EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020880 (Gene tree)
Gene ID: 103035717
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 9329 bases
Position: chr22:30847097-30856425
Accession: 103035717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021493	GN3L_Grn1	PF08701.11	3.4e-19	1	1
ENSAMXP00000021493	MMR_HSR1	PF01926.23	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021493	-	2048	XM_022682784	ENSAMXP00000021493	562 (aa)	XP_022538505	W5LNT1

Gene Model

Click here to download ENSAMXG00000020880's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020880	gnl3	72	38.107	ENSAMXG00000006376	gnl3l	73	36.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020880	gnl3	100	44.444	ENSG00000163938	GNL3	100	52.518	Homo_sapiens
ENSAMXG00000020880	gnl3	99	54.073	ENSAPOG00000004048	gnl3	99	54.482	Acanthochromis_polyacanthus
ENSAMXG00000020880	gnl3	100	42.451	ENSAMEG00000008456	GNL3	100	42.451	Ailuropoda_melanoleuca
ENSAMXG00000020880	gnl3	99	52.305	ENSACIG00000000545	gnl3	99	52.128	Amphilophus_citrinellus
ENSAMXG00000020880	gnl3	99	53.899	ENSAOCG00000012879	gnl3	99	54.130	Amphiprion_ocellaris
ENSAMXG00000020880	gnl3	99	54.419	ENSAPEG00000006146	gnl3	99	55.009	Amphiprion_percula
ENSAMXG00000020880	gnl3	99	54.159	ENSATEG00000024242	gnl3	99	55.300	Anabas_testudineus
ENSAMXG00000020880	gnl3	96	45.155	ENSAPLG00000005171	GNL3	100	44.790	Anas_platyrhynchos
ENSAMXG00000020880	gnl3	100	47.387	ENSACAG00000007357	GNL3	100	46.713	Anolis_carolinensis
ENSAMXG00000020880	gnl3	100	44.599	ENSANAG00000033209	GNL3	85	47.569	Aotus_nancymaae
ENSAMXG00000020880	gnl3	99	53.014	ENSACLG00000007381	gnl3	99	52.281	Astatotilapia_calliptera
ENSAMXG00000020880	gnl3	100	43.608	ENSBTAG00000014549	GNL3	100	44.288	Bos_taurus
ENSAMXG00000020880	gnl3	100	43.386	ENSCJAG00000006864	-	100	42.883	Callithrix_jacchus
ENSAMXG00000020880	gnl3	100	43.386	ENSCJAG00000044256	-	86	46.512	Callithrix_jacchus
ENSAMXG00000020880	gnl3	100	43.162	ENSCAFG00000009004	GNL3	100	43.540	Canis_familiaris
ENSAMXG00000020880	gnl3	88	46.667	ENSCAFG00020002613	GNL3	90	46.875	Canis_lupus_dingo
ENSAMXG00000020880	gnl3	100	44.386	ENSCHIG00000022181	GNL3	100	44.170	Capra_hircus
ENSAMXG00000020880	gnl3	100	43.186	ENSTSYG00000006851	GNL3	86	46.296	Carlito_syrichta
ENSAMXG00000020880	gnl3	88	45.161	ENSCPOG00000000282	GNL3	88	45.228	Cavia_porcellus
ENSAMXG00000020880	gnl3	100	44.621	ENSCCAG00000033281	GNL3	87	47.280	Cebus_capucinus
ENSAMXG00000020880	gnl3	100	44.149	ENSCATG00000040886	GNL3	100	43.772	Cercocebus_atys
ENSAMXG00000020880	gnl3	100	43.594	ENSCLAG00000010109	-	100	42.171	Chinchilla_lanigera
ENSAMXG00000020880	gnl3	100	44.425	ENSCSAG00000013315	GNL3	100	44.050	Chlorocebus_sabaeus
ENSAMXG00000020880	gnl3	100	42.783	ENSCHOG00000002726	GNL3	100	42.483	Choloepus_hoffmanni
ENSAMXG00000020880	gnl3	75	46.296	ENSCPBG00000018330	-	95	46.279	Chrysemys_picta_bellii
ENSAMXG00000020880	gnl3	98	43.297	ENSCANG00000039969	GNL3	84	46.421	Colobus_angolensis_palliatus
ENSAMXG00000020880	gnl3	100	43.363	ENSCGRG00001020950	Gnl3	100	43.380	Cricetulus_griseus_chok1gshd
ENSAMXG00000020880	gnl3	100	43.363	ENSCGRG00000015225	Gnl3	100	43.380	Cricetulus_griseus_crigri
ENSAMXG00000020880	gnl3	99	53.982	ENSCSEG00000005009	gnl3	100	52.910	Cynoglossus_semilaevis
ENSAMXG00000020880	gnl3	99	53.263	ENSCVAG00000010679	gnl3	99	52.557	Cyprinodon_variegatus
ENSAMXG00000020880	gnl3	100	60.105	ENSDARG00000006219	gnl3	100	60.211	Danio_rerio
ENSAMXG00000020880	gnl3	100	43.662	ENSDNOG00000001037	GNL3	100	43.486	Dasypus_novemcinctus
ENSAMXG00000020880	gnl3	100	43.794	ENSDORG00000000674	Gnl3	100	43.440	Dipodomys_ordii
ENSAMXG00000020880	gnl3	88	77.465	ENSETEG00000016534	-	74	77.465	Echinops_telfairi
ENSAMXG00000020880	gnl3	100	43.718	ENSEASG00005014636	GNL3	100	43.080	Equus_asinus_asinus
ENSAMXG00000020880	gnl3	100	43.652	ENSECAG00000014850	GNL3	100	43.007	Equus_caballus
ENSAMXG00000020880	gnl3	99	42.246	ENSEEUG00000004427	GNL3	86	45.397	Erinaceus_europaeus
ENSAMXG00000020880	gnl3	99	55.672	ENSELUG00000008767	gnl3	99	55.263	Esox_lucius
ENSAMXG00000020880	gnl3	100	43.210	ENSFCAG00000015719	GNL3	100	43.110	Felis_catus
ENSAMXG00000020880	gnl3	99	44.618	ENSFALG00000008957	GNL3	99	45.098	Ficedula_albicollis
ENSAMXG00000020880	gnl3	100	43.386	ENSFDAG00000020679	GNL3	88	46.888	Fukomys_damarensis
ENSAMXG00000020880	gnl3	99	53.004	ENSFHEG00000020897	gnl3	99	53.004	Fundulus_heteroclitus
ENSAMXG00000020880	gnl3	99	46.783	ENSGMOG00000001745	gnl3	99	47.069	Gadus_morhua
ENSAMXG00000020880	gnl3	100	45.172	ENSGALG00000001613	GNL3	100	44.464	Gallus_gallus
ENSAMXG00000020880	gnl3	99	46.154	ENSGAFG00000007184	gnl3	99	45.796	Gambusia_affinis
ENSAMXG00000020880	gnl3	99	49.645	ENSGACG00000000309	gnl3	99	49.823	Gasterosteus_aculeatus
ENSAMXG00000020880	gnl3	79	45.455	ENSGAGG00000021579	-	98	45.312	Gopherus_agassizii
ENSAMXG00000020880	gnl3	100	43.950	ENSGGOG00000011444	GNL3	85	47.780	Gorilla_gorilla
ENSAMXG00000020880	gnl3	99	53.901	ENSHBUG00000001340	gnl3	99	53.901	Haplochromis_burtoni
ENSAMXG00000020880	gnl3	99	43.316	ENSHGLG00000018299	GNL3	85	46.764	Heterocephalus_glaber_female
ENSAMXG00000020880	gnl3	99	47.811	ENSHCOG00000009446	gnl3	99	46.924	Hippocampus_comes
ENSAMXG00000020880	gnl3	99	63.441	ENSIPUG00000023677	gnl3	91	72.785	Ictalurus_punctatus
ENSAMXG00000020880	gnl3	100	44.306	ENSSTOG00000000356	GNL3	100	44.128	Ictidomys_tridecemlineatus
ENSAMXG00000020880	gnl3	99	45.098	ENSJJAG00000021993	Gnl3	100	43.694	Jaculus_jaculus
ENSAMXG00000020880	gnl3	99	53.097	ENSKMAG00000005965	gnl3	99	52.364	Kryptolebias_marmoratus
ENSAMXG00000020880	gnl3	99	52.482	ENSLBEG00000011394	gnl3	99	51.418	Labrus_bergylta
ENSAMXG00000020880	gnl3	99	47.909	ENSLACG00000001259	GNL3	99	48.776	Latimeria_chalumnae
ENSAMXG00000020880	gnl3	99	51.045	ENSLOCG00000010542	gnl3	99	52.128	Lepisosteus_oculatus
ENSAMXG00000020880	gnl3	100	42.857	ENSLAFG00000016056	GNL3	100	43.386	Loxodonta_africana
ENSAMXG00000020880	gnl3	100	44.504	ENSMFAG00000000613	GNL3	100	44.128	Macaca_fascicularis
ENSAMXG00000020880	gnl3	98	43.297	ENSMMUG00000012511	GNL3	100	43.091	Macaca_mulatta
ENSAMXG00000020880	gnl3	98	43.478	ENSMNEG00000041979	GNL3	100	43.091	Macaca_nemestrina
ENSAMXG00000020880	gnl3	100	44.504	ENSMLEG00000027696	GNL3	100	44.128	Mandrillus_leucophaeus
ENSAMXG00000020880	gnl3	99	56.206	ENSMAMG00000008904	gnl3	99	56.383	Mastacembelus_armatus
ENSAMXG00000020880	gnl3	99	54.255	ENSMZEG00005014857	gnl3	99	54.078	Maylandia_zebra
ENSAMXG00000020880	gnl3	85	52.058	ENSMZEG00005014957	-	94	52.263	Maylandia_zebra
ENSAMXG00000020880	gnl3	91	37.753	ENSMGAG00000000848	GNL3	80	41.336	Meleagris_gallopavo
ENSAMXG00000020880	gnl3	100	43.585	ENSMAUG00000020178	Gnl3	100	42.004	Mesocricetus_auratus
ENSAMXG00000020880	gnl3	100	44.014	ENSMICG00000016373	GNL3	100	44.014	Microcebus_murinus
ENSAMXG00000020880	gnl3	100	42.527	ENSMOCG00000018437	Gnl3	87	45.511	Microtus_ochrogaster
ENSAMXG00000020880	gnl3	99	49.823	ENSMMOG00000002815	gnl3	99	49.647	Mola_mola
ENSAMXG00000020880	gnl3	100	46.416	ENSMODG00000011257	GNL3	100	46.503	Monodelphis_domestica
ENSAMXG00000020880	gnl3	96	48.162	ENSMALG00000021043	gnl3	92	56.803	Monopterus_albus
ENSAMXG00000020880	gnl3	100	42.883	MGP_CAROLIEiJ_G0019063	Gnl3	100	42.349	Mus_caroli
ENSAMXG00000020880	gnl3	100	42.705	ENSMUSG00000042354	Gnl3	100	56.863	Mus_musculus
ENSAMXG00000020880	gnl3	100	43.950	MGP_PahariEiJ_G0030080	Gnl3	100	43.594	Mus_pahari
ENSAMXG00000020880	gnl3	100	42.527	MGP_SPRETEiJ_G0019948	Gnl3	100	42.004	Mus_spretus
ENSAMXG00000020880	gnl3	100	42.632	ENSMPUG00000016777	GNL3	100	42.606	Mustela_putorius_furo
ENSAMXG00000020880	gnl3	100	44.696	ENSMLUG00000000728	GNL3	100	42.857	Myotis_lucifugus
ENSAMXG00000020880	gnl3	100	42.349	ENSNGAG00000017202	Gnl3	100	41.563	Nannospalax_galili
ENSAMXG00000020880	gnl3	85	53.430	ENSNBRG00000013161	gnl3	97	53.112	Neolamprologus_brichardi
ENSAMXG00000020880	gnl3	100	44.092	ENSNLEG00000007173	GNL3	100	43.594	Nomascus_leucogenys
ENSAMXG00000020880	gnl3	99	35.484	ENSMEUG00000011502	-	87	40.471	Notamacropus_eugenii
ENSAMXG00000020880	gnl3	78	40.271	ENSOPRG00000009356	GNL3	96	39.907	Ochotona_princeps
ENSAMXG00000020880	gnl3	100	43.717	ENSODEG00000009492	GNL3	87	47.095	Octodon_degus
ENSAMXG00000020880	gnl3	99	54.497	ENSONIG00000019335	gnl3	99	53.723	Oreochromis_niloticus
ENSAMXG00000020880	gnl3	100	46.046	ENSOANG00000013437	GNL3	100	44.251	Ornithorhynchus_anatinus
ENSAMXG00000020880	gnl3	100	44.268	ENSOCUG00000009841	GNL3	100	43.056	Oryctolagus_cuniculus
ENSAMXG00000020880	gnl3	99	54.255	ENSORLG00000016030	gnl3	99	52.373	Oryzias_latipes
ENSAMXG00000020880	gnl3	99	54.433	ENSORLG00020014358	gnl3	99	52.548	Oryzias_latipes_hni
ENSAMXG00000020880	gnl3	99	54.078	ENSORLG00015009489	gnl3	99	52.373	Oryzias_latipes_hsok
ENSAMXG00000020880	gnl3	99	54.690	ENSOMEG00000005462	gnl3	99	53.274	Oryzias_melastigma
ENSAMXG00000020880	gnl3	100	44.444	ENSOGAG00000004101	GNL3	100	43.640	Otolemur_garnettii
ENSAMXG00000020880	gnl3	100	44.326	ENSOARG00000002470	GNL3	100	43.563	Ovis_aries
ENSAMXG00000020880	gnl3	100	44.268	ENSPPAG00000019253	GNL3	100	43.772	Pan_paniscus
ENSAMXG00000020880	gnl3	100	43.805	ENSPPRG00000009550	GNL3	100	43.531	Panthera_pardus
ENSAMXG00000020880	gnl3	100	43.630	ENSPTIG00000009356	GNL3	100	43.357	Panthera_tigris_altaica
ENSAMXG00000020880	gnl3	100	44.268	ENSPTRG00000015009	GNL3	100	43.772	Pan_troglodytes
ENSAMXG00000020880	gnl3	100	42.908	ENSPANG00000016579	GNL3	100	42.527	Papio_anubis
ENSAMXG00000020880	gnl3	99	54.930	ENSPKIG00000024295	gnl3	99	54.435	Paramormyrops_kingsleyae
ENSAMXG00000020880	gnl3	98	48.313	ENSPSIG00000011486	GNL3	100	48.490	Pelodiscus_sinensis
ENSAMXG00000020880	gnl3	85	55.789	ENSPMGG00000008210	gnl3	93	49.790	Periophthalmus_magnuspinnatus
ENSAMXG00000020880	gnl3	100	42.509	ENSPEMG00000017577	Gnl3	100	41.681	Peromyscus_maniculatus_bairdii
ENSAMXG00000020880	gnl3	99	45.614	ENSPCIG00000018642	GNL3	98	45.730	Phascolarctos_cinereus
ENSAMXG00000020880	gnl3	99	51.557	ENSPFOG00000017601	gnl3	99	50.429	Poecilia_formosa
ENSAMXG00000020880	gnl3	99	53.251	ENSPLAG00000016968	gnl3	99	53.014	Poecilia_latipinna
ENSAMXG00000020880	gnl3	99	51.878	ENSPMEG00000018775	gnl3	99	50.887	Poecilia_mexicana
ENSAMXG00000020880	gnl3	99	50.984	ENSPREG00000002909	gnl3	99	50.984	Poecilia_reticulata
ENSAMXG00000020880	gnl3	100	43.386	ENSPPYG00000013800	GNL3	100	42.883	Pongo_abelii
ENSAMXG00000020880	gnl3	80	47.778	ENSPCAG00000002006	GNL3	81	47.778	Procavia_capensis
ENSAMXG00000020880	gnl3	100	45.552	ENSPCOG00000026637	GNL3	100	45.293	Propithecus_coquereli
ENSAMXG00000020880	gnl3	100	45.455	ENSPVAG00000012586	GNL3	100	44.991	Pteropus_vampyrus
ENSAMXG00000020880	gnl3	89	50.579	ENSPNYG00000005130	gnl3	95	51.303	Pundamilia_nyererei
ENSAMXG00000020880	gnl3	100	70.495	ENSPNAG00000013096	gnl3	100	70.318	Pygocentrus_nattereri
ENSAMXG00000020880	gnl3	100	42.451	ENSRNOG00000028461	Gnl3	100	43.257	Rattus_norvegicus
ENSAMXG00000020880	gnl3	100	44.326	ENSRBIG00000031778	GNL3	100	43.950	Rhinopithecus_bieti
ENSAMXG00000020880	gnl3	100	44.326	ENSRROG00000030086	GNL3	100	43.950	Rhinopithecus_roxellana
ENSAMXG00000020880	gnl3	100	43.210	ENSSBOG00000019990	GNL3	85	46.934	Saimiri_boliviensis_boliviensis
ENSAMXG00000020880	gnl3	99	47.069	ENSSHAG00000006141	GNL3	99	47.227	Sarcophilus_harrisii
ENSAMXG00000020880	gnl3	99	52.381	ENSSFOG00015021228	gnl3	99	51.579	Scleropages_formosus
ENSAMXG00000020880	gnl3	99	55.142	ENSSMAG00000006662	gnl3	99	53.391	Scophthalmus_maximus
ENSAMXG00000020880	gnl3	99	54.145	ENSSDUG00000000972	gnl3	99	52.373	Seriola_dumerili
ENSAMXG00000020880	gnl3	99	54.225	ENSSLDG00000008692	gnl3	92	53.169	Seriola_lalandi_dorsalis
ENSAMXG00000020880	gnl3	89	43.539	ENSSARG00000002226	GNL3	87	44.397	Sorex_araneus
ENSAMXG00000020880	gnl3	100	46.816	ENSSPUG00000003582	GNL3	100	47.396	Sphenodon_punctatus
ENSAMXG00000020880	gnl3	99	55.360	ENSSPAG00000020180	gnl3	99	54.833	Stegastes_partitus
ENSAMXG00000020880	gnl3	100	43.894	ENSSSCG00000011449	GNL3	99	43.972	Sus_scrofa
ENSAMXG00000020880	gnl3	99	44.991	ENSTGUG00000005774	GNL3	100	44.700	Taeniopygia_guttata
ENSAMXG00000020880	gnl3	99	50.973	ENSTRUG00000005552	gnl3	99	49.735	Takifugu_rubripes
ENSAMXG00000020880	gnl3	99	50.000	ENSTNIG00000007263	gnl3	99	50.355	Tetraodon_nigroviridis
ENSAMXG00000020880	gnl3	97	41.622	ENSTBEG00000017518	GNL3	100	41.941	Tupaia_belangeri
ENSAMXG00000020880	gnl3	100	42.984	ENSUAMG00000012347	GNL3	100	42.984	Ursus_americanus
ENSAMXG00000020880	gnl3	100	42.984	ENSUMAG00000021001	GNL3	100	42.984	Ursus_maritimus
ENSAMXG00000020880	gnl3	99	42.679	ENSVVUG00000024536	-	99	42.679	Vulpes_vulpes
ENSAMXG00000020880	gnl3	88	50.203	ENSXCOG00000018425	gnl3	95	56.473	Xiphophorus_couchianus
ENSAMXG00000020880	gnl3	99	51.675	ENSXMAG00000022565	gnl3	99	52.482	Xiphophorus_maculatus