EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000020892 (Gene tree)
Gene ID: 103038610
Gene Symbol: -
Alias: -
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10914 bases
Position: chr16:6704488-6715401
Accession: 103038610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021508	DND1_DSRM	PF14709.7	7.2e-18	1	1
ENSAMXP00000021508	RRM_1	PF00076.22	8.1e-34	1	3
ENSAMXP00000021508	RRM_1	PF00076.22	8.1e-34	2	3
ENSAMXP00000021508	RRM_1	PF00076.22	8.1e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021508	-	1572	XM_022677898	ENSAMXP00000021508	523 (aa)	XP_022533619	W5LNU6

Gene Model

Click here to download ENSAMXG00000020892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000020892	-	58	52.273	ENSAMXG00000034257	syncrip	50	50.625
ENSAMXG00000020892	-	58	53.571	ENSAMXG00000030806	syncripl	61	51.077
ENSAMXG00000020892	-	59	63.754	ENSAMXG00000021794	rbm47	51	62.460
ENSAMXG00000020892	-	59	53.055	ENSAMXG00000020800	hnrnpr	50	50.629
ENSAMXG00000020892	-	88	73.043	ENSAMXG00000009397	rbm46	97	73.043
ENSAMXG00000020892	-	75	46.429	ENSAMXG00000018180	a1cf	82	44.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020892	-	99	60.681	ENSG00000151962	RBM46	83	86.486	Homo_sapiens
ENSAMXG00000020892	-	88	65.875	ENSAPOG00000009209	rbm46	89	65.875	Acanthochromis_polyacanthus
ENSAMXG00000020892	-	99	60.409	ENSAMEG00000013290	RBM46	96	60.409	Ailuropoda_melanoleuca
ENSAMXG00000020892	-	88	60.677	ENSACIG00000014500	rbm46	87	60.888	Amphilophus_citrinellus
ENSAMXG00000020892	-	88	65.359	ENSAOCG00000001892	-	99	61.049	Amphiprion_ocellaris
ENSAMXG00000020892	-	87	64.847	ENSAPEG00000017762	rbm46	96	64.847	Amphiprion_percula
ENSAMXG00000020892	-	98	60.000	ENSATEG00000010775	rbm46	95	59.245	Anabas_testudineus
ENSAMXG00000020892	-	87	62.931	ENSAPLG00000005116	RBM46	95	62.826	Anas_platyrhynchos
ENSAMXG00000020892	-	99	60.640	ENSACAG00000015599	RBM46	96	60.640	Anolis_carolinensis
ENSAMXG00000020892	-	99	61.290	ENSANAG00000029193	RBM46	95	64.425	Aotus_nancymaae
ENSAMXG00000020892	-	92	63.273	ENSACLG00000016153	rbm46	93	61.101	Astatotilapia_calliptera
ENSAMXG00000020892	-	99	60.935	ENSBTAG00000001696	RBM46	96	60.781	Bos_taurus
ENSAMXG00000020892	-	99	60.305	ENSCJAG00000001768	RBM46	95	63.478	Callithrix_jacchus
ENSAMXG00000020892	-	99	60.595	ENSCAFG00000008473	RBM46	96	60.595	Canis_familiaris
ENSAMXG00000020892	-	99	60.595	ENSCAFG00020002468	RBM46	96	60.595	Canis_lupus_dingo
ENSAMXG00000020892	-	99	61.007	ENSCHIG00000000502	RBM46	96	61.007	Capra_hircus
ENSAMXG00000020892	-	87	63.991	ENSTSYG00000010435	RBM46	95	63.913	Carlito_syrichta
ENSAMXG00000020892	-	87	62.607	ENSCAPG00000011928	-	92	62.907	Cavia_aperea
ENSAMXG00000020892	-	70	66.220	ENSCAPG00000011841	-	94	66.757	Cavia_aperea
ENSAMXG00000020892	-	99	58.427	ENSCPOG00000019272	-	96	58.427	Cavia_porcellus
ENSAMXG00000020892	-	95	60.835	ENSCPOG00000020396	-	95	60.835	Cavia_porcellus
ENSAMXG00000020892	-	99	60.000	ENSCPOG00000010284	-	95	62.826	Cavia_porcellus
ENSAMXG00000020892	-	99	50.190	ENSCCAG00000001323	-	95	51.805	Cebus_capucinus
ENSAMXG00000020892	-	99	61.059	ENSCCAG00000027619	-	95	63.913	Cebus_capucinus
ENSAMXG00000020892	-	90	62.368	ENSCATG00000040148	RBM46	95	63.478	Cercocebus_atys
ENSAMXG00000020892	-	96	60.392	ENSCLAG00000011886	-	95	60.392	Chinchilla_lanigera
ENSAMXG00000020892	-	99	60.075	ENSCLAG00000005846	-	95	62.741	Chinchilla_lanigera
ENSAMXG00000020892	-	99	60.870	ENSCSAG00000003263	RBM46	96	60.870	Chlorocebus_sabaeus
ENSAMXG00000020892	-	99	60.335	ENSCHOG00000003429	RBM46	96	60.521	Choloepus_hoffmanni
ENSAMXG00000020892	-	83	62.500	ENSCPBG00000009314	RBM46	92	62.500	Chrysemys_picta_bellii
ENSAMXG00000020892	-	90	62.156	ENSCANG00000039065	RBM46	95	63.261	Colobus_angolensis_palliatus
ENSAMXG00000020892	-	99	60.491	ENSCGRG00001016714	Rbm46	95	63.478	Cricetulus_griseus_chok1gshd
ENSAMXG00000020892	-	99	60.491	ENSCGRG00000011738	Rbm46	95	63.478	Cricetulus_griseus_crigri
ENSAMXG00000020892	-	88	57.296	ENSCSEG00000005530	rbm46	95	57.363	Cynoglossus_semilaevis
ENSAMXG00000020892	-	88	63.090	ENSCVAG00000021013	rbm46	93	63.090	Cyprinodon_variegatus
ENSAMXG00000020892	-	100	72.000	ENSDARG00000079452	rbm46	100	72.000	Danio_rerio
ENSAMXG00000020892	-	99	61.080	ENSDNOG00000016195	RBM46	96	61.080	Dasypus_novemcinctus
ENSAMXG00000020892	-	99	60.448	ENSDORG00000006405	Rbm46	95	63.383	Dipodomys_ordii
ENSAMXG00000020892	-	99	58.801	ENSETEG00000014902	RBM46	96	58.801	Echinops_telfairi
ENSAMXG00000020892	-	99	60.075	ENSEASG00005015821	RBM46	96	60.075	Equus_asinus_asinus
ENSAMXG00000020892	-	87	63.034	ENSECAG00000007649	RBM46	92	63.067	Equus_caballus
ENSAMXG00000020892	-	99	58.736	ENSEEUG00000011824	RBM46	96	58.736	Erinaceus_europaeus
ENSAMXG00000020892	-	74	68.542	ENSELUG00000008166	rbm46	96	68.367	Esox_lucius
ENSAMXG00000020892	-	99	60.781	ENSFCAG00000029812	RBM46	95	63.539	Felis_catus
ENSAMXG00000020892	-	87	62.826	ENSFALG00000013157	RBM46	87	62.826	Ficedula_albicollis
ENSAMXG00000020892	-	87	62.821	ENSFDAG00000006445	-	88	62.821	Fukomys_damarensis
ENSAMXG00000020892	-	99	59.434	ENSFDAG00000019281	-	96	59.434	Fukomys_damarensis
ENSAMXG00000020892	-	78	61.858	ENSFHEG00000013257	rbm46	87	61.858	Fundulus_heteroclitus
ENSAMXG00000020892	-	86	58.462	ENSGALG00000009278	RBM46	95	58.621	Gallus_gallus
ENSAMXG00000020892	-	67	70.141	ENSGAFG00000020245	rbm46	97	70.141	Gambusia_affinis
ENSAMXG00000020892	-	93	60.279	ENSGAGG00000002019	RBM46	91	60.279	Gopherus_agassizii
ENSAMXG00000020892	-	99	60.870	ENSGGOG00000001876	RBM46	95	63.478	Gorilla_gorilla
ENSAMXG00000020892	-	87	61.894	ENSHBUG00000009609	rbm46	91	67.294	Haplochromis_burtoni
ENSAMXG00000020892	-	96	50.489	ENSHGLG00000010742	-	94	50.489	Heterocephalus_glaber_female
ENSAMXG00000020892	-	95	50.784	ENSHGLG00000002940	-	94	50.784	Heterocephalus_glaber_female
ENSAMXG00000020892	-	99	56.731	ENSHGLG00000002463	-	94	63.294	Heterocephalus_glaber_female
ENSAMXG00000020892	-	99	59.546	ENSHGLG00100012752	-	95	62.174	Heterocephalus_glaber_male
ENSAMXG00000020892	-	95	48.924	ENSHGLG00100018987	-	94	48.924	Heterocephalus_glaber_male
ENSAMXG00000020892	-	96	50.489	ENSHGLG00100004977	-	94	50.489	Heterocephalus_glaber_male
ENSAMXG00000020892	-	86	48.889	ENSHCOG00000012998	rbm46	80	57.237	Hippocampus_comes
ENSAMXG00000020892	-	97	73.025	ENSIPUG00000024038	rbm46	94	75.480	Ictalurus_punctatus
ENSAMXG00000020892	-	99	60.409	ENSSTOG00000007918	RBM46	95	63.383	Ictidomys_tridecemlineatus
ENSAMXG00000020892	-	87	63.557	ENSJJAG00000003902	Rbm46	95	63.478	Jaculus_jaculus
ENSAMXG00000020892	-	91	64.033	ENSKMAG00000015127	rbm46	95	60.571	Kryptolebias_marmoratus
ENSAMXG00000020892	-	99	61.582	ENSLACG00000002062	RBM46	96	61.582	Latimeria_chalumnae
ENSAMXG00000020892	-	100	65.217	ENSLOCG00000008298	rbm46	97	67.888	Lepisosteus_oculatus
ENSAMXG00000020892	-	87	63.326	ENSLAFG00000015448	RBM46	95	63.326	Loxodonta_africana
ENSAMXG00000020892	-	90	62.368	ENSMFAG00000043485	RBM46	95	63.478	Macaca_fascicularis
ENSAMXG00000020892	-	87	63.557	ENSMMUG00000021147	RBM46	92	63.557	Macaca_mulatta
ENSAMXG00000020892	-	90	62.368	ENSMNEG00000002787	RBM46	95	63.478	Macaca_nemestrina
ENSAMXG00000020892	-	90	62.368	ENSMLEG00000029756	RBM46	95	63.478	Mandrillus_leucophaeus
ENSAMXG00000020892	-	87	65.570	ENSMAMG00000009093	rbm46	98	61.079	Mastacembelus_armatus
ENSAMXG00000020892	-	93	61.711	ENSMZEG00005027849	rbm46	97	62.626	Maylandia_zebra
ENSAMXG00000020892	-	86	58.206	ENSMGAG00000001457	RBM46	95	58.369	Meleagris_gallopavo
ENSAMXG00000020892	-	99	60.491	ENSMAUG00000009911	Rbm46	95	63.478	Mesocricetus_auratus
ENSAMXG00000020892	-	99	60.409	ENSMICG00000042747	RBM46	95	63.326	Microcebus_murinus
ENSAMXG00000020892	-	99	60.491	ENSMOCG00000001188	Rbm46	95	63.478	Microtus_ochrogaster
ENSAMXG00000020892	-	87	62.801	ENSMMOG00000011214	rbm46	95	58.846	Mola_mola
ENSAMXG00000020892	-	99	55.479	ENSMODG00000001302	RBM46	96	55.479	Monodelphis_domestica
ENSAMXG00000020892	-	88	59.914	ENSMALG00000006185	rbm46	94	59.914	Monopterus_albus
ENSAMXG00000020892	-	99	60.491	MGP_CAROLIEiJ_G0025101	Rbm46	95	63.478	Mus_caroli
ENSAMXG00000020892	-	99	60.681	ENSMUSG00000033882	Rbm46	95	63.696	Mus_musculus
ENSAMXG00000020892	-	99	60.491	MGP_PahariEiJ_G0026544	Rbm46	95	63.696	Mus_pahari
ENSAMXG00000020892	-	99	60.870	MGP_SPRETEiJ_G0026043	Rbm46	95	63.913	Mus_spretus
ENSAMXG00000020892	-	87	63.617	ENSMPUG00000005670	RBM46	92	63.617	Mustela_putorius_furo
ENSAMXG00000020892	-	99	60.409	ENSMLUG00000003221	RBM46	96	60.409	Myotis_lucifugus
ENSAMXG00000020892	-	99	60.075	ENSNGAG00000004231	Rbm46	94	63.478	Nannospalax_galili
ENSAMXG00000020892	-	87	64.758	ENSNBRG00000000273	rbm46	84	64.270	Neolamprologus_brichardi
ENSAMXG00000020892	-	87	63.341	ENSNLEG00000006184	RBM46	95	63.261	Nomascus_leucogenys
ENSAMXG00000020892	-	82	61.927	ENSMEUG00000013328	RBM46	99	61.395	Notamacropus_eugenii
ENSAMXG00000020892	-	50	78.161	ENSOPRG00000007136	RBM46	92	79.693	Ochotona_princeps
ENSAMXG00000020892	-	92	61.663	ENSODEG00000018002	-	93	61.663	Octodon_degus
ENSAMXG00000020892	-	99	60.113	ENSODEG00000000735	-	95	63.043	Octodon_degus
ENSAMXG00000020892	-	90	62.474	ENSONIG00000014096	rbm46	98	63.425	Oreochromis_niloticus
ENSAMXG00000020892	-	93	61.167	ENSOANG00000002141	RBM46	95	61.167	Ornithorhynchus_anatinus
ENSAMXG00000020892	-	99	60.409	ENSOCUG00000017859	RBM46	96	60.409	Oryctolagus_cuniculus
ENSAMXG00000020892	-	88	62.851	ENSORLG00000002429	rbm46	93	58.835	Oryzias_latipes
ENSAMXG00000020892	-	88	63.636	ENSORLG00020022154	rbm46	93	59.134	Oryzias_latipes_hni
ENSAMXG00000020892	-	88	62.851	ENSORLG00015020234	rbm46	92	62.687	Oryzias_latipes_hsok
ENSAMXG00000020892	-	87	63.377	ENSOMEG00000022580	rbm46	99	58.868	Oryzias_melastigma
ENSAMXG00000020892	-	99	60.409	ENSOGAG00000005647	RBM46	96	60.409	Otolemur_garnettii
ENSAMXG00000020892	-	99	60.595	ENSOARG00000016406	RBM46	96	60.595	Ovis_aries
ENSAMXG00000020892	-	90	62.368	ENSPPAG00000043236	RBM46	95	63.478	Pan_paniscus
ENSAMXG00000020892	-	99	60.781	ENSPPRG00000009416	RBM46	95	63.539	Panthera_pardus
ENSAMXG00000020892	-	99	60.781	ENSPTIG00000017449	RBM46	95	63.539	Panthera_tigris_altaica
ENSAMXG00000020892	-	90	62.368	ENSPTRG00000016538	RBM46	95	63.478	Pan_troglodytes
ENSAMXG00000020892	-	99	60.681	ENSPANG00000004186	RBM46	95	63.478	Papio_anubis
ENSAMXG00000020892	-	99	65.784	ENSPKIG00000015334	rbm46	89	65.784	Paramormyrops_kingsleyae
ENSAMXG00000020892	-	87	62.987	ENSPSIG00000006429	RBM46	91	62.987	Pelodiscus_sinensis
ENSAMXG00000020892	-	91	60.168	ENSPMGG00000019872	rbm46	93	62.092	Periophthalmus_magnuspinnatus
ENSAMXG00000020892	-	99	60.491	ENSPEMG00000013899	Rbm46	95	63.478	Peromyscus_maniculatus_bairdii
ENSAMXG00000020892	-	99	60.674	ENSPCIG00000029626	RBM46	96	60.674	Phascolarctos_cinereus
ENSAMXG00000020892	-	87	60.707	ENSPFOG00000001079	rbm46	93	60.707	Poecilia_formosa
ENSAMXG00000020892	-	91	65.306	ENSPLAG00000004541	rbm46	93	62.500	Poecilia_latipinna
ENSAMXG00000020892	-	90	66.180	ENSPMEG00000015724	rbm46	90	66.300	Poecilia_mexicana
ENSAMXG00000020892	-	98	61.020	ENSPREG00000014464	rbm46	93	65.934	Poecilia_reticulata
ENSAMXG00000020892	-	99	60.681	ENSPPYG00000015144	RBM46	96	60.681	Pongo_abelii
ENSAMXG00000020892	-	99	56.636	ENSPCAG00000003110	RBM46	96	56.822	Procavia_capensis
ENSAMXG00000020892	-	99	60.223	ENSPCOG00000024347	RBM46	95	63.326	Propithecus_coquereli
ENSAMXG00000020892	-	99	60.409	ENSPVAG00000008376	RBM46	96	60.409	Pteropus_vampyrus
ENSAMXG00000020892	-	100	80.000	ENSPNAG00000025312	rbm46	100	80.000	Pygocentrus_nattereri
ENSAMXG00000020892	-	99	60.491	ENSRNOG00000025823	Rbm46	96	60.491	Rattus_norvegicus
ENSAMXG00000020892	-	90	63.291	ENSRBIG00000032583	RBM46	95	64.425	Rhinopithecus_bieti
ENSAMXG00000020892	-	90	63.080	ENSRROG00000044288	RBM46	95	64.208	Rhinopithecus_roxellana
ENSAMXG00000020892	-	99	60.870	ENSSBOG00000033028	RBM46	95	63.913	Saimiri_boliviensis_boliviensis
ENSAMXG00000020892	-	99	60.487	ENSSHAG00000012596	RBM46	96	60.487	Sarcophilus_harrisii
ENSAMXG00000020892	-	100	64.896	ENSSFOG00015000087	rbm46	97	65.201	Scleropages_formosus
ENSAMXG00000020892	-	87	59.251	ENSSMAG00000017042	rbm46	92	59.251	Scophthalmus_maximus
ENSAMXG00000020892	-	91	64.257	ENSSDUG00000020645	rbm46	87	65.733	Seriola_dumerili
ENSAMXG00000020892	-	99	60.634	ENSSARG00000006520	RBM46	96	60.634	Sorex_araneus
ENSAMXG00000020892	-	87	64.130	ENSSPUG00000004773	-	93	64.069	Sphenodon_punctatus
ENSAMXG00000020892	-	99	59.176	ENSSPUG00000012525	-	96	59.176	Sphenodon_punctatus
ENSAMXG00000020892	-	88	64.924	ENSSPAG00000013697	rbm46	93	64.924	Stegastes_partitus
ENSAMXG00000020892	-	88	63.226	ENSSSCG00000008994	RBM46	96	60.680	Sus_scrofa
ENSAMXG00000020892	-	87	62.203	ENSTGUG00000005307	RBM46	95	62.256	Taeniopygia_guttata
ENSAMXG00000020892	-	89	61.407	ENSTRUG00000004237	rbm46	92	61.407	Takifugu_rubripes
ENSAMXG00000020892	-	89	59.619	ENSTNIG00000008714	rbm46	98	55.762	Tetraodon_nigroviridis
ENSAMXG00000020892	-	99	59.480	ENSTBEG00000013949	RBM46	96	59.480	Tupaia_belangeri
ENSAMXG00000020892	-	99	61.626	ENSTTRG00000001239	RBM46	96	61.626	Tursiops_truncatus
ENSAMXG00000020892	-	99	60.781	ENSUAMG00000026593	RBM46	96	60.781	Ursus_americanus
ENSAMXG00000020892	-	99	60.821	ENSUMAG00000016442	RBM46	96	60.821	Ursus_maritimus
ENSAMXG00000020892	-	99	60.595	ENSVVUG00000024957	RBM46	95	63.539	Vulpes_vulpes
ENSAMXG00000020892	-	98	42.293	ENSXETG00000032344	-	96	43.340	Xenopus_tropicalis
ENSAMXG00000020892	-	58	64.238	ENSXETG00000032067	-	81	65.894	Xenopus_tropicalis
ENSAMXG00000020892	-	98	57.197	ENSXETG00000022412	-	95	58.223	Xenopus_tropicalis
ENSAMXG00000020892	-	87	63.559	ENSXMAG00000008237	rbm46	89	63.559	Xiphophorus_maculatus