EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020853 (Gene tree)
Gene ID: 103025913
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA-binding protein 12B-B
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1824 bases
Position: chr3:6169183-6171006
Accession: 103025913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021469	RRM_1	PF00076.22	6.8e-18	1	2
ENSAMXP00000021469	RRM_1	PF00076.22	6.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021469	-	1824	XM_007229447	ENSAMXP00000021469	607 (aa)	XP_007229509	W5LNQ7

Gene Model

Click here to download ENSAMXG00000020853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020853	zgc:153215	70	53.933	ENSAMXG00000041973	rbm12b	66	51.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020853	zgc:153215	68	56.977	ENSG00000183808	RBM12B	98	58.750	Homo_sapiens
ENSAMXG00000020853	zgc:153215	68	59.459	ENSAPOG00000008836	zgc:153215	92	59.459	Acanthochromis_polyacanthus
ENSAMXG00000020853	zgc:153215	78	45.161	ENSAPOG00000013963	rbm12b	74	50.505	Acanthochromis_polyacanthus
ENSAMXG00000020853	zgc:153215	71	58.025	ENSACIG00000013317	zgc:153215	86	58.025	Amphilophus_citrinellus
ENSAMXG00000020853	zgc:153215	75	57.143	ENSACIG00000014943	rbm12b	97	57.143	Amphilophus_citrinellus
ENSAMXG00000020853	zgc:153215	83	39.873	ENSAOCG00000024270	rbm12b	74	55.952	Amphiprion_ocellaris
ENSAMXG00000020853	zgc:153215	68	58.442	ENSAOCG00000010819	zgc:153215	88	58.242	Amphiprion_ocellaris
ENSAMXG00000020853	zgc:153215	80	39.873	ENSAPEG00000022079	rbm12b	99	55.952	Amphiprion_percula
ENSAMXG00000020853	zgc:153215	84	39.785	ENSATEG00000001886	zgc:153215	93	39.837	Anabas_testudineus
ENSAMXG00000020853	zgc:153215	70	58.333	ENSATEG00000004578	rbm12b	74	58.333	Anabas_testudineus
ENSAMXG00000020853	zgc:153215	70	52.083	ENSAPLG00000002020	RBM12B	73	52.083	Anas_platyrhynchos
ENSAMXG00000020853	zgc:153215	99	34.202	ENSACLG00000007675	zgc:153215	84	51.613	Astatotilapia_calliptera
ENSAMXG00000020853	zgc:153215	69	57.143	ENSACLG00000005575	rbm12b	64	57.143	Astatotilapia_calliptera
ENSAMXG00000020853	zgc:153215	72	49.138	ENSCHIG00000006790	RBM12B	58	56.977	Capra_hircus
ENSAMXG00000020853	zgc:153215	70	51.042	ENSCPBG00000003061	RBM12B	62	51.042	Chrysemys_picta_bellii
ENSAMXG00000020853	zgc:153215	69	56.579	ENSCSEG00000001575	-	99	56.579	Cynoglossus_semilaevis
ENSAMXG00000020853	zgc:153215	78	46.552	ENSCSEG00000004610	rbm12b	71	54.762	Cynoglossus_semilaevis
ENSAMXG00000020853	zgc:153215	73	50.000	ENSCVAG00000009259	-	94	50.000	Cyprinodon_variegatus
ENSAMXG00000020853	zgc:153215	73	55.952	ENSDARG00000079717	rbm12b	69	55.952	Danio_rerio
ENSAMXG00000020853	zgc:153215	99	41.845	ENSDARG00000055889	zgc:153215	99	41.845	Danio_rerio
ENSAMXG00000020853	zgc:153215	71	50.000	ENSETEG00000013005	-	56	54.651	Echinops_telfairi
ENSAMXG00000020853	zgc:153215	89	42.262	ENSELUG00000009039	zgc:153215	91	42.424	Esox_lucius
ENSAMXG00000020853	zgc:153215	70	51.042	ENSFALG00000014893	RBM12B	72	51.042	Ficedula_albicollis
ENSAMXG00000020853	zgc:153215	70	51.190	ENSFHEG00000016425	rbm12b	66	51.190	Fundulus_heteroclitus
ENSAMXG00000020853	zgc:153215	68	52.174	ENSFHEG00000014539	zgc:153215	90	52.174	Fundulus_heteroclitus
ENSAMXG00000020853	zgc:153215	69	54.762	ENSGMOG00000013467	rbm12b	74	54.762	Gadus_morhua
ENSAMXG00000020853	zgc:153215	70	51.042	ENSGALG00000035129	RBM12B	61	51.042	Gallus_gallus
ENSAMXG00000020853	zgc:153215	75	45.133	ENSGAFG00000007224	rbm12b	74	53.933	Gambusia_affinis
ENSAMXG00000020853	zgc:153215	71	52.688	ENSGAFG00000007845	zgc:153215	83	52.688	Gambusia_affinis
ENSAMXG00000020853	zgc:153215	78	46.774	ENSGACG00000008682	rbm12b	73	58.333	Gasterosteus_aculeatus
ENSAMXG00000020853	zgc:153215	70	51.042	ENSGAGG00000009774	RBM12B	62	51.042	Gopherus_agassizii
ENSAMXG00000020853	zgc:153215	99	34.429	ENSHBUG00000016150	zgc:153215	80	51.613	Haplochromis_burtoni
ENSAMXG00000020853	zgc:153215	69	55.952	ENSHBUG00000016227	rbm12b	64	55.952	Haplochromis_burtoni
ENSAMXG00000020853	zgc:153215	76	46.364	ENSHCOG00000014952	rbm12b	78	54.762	Hippocampus_comes
ENSAMXG00000020853	zgc:153215	99	43.987	ENSIPUG00000019731	zgc:153215	99	42.669	Ictalurus_punctatus
ENSAMXG00000020853	zgc:153215	72	51.304	ENSJJAG00000004165	-	50	51.852	Jaculus_jaculus
ENSAMXG00000020853	zgc:153215	70	52.174	ENSKMAG00000004958	zgc:153215	92	52.174	Kryptolebias_marmoratus
ENSAMXG00000020853	zgc:153215	68	57.143	ENSKMAG00000013704	rbm12b	72	57.143	Kryptolebias_marmoratus
ENSAMXG00000020853	zgc:153215	68	59.524	ENSKMAG00000013715	rbm12b	74	59.524	Kryptolebias_marmoratus
ENSAMXG00000020853	zgc:153215	72	56.250	ENSLBEG00000002597	zgc:153215	87	54.444	Labrus_bergylta
ENSAMXG00000020853	zgc:153215	69	55.056	ENSLACG00000007177	RBM12B	74	55.056	Latimeria_chalumnae
ENSAMXG00000020853	zgc:153215	73	46.957	ENSLOCG00000018344	rbm12b	65	52.688	Lepisosteus_oculatus
ENSAMXG00000020853	zgc:153215	70	55.814	ENSLAFG00000029949	RBM12B	53	52.000	Loxodonta_africana
ENSAMXG00000020853	zgc:153215	83	43.787	ENSMAMG00000012038	zgc:153215	93	39.773	Mastacembelus_armatus
ENSAMXG00000020853	zgc:153215	89	41.772	ENSMAMG00000011998	rbm12b	74	58.333	Mastacembelus_armatus
ENSAMXG00000020853	zgc:153215	69	55.952	ENSMZEG00005014845	rbm12b	64	55.952	Maylandia_zebra
ENSAMXG00000020853	zgc:153215	99	34.429	ENSMZEG00005005435	zgc:153215	95	38.043	Maylandia_zebra
ENSAMXG00000020853	zgc:153215	69	57.143	ENSMZEG00005015005	rbm12b	66	57.143	Maylandia_zebra
ENSAMXG00000020853	zgc:153215	70	51.042	ENSMGAG00000011985	RBM12B	83	51.042	Meleagris_gallopavo
ENSAMXG00000020853	zgc:153215	70	58.140	ENSMAUG00000021752	-	51	58.140	Mesocricetus_auratus
ENSAMXG00000020853	zgc:153215	68	56.977	ENSMOCG00000005603	-	50	54.255	Microtus_ochrogaster
ENSAMXG00000020853	zgc:153215	70	51.064	ENSMMOG00000002404	rbm12b	69	51.064	Mola_mola
ENSAMXG00000020853	zgc:153215	63	59.259	ENSMMOG00000003372	zgc:153215	89	55.914	Mola_mola
ENSAMXG00000020853	zgc:153215	72	52.083	ENSMODG00000007436	RBM12B	58	52.083	Monodelphis_domestica
ENSAMXG00000020853	zgc:153215	71	54.839	ENSMALG00000001222	zgc:153215	90	54.839	Monopterus_albus
ENSAMXG00000020853	zgc:153215	71	57.143	ENSMALG00000012059	rbm12b	66	57.143	Monopterus_albus
ENSAMXG00000020853	zgc:153215	68	56.977	ENSMUSG00000052137	Rbm12b2	50	56.977	Mus_musculus
ENSAMXG00000020853	zgc:153215	68	56.977	ENSMUSG00000046667	Rbm12b1	50	56.977	Mus_musculus
ENSAMXG00000020853	zgc:153215	68	56.977	MGP_SPRETEiJ_G0026766	-	50	56.977	Mus_spretus
ENSAMXG00000020853	zgc:153215	99	33.643	ENSNBRG00000013644	zgc:153215	95	38.649	Neolamprologus_brichardi
ENSAMXG00000020853	zgc:153215	73	47.321	ENSNBRG00000015057	rbm12b	66	57.143	Neolamprologus_brichardi
ENSAMXG00000020853	zgc:153215	69	58.333	ENSONIG00000020612	rbm12b	66	58.333	Oreochromis_niloticus
ENSAMXG00000020853	zgc:153215	88	37.903	ENSONIG00000006054	zgc:153215	84	52.747	Oreochromis_niloticus
ENSAMXG00000020853	zgc:153215	71	50.000	ENSOANG00000015735	-	62	50.000	Ornithorhynchus_anatinus
ENSAMXG00000020853	zgc:153215	73	51.429	ENSORLG00000008228	rbm12b	72	51.429	Oryzias_latipes
ENSAMXG00000020853	zgc:153215	73	51.429	ENSORLG00020013619	rbm12b	72	51.429	Oryzias_latipes_hni
ENSAMXG00000020853	zgc:153215	73	51.429	ENSORLG00015019999	rbm12b	72	51.429	Oryzias_latipes_hsok
ENSAMXG00000020853	zgc:153215	68	53.659	ENSOMEG00000004220	zgc:153215	90	52.222	Oryzias_melastigma
ENSAMXG00000020853	zgc:153215	69	55.952	ENSOMEG00000022523	rbm12b	72	55.952	Oryzias_melastigma
ENSAMXG00000020853	zgc:153215	69	53.763	ENSPKIG00000018719	rbm12b	63	53.763	Paramormyrops_kingsleyae
ENSAMXG00000020853	zgc:153215	72	63.043	ENSPKIG00000014851	zgc:153215	85	63.043	Paramormyrops_kingsleyae
ENSAMXG00000020853	zgc:153215	70	50.000	ENSPSIG00000001348	RBM12B	62	50.000	Pelodiscus_sinensis
ENSAMXG00000020853	zgc:153215	70	58.140	ENSPEMG00000008279	-	50	58.140	Peromyscus_maniculatus_bairdii
ENSAMXG00000020853	zgc:153215	72	52.083	ENSPCIG00000008556	RBM12B	59	52.083	Phascolarctos_cinereus
ENSAMXG00000020853	zgc:153215	78	45.133	ENSPFOG00000020937	rbm12b	71	53.933	Poecilia_formosa
ENSAMXG00000020853	zgc:153215	70	51.613	ENSPFOG00000017451	zgc:153215	68	51.613	Poecilia_formosa
ENSAMXG00000020853	zgc:153215	66	59.155	ENSPLAG00000000232	zgc:153215	91	59.155	Poecilia_latipinna
ENSAMXG00000020853	zgc:153215	78	45.133	ENSPLAG00000018782	rbm12b	74	53.933	Poecilia_latipinna
ENSAMXG00000020853	zgc:153215	68	55.696	ENSPMEG00000016662	zgc:153215	93	55.696	Poecilia_mexicana
ENSAMXG00000020853	zgc:153215	75	45.133	ENSPMEG00000011418	rbm12b	74	53.933	Poecilia_mexicana
ENSAMXG00000020853	zgc:153215	70	50.538	ENSPREG00000018608	zgc:153215	86	50.538	Poecilia_reticulata
ENSAMXG00000020853	zgc:153215	69	57.143	ENSPNYG00000016696	rbm12b	66	57.143	Pundamilia_nyererei
ENSAMXG00000020853	zgc:153215	71	52.747	ENSPNYG00000018125	zgc:153215	97	52.747	Pundamilia_nyererei
ENSAMXG00000020853	zgc:153215	100	60.791	ENSPNAG00000025628	zgc:153215	100	58.949	Pygocentrus_nattereri
ENSAMXG00000020853	zgc:153215	69	57.143	ENSPNAG00000008126	rbm12b	61	57.143	Pygocentrus_nattereri
ENSAMXG00000020853	zgc:153215	68	53.488	ENSRNOG00000055292	LOC679087	56	53.488	Rattus_norvegicus
ENSAMXG00000020853	zgc:153215	68	56.977	ENSRBIG00000035046	RBM12B	54	56.977	Rhinopithecus_bieti
ENSAMXG00000020853	zgc:153215	72	52.083	ENSSHAG00000015335	RBM12B	59	52.083	Sarcophilus_harrisii
ENSAMXG00000020853	zgc:153215	70	51.613	ENSSFOG00015001584	rbm12b	65	51.613	Scleropages_formosus
ENSAMXG00000020853	zgc:153215	72	59.551	ENSSFOG00015009427	zgc:153215	83	59.551	Scleropages_formosus
ENSAMXG00000020853	zgc:153215	70	57.143	ENSSMAG00000019013	zgc:153215	87	57.143	Scophthalmus_maximus
ENSAMXG00000020853	zgc:153215	71	54.762	ENSSMAG00000019708	rbm12b	74	54.762	Scophthalmus_maximus
ENSAMXG00000020853	zgc:153215	78	47.581	ENSSDUG00000006856	rbm12b	74	58.333	Seriola_dumerili
ENSAMXG00000020853	zgc:153215	68	55.556	ENSSDUG00000012545	zgc:153215	88	52.688	Seriola_dumerili
ENSAMXG00000020853	zgc:153215	83	39.142	ENSSLDG00000013581	zgc:153215	92	39.237	Seriola_lalandi_dorsalis
ENSAMXG00000020853	zgc:153215	76	47.788	ENSSLDG00000016156	rbm12b	74	58.333	Seriola_lalandi_dorsalis
ENSAMXG00000020853	zgc:153215	70	54.651	ENSSARG00000011845	-	58	54.651	Sorex_araneus
ENSAMXG00000020853	zgc:153215	69	49.438	ENSSPUG00000016954	RBM12B	75	49.438	Sphenodon_punctatus
ENSAMXG00000020853	zgc:153215	70	54.839	ENSSPAG00000023584	zgc:153215	93	54.839	Stegastes_partitus
ENSAMXG00000020853	zgc:153215	80	40.764	ENSSPAG00000006774	rbm12b	74	49.495	Stegastes_partitus
ENSAMXG00000020853	zgc:153215	71	50.000	ENSTGUG00000011860	RBM12B	95	50.000	Taeniopygia_guttata
ENSAMXG00000020853	zgc:153215	69	54.762	ENSTRUG00000013738	rbm12b	67	54.762	Takifugu_rubripes
ENSAMXG00000020853	zgc:153215	52	53.947	ENSTNIG00000018374	-	84	49.451	Tetraodon_nigroviridis
ENSAMXG00000020853	zgc:153215	68	55.814	ENSTBEG00000000449	RBM12B	53	55.814	Tupaia_belangeri
ENSAMXG00000020853	zgc:153215	71	54.255	ENSXETG00000014694	rbm12b	96	54.255	Xenopus_tropicalis
ENSAMXG00000020853	zgc:153215	68	50.000	ENSXETG00000014696	rbm12b	68	50.000	Xenopus_tropicalis
ENSAMXG00000020853	zgc:153215	83	32.110	ENSXETG00000025920	-	92	34.831	Xenopus_tropicalis
ENSAMXG00000020853	zgc:153215	76	53.333	ENSXCOG00000019654	zgc:153215	84	53.333	Xiphophorus_couchianus
ENSAMXG00000020853	zgc:153215	75	45.133	ENSXMAG00000014213	rbm12b	74	53.933	Xiphophorus_maculatus
ENSAMXG00000020853	zgc:153215	56	55.738	ENSXMAG00000013169	-	82	55.738	Xiphophorus_maculatus