
ENSAMXG00000020772	fbxo18	99	45.893	ENSODEG00000004201	FBH1	90	45.445	Octodon_degus
ENSAMXG00000020772	fbxo18	87	51.636	ENSONIG00000011830	fbxo18	87	54.915	Oreochromis_niloticus
ENSAMXG00000020772	fbxo18	99	44.615	ENSOANG00000015459	FBH1	75	50.130	Ornithorhynchus_anatinus
ENSAMXG00000020772	fbxo18	99	45.935	ENSOCUG00000006237	FBH1	72	50.900	Oryctolagus_cuniculus
ENSAMXG00000020772	fbxo18	100	46.951	ENSORLG00000026493	fbxo18	72	53.530	Oryzias_latipes
ENSAMXG00000020772	fbxo18	92	49.554	ENSORLG00020004678	fbxo18	72	53.402	Oryzias_latipes_hni
ENSAMXG00000020772	fbxo18	99	48.012	ENSOMEG00000011975	fbxo18	84	53.299	Oryzias_melastigma
ENSAMXG00000020772	fbxo18	99	46.051	ENSOGAG00000015682	FBH1	72	52.073	Otolemur_garnettii
ENSAMXG00000020772	fbxo18	99	45.668	ENSOARG00000012605	FBH1	90	45.250	Ovis_aries
ENSAMXG00000020772	fbxo18	99	46.075	ENSPPAG00000043946	FBH1	78	50.441	Pan_paniscus
ENSAMXG00000020772	fbxo18	99	45.863	ENSPPRG00000009687	FBH1	70	51.617	Panthera_pardus
ENSAMXG00000020772	fbxo18	99	45.863	ENSPTIG00000020396	FBH1	77	51.617	Panthera_tigris_altaica
ENSAMXG00000020772	fbxo18	99	46.029	ENSPTRG00000002261	FBH1	78	50.441	Pan_troglodytes
ENSAMXG00000020772	fbxo18	99	45.761	ENSPANG00000023427	FBH1	77	51.948	Papio_anubis
ENSAMXG00000020772	fbxo18	99	54.816	ENSPKIG00000025529	fbxo18	90	54.508	Paramormyrops_kingsleyae
ENSAMXG00000020772	fbxo18	99	44.796	ENSPSIG00000013802	FBH1	90	44.524	Pelodiscus_sinensis
ENSAMXG00000020772	fbxo18	99	46.209	ENSPEMG00000023309	Fbh1	72	52.005	Peromyscus_maniculatus_bairdii
ENSAMXG00000020772	fbxo18	99	44.559	ENSPCIG00000023460	FBH1	90	43.827	Phascolarctos_cinereus
ENSAMXG00000020772	fbxo18	98	48.255	ENSPFOG00000005889	fbxo18	89	48.099	Poecilia_formosa
ENSAMXG00000020772	fbxo18	98	47.996	ENSPLAG00000014934	fbxo18	89	48.045	Poecilia_latipinna
ENSAMXG00000020772	fbxo18	98	48.255	ENSPMEG00000021117	fbxo18	89	47.992	Poecilia_mexicana
ENSAMXG00000020772	fbxo18	65	51.703	ENSPREG00000017674	fbxo18	72	51.703	Poecilia_reticulata
ENSAMXG00000020772	fbxo18	99	46.115	ENSPPYG00000002064	FBH1	93	45.808	Pongo_abelii
ENSAMXG00000020772	fbxo18	99	42.492	ENSPCAG00000013584	FBH1	86	41.879	Procavia_capensis
ENSAMXG00000020772	fbxo18	99	44.648	ENSPCOG00000011617	FBH1	86	44.331	Propithecus_coquereli
ENSAMXG00000020772	fbxo18	99	45.096	ENSPVAG00000007082	FBH1	70	50.973	Pteropus_vampyrus
ENSAMXG00000020772	fbxo18	77	66.154	ENSPNYG00000015327	fbxo18	82	66.154	Pundamilia_nyererei
ENSAMXG00000020772	fbxo18	99	77.894	ENSPNAG00000008968	fbxo18	90	77.998	Pygocentrus_nattereri
ENSAMXG00000020772	fbxo18	77	45.515	ENSPNAG00000001339	-	85	45.515	Pygocentrus_nattereri
ENSAMXG00000020772	fbxo18	99	46.414	ENSRNOG00000018549	Fbh1	72	52.264	Rattus_norvegicus
ENSAMXG00000020772	fbxo18	99	45.855	ENSRBIG00000038238	FBH1	78	50.697	Rhinopithecus_bieti
ENSAMXG00000020772	fbxo18	99	45.761	ENSRROG00000029282	FBH1	77	51.813	Rhinopithecus_roxellana
ENSAMXG00000020772	fbxo18	99	45.825	ENSSBOG00000026129	FBH1	77	51.684	Saimiri_boliviensis_boliviensis
ENSAMXG00000020772	fbxo18	99	43.354	ENSSHAG00000009789	FBH1	73	49.418	Sarcophilus_harrisii
ENSAMXG00000020772	fbxo18	99	55.943	ENSSFOG00015023855	fbxo18	89	55.282	Scleropages_formosus
ENSAMXG00000020772	fbxo18	94	49.946	ENSSMAG00000012330	fbxo18	77	54.915	Scophthalmus_maximus
ENSAMXG00000020772	fbxo18	98	49.537	ENSSDUG00000014911	fbxo18	95	49.013	Seriola_dumerili
ENSAMXG00000020772	fbxo18	98	46.688	ENSSLDG00000014394	fbxo18	92	46.162	Seriola_lalandi_dorsalis
ENSAMXG00000020772	fbxo18	89	51.190	ENSSPUG00000001370	FBH1	87	51.190	Sphenodon_punctatus
ENSAMXG00000020772	fbxo18	87	52.742	ENSSPAG00000002282	fbxo18	90	50.203	Stegastes_partitus
ENSAMXG00000020772	fbxo18	92	54.301	ENSSSCG00000030030	FBH1	72	51.688	Sus_scrofa
ENSAMXG00000020772	fbxo18	79	50.193	ENSTNIG00000006893	fbxo18	89	50.260	Tetraodon_nigroviridis
ENSAMXG00000020772	fbxo18	95	46.467	ENSTBEG00000003595	FBH1	83	46.146	Tupaia_belangeri
ENSAMXG00000020772	fbxo18	99	44.186	ENSTTRG00000001338	FBH1	70	49.612	Tursiops_truncatus
ENSAMXG00000020772	fbxo18	99	45.965	ENSUAMG00000007277	FBH1	90	45.557	Ursus_americanus
ENSAMXG00000020772	fbxo18	83	50.309	ENSUMAG00000012189	FBH1	77	51.488	Ursus_maritimus
ENSAMXG00000020772	fbxo18	99	45.752	ENSVVUG00000006823	FBH1	77	51.617	Vulpes_vulpes
ENSAMXG00000020772	fbxo18	99	44.176	ENSXETG00000018125	fbh1	90	43.652	Xenopus_tropicalis
ENSAMXG00000020772	fbxo18	98	47.516	ENSXMAG00000019200	fbxo18	89	47.678	Xiphophorus_maculatus