EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020911 (Gene tree)
Gene ID: 103043134
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12698 bases
Position: chr20:19919866-19932563
Accession: 103043134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021527	CPL	PF08144.11	1.3e-46	1	1
ENSAMXP00000048142	CPL	PF08144.11	1.3e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000021527	-	1985	XM_007255020	ENSAMXP00000021527	630 (aa)	XP_007255082	W5LNW5
ENSAMXT00000034633	-	2409	-	ENSAMXP00000048142	630 (aa)	-	UPI000BBD80E1

Gene Model

Click here to download ENSAMXG00000020911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020911	pum3	92	65.821	ENSG00000080608	PUM3	91	65.821	Homo_sapiens
ENSAMXG00000020911	pum3	99	64.043	ENSAPOG00000020252	pum3	99	64.352	Acanthochromis_polyacanthus
ENSAMXG00000020911	pum3	93	66.162	ENSAMEG00000012187	PUM3	91	66.162	Ailuropoda_melanoleuca
ENSAMXG00000020911	pum3	85	64.486	ENSACIG00000009786	pum3	89	64.299	Amphilophus_citrinellus
ENSAMXG00000020911	pum3	99	63.889	ENSAOCG00000004439	pum3	99	64.198	Amphiprion_ocellaris
ENSAMXG00000020911	pum3	99	63.889	ENSAPEG00000020523	pum3	99	64.198	Amphiprion_percula
ENSAMXG00000020911	pum3	99	63.863	ENSATEG00000005799	pum3	99	64.615	Anabas_testudineus
ENSAMXG00000020911	pum3	98	64.229	ENSAPLG00000002920	PUM3	99	64.229	Anas_platyrhynchos
ENSAMXG00000020911	pum3	93	63.272	ENSACAG00000003174	PUM3	99	63.272	Anolis_carolinensis
ENSAMXG00000020911	pum3	93	65.940	ENSANAG00000024520	PUM3	91	65.940	Aotus_nancymaae
ENSAMXG00000020911	pum3	99	62.481	ENSACLG00000001017	pum3	99	62.481	Astatotilapia_calliptera
ENSAMXG00000020911	pum3	93	65.604	ENSBTAG00000013357	PUM3	92	65.604	Bos_taurus
ENSAMXG00000020911	pum3	80	33.333	WBGene00014165	puf-12	66	33.333	Caenorhabditis_elegans
ENSAMXG00000020911	pum3	93	66.443	ENSCJAG00000010917	PUM3	92	66.443	Callithrix_jacchus
ENSAMXG00000020911	pum3	93	65.657	ENSCAFG00000002035	PUM3	91	65.657	Canis_familiaris
ENSAMXG00000020911	pum3	93	65.657	ENSCAFG00020026867	PUM3	91	65.657	Canis_lupus_dingo
ENSAMXG00000020911	pum3	93	65.436	ENSCHIG00000021559	PUM3	92	65.436	Capra_hircus
ENSAMXG00000020911	pum3	93	65.159	ENSTSYG00000007481	PUM3	92	65.159	Carlito_syrichta
ENSAMXG00000020911	pum3	99	62.461	ENSCAPG00000010592	-	95	62.461	Cavia_aperea
ENSAMXG00000020911	pum3	99	62.618	ENSCPOG00000008552	-	96	62.618	Cavia_porcellus
ENSAMXG00000020911	pum3	95	65.449	ENSCCAG00000032650	PUM3	91	65.449	Cebus_capucinus
ENSAMXG00000020911	pum3	93	66.499	ENSCATG00000024880	PUM3	92	66.499	Cercocebus_atys
ENSAMXG00000020911	pum3	93	66.164	ENSCLAG00000011892	PUM3	92	66.164	Chinchilla_lanigera
ENSAMXG00000020911	pum3	93	66.332	ENSCSAG00000008691	PUM3	92	66.332	Chlorocebus_sabaeus
ENSAMXG00000020911	pum3	79	55.000	ENSCHOG00000002535	PUM3	62	61.995	Choloepus_hoffmanni
ENSAMXG00000020911	pum3	100	63.777	ENSCPBG00000025470	PUM3	95	63.777	Chrysemys_picta_bellii
ENSAMXG00000020911	pum3	86	39.318	ENSCING00000024199	-	97	38.241	Ciona_intestinalis
ENSAMXG00000020911	pum3	86	40.073	ENSCSAVG00000006072	-	97	36.935	Ciona_savignyi
ENSAMXG00000020911	pum3	93	66.164	ENSCANG00000006142	PUM3	92	66.164	Colobus_angolensis_palliatus
ENSAMXG00000020911	pum3	95	65.449	ENSCGRG00001016402	Pum3	91	65.449	Cricetulus_griseus_chok1gshd
ENSAMXG00000020911	pum3	95	65.449	ENSCGRG00000010207	Pum3	91	65.449	Cricetulus_griseus_crigri
ENSAMXG00000020911	pum3	89	62.349	ENSCSEG00000001565	pum3	99	63.339	Cynoglossus_semilaevis
ENSAMXG00000020911	pum3	76	57.746	ENSCVAG00000006550	pum3	99	57.746	Cyprinodon_variegatus
ENSAMXG00000020911	pum3	100	81.429	ENSDARG00000087779	pum3	100	81.429	Danio_rerio
ENSAMXG00000020911	pum3	93	56.187	ENSDNOG00000008157	PUM3	64	56.187	Dasypus_novemcinctus
ENSAMXG00000020911	pum3	83	65.589	ENSETEG00000015331	PUM3	84	66.055	Echinops_telfairi
ENSAMXG00000020911	pum3	83	41.573	ENSEBUG00000011586	pum3	78	41.573	Eptatretus_burgeri
ENSAMXG00000020911	pum3	93	66.275	ENSEASG00005010350	PUM3	92	66.275	Equus_asinus_asinus
ENSAMXG00000020911	pum3	93	66.107	ENSECAG00000017193	PUM3	92	66.107	Equus_caballus
ENSAMXG00000020911	pum3	87	58.664	ENSEEUG00000010314	PUM3	99	55.907	Erinaceus_europaeus
ENSAMXG00000020911	pum3	99	77.193	ENSELUG00000002215	pum3	97	77.193	Esox_lucius
ENSAMXG00000020911	pum3	100	64.186	ENSFALG00000010509	PUM3	99	64.186	Ficedula_albicollis
ENSAMXG00000020911	pum3	93	65.772	ENSFDAG00000021027	PUM3	92	65.772	Fukomys_damarensis
ENSAMXG00000020911	pum3	94	70.506	ENSFHEG00000015576	pum3	99	70.506	Fundulus_heteroclitus
ENSAMXG00000020911	pum3	85	65.234	ENSGMOG00000014217	pum3	99	65.234	Gadus_morhua
ENSAMXG00000020911	pum3	97	65.635	ENSGALG00000010178	PUM3	96	64.968	Gallus_gallus
ENSAMXG00000020911	pum3	57	67.036	ENSGAFG00000001930	pum3	62	67.036	Gambusia_affinis
ENSAMXG00000020911	pum3	84	70.865	ENSGACG00000017878	pum3	97	70.865	Gasterosteus_aculeatus
ENSAMXG00000020911	pum3	99	64.308	ENSGAGG00000018983	PUM3	99	64.308	Gopherus_agassizii
ENSAMXG00000020911	pum3	92	65.821	ENSGGOG00000006143	PUM3	91	65.821	Gorilla_gorilla
ENSAMXG00000020911	pum3	99	55.678	ENSHBUG00000012903	pum3	99	55.678	Haplochromis_burtoni
ENSAMXG00000020911	pum3	93	64.765	ENSHGLG00000015868	-	92	65.436	Heterocephalus_glaber_female
ENSAMXG00000020911	pum3	93	64.765	ENSHGLG00100018825	PUM3	92	65.436	Heterocephalus_glaber_male
ENSAMXG00000020911	pum3	95	62.677	ENSHCOG00000010306	pum3	99	62.575	Hippocampus_comes
ENSAMXG00000020911	pum3	100	82.567	ENSIPUG00000024801	pum3	100	82.567	Ictalurus_punctatus
ENSAMXG00000020911	pum3	100	61.751	ENSSTOG00000009586	PUM3	99	61.751	Ictidomys_tridecemlineatus
ENSAMXG00000020911	pum3	98	62.036	ENSJJAG00000012563	Pum3	92	62.036	Jaculus_jaculus
ENSAMXG00000020911	pum3	99	62.911	ENSKMAG00000010277	pum3	99	63.551	Kryptolebias_marmoratus
ENSAMXG00000020911	pum3	99	63.014	ENSLBEG00000012213	pum3	99	63.318	Labrus_bergylta
ENSAMXG00000020911	pum3	100	64.230	ENSLACG00000008312	PUM3	99	64.752	Latimeria_chalumnae
ENSAMXG00000020911	pum3	100	75.714	ENSLOCG00000012529	pum3	99	75.714	Lepisosteus_oculatus
ENSAMXG00000020911	pum3	98	63.317	ENSLAFG00000017341	PUM3	95	63.317	Loxodonta_africana
ENSAMXG00000020911	pum3	93	66.332	ENSMFAG00000001430	PUM3	92	66.332	Macaca_fascicularis
ENSAMXG00000020911	pum3	93	66.332	ENSMMUG00000002362	PUM3	90	66.332	Macaca_mulatta
ENSAMXG00000020911	pum3	93	66.332	ENSMNEG00000035288	PUM3	92	66.332	Macaca_nemestrina
ENSAMXG00000020911	pum3	93	66.499	ENSMLEG00000034820	PUM3	92	66.499	Mandrillus_leucophaeus
ENSAMXG00000020911	pum3	99	62.058	ENSMAMG00000022861	pum3	99	62.940	Mastacembelus_armatus
ENSAMXG00000020911	pum3	99	62.481	ENSMZEG00005014205	pum3	96	62.481	Maylandia_zebra
ENSAMXG00000020911	pum3	99	57.788	ENSMGAG00000002255	PUM3	98	59.091	Meleagris_gallopavo
ENSAMXG00000020911	pum3	98	63.328	ENSMAUG00000009733	Pum3	92	63.328	Mesocricetus_auratus
ENSAMXG00000020911	pum3	93	65.327	ENSMICG00000045916	PUM3	80	65.327	Microcebus_murinus
ENSAMXG00000020911	pum3	98	61.290	ENSMOCG00000014830	-	93	61.290	Microtus_ochrogaster
ENSAMXG00000020911	pum3	98	63.548	ENSMOCG00000019519	-	92	63.548	Microtus_ochrogaster
ENSAMXG00000020911	pum3	96	60.292	ENSMMOG00000012184	pum3	99	60.292	Mola_mola
ENSAMXG00000020911	pum3	87	65.027	ENSMODG00000015417	PUM3	76	65.027	Monodelphis_domestica
ENSAMXG00000020911	pum3	99	62.766	ENSMALG00000022164	pum3	92	63.939	Monopterus_albus
ENSAMXG00000020911	pum3	95	64.618	MGP_CAROLIEiJ_G0022845	Pum3	91	64.618	Mus_caroli
ENSAMXG00000020911	pum3	95	63.894	ENSMUSG00000041360	Pum3	92	62.197	Mus_musculus
ENSAMXG00000020911	pum3	99	62.679	MGP_PahariEiJ_G0014338	Pum3	94	62.739	Mus_pahari
ENSAMXG00000020911	pum3	95	63.894	MGP_SPRETEiJ_G0023763	Pum3	91	63.894	Mus_spretus
ENSAMXG00000020911	pum3	93	65.152	ENSMPUG00000005125	PUM3	91	65.152	Mustela_putorius_furo
ENSAMXG00000020911	pum3	93	65.327	ENSMLUG00000002309	PUM3	92	64.992	Myotis_lucifugus
ENSAMXG00000020911	pum3	83	64.896	ENSNGAG00000019468	Pum3	91	62.203	Nannospalax_galili
ENSAMXG00000020911	pum3	96	60.000	ENSNBRG00000021370	pum3	94	60.000	Neolamprologus_brichardi
ENSAMXG00000020911	pum3	98	64.434	ENSNLEG00000008712	PUM3	95	64.434	Nomascus_leucogenys
ENSAMXG00000020911	pum3	77	49.076	ENSMEUG00000013606	-	99	49.503	Notamacropus_eugenii
ENSAMXG00000020911	pum3	65	58.333	ENSOPRG00000004225	-	64	58.333	Ochotona_princeps
ENSAMXG00000020911	pum3	93	60.667	ENSODEG00000016477	-	91	60.667	Octodon_degus
ENSAMXG00000020911	pum3	93	65.997	ENSODEG00000003625	-	92	65.997	Octodon_degus
ENSAMXG00000020911	pum3	99	62.597	ENSONIG00000012733	pum3	99	62.597	Oreochromis_niloticus
ENSAMXG00000020911	pum3	83	66.224	ENSOANG00000014995	PUM3	99	66.667	Ornithorhynchus_anatinus
ENSAMXG00000020911	pum3	93	65.604	ENSOCUG00000004189	-	92	65.604	Oryctolagus_cuniculus
ENSAMXG00000020911	pum3	93	65.436	ENSOCUG00000026104	-	92	65.436	Oryctolagus_cuniculus
ENSAMXG00000020911	pum3	99	59.877	ENSORLG00000014935	pum3	99	61.420	Oryzias_latipes
ENSAMXG00000020911	pum3	99	59.724	ENSORLG00020002841	pum3	99	61.610	Oryzias_latipes_hni
ENSAMXG00000020911	pum3	99	61.111	ENSORLG00015015906	pum3	97	64.425	Oryzias_latipes_hsok
ENSAMXG00000020911	pum3	99	60.494	ENSOMEG00000009427	pum3	99	61.300	Oryzias_melastigma
ENSAMXG00000020911	pum3	99	63.694	ENSOGAG00000008125	-	94	63.694	Otolemur_garnettii
ENSAMXG00000020911	pum3	97	46.552	ENSOGAG00000033481	-	99	45.298	Otolemur_garnettii
ENSAMXG00000020911	pum3	93	65.101	ENSOARG00000013337	PUM3	92	65.101	Ovis_aries
ENSAMXG00000020911	pum3	92	65.821	ENSPPAG00000041337	PUM3	91	65.821	Pan_paniscus
ENSAMXG00000020911	pum3	93	64.983	ENSPPRG00000000809	PUM3	91	64.983	Panthera_pardus
ENSAMXG00000020911	pum3	93	65.152	ENSPTIG00000021934	PUM3	91	65.152	Panthera_tigris_altaica
ENSAMXG00000020911	pum3	92	65.990	ENSPTRG00000020735	PUM3	91	65.990	Pan_troglodytes
ENSAMXG00000020911	pum3	98	64.434	ENSPANG00000025118	PUM3	92	66.499	Papio_anubis
ENSAMXG00000020911	pum3	100	76.636	ENSPKIG00000022249	pum3	99	75.493	Paramormyrops_kingsleyae
ENSAMXG00000020911	pum3	100	62.404	ENSPSIG00000016272	PUM3	99	62.404	Pelodiscus_sinensis
ENSAMXG00000020911	pum3	78	66.260	ENSPMGG00000021261	pum3	96	66.528	Periophthalmus_magnuspinnatus
ENSAMXG00000020911	pum3	99	52.997	ENSPEMG00000019340	-	92	60.000	Peromyscus_maniculatus_bairdii
ENSAMXG00000020911	pum3	87	65.385	ENSPCIG00000030598	PUM3	73	65.385	Phascolarctos_cinereus
ENSAMXG00000020911	pum3	99	60.849	ENSPFOG00000001719	pum3	99	60.849	Poecilia_formosa
ENSAMXG00000020911	pum3	99	61.265	ENSPLAG00000020010	pum3	99	61.420	Poecilia_latipinna
ENSAMXG00000020911	pum3	99	61.420	ENSPMEG00000017451	pum3	99	61.574	Poecilia_mexicana
ENSAMXG00000020911	pum3	51	73.684	ENSPREG00000019478	-	69	73.684	Poecilia_reticulata
ENSAMXG00000020911	pum3	92	66.159	ENSPPYG00000019255	PUM3	91	66.159	Pongo_abelii
ENSAMXG00000020911	pum3	97	53.632	ENSPCAG00000005797	PUM3	90	56.704	Procavia_capensis
ENSAMXG00000020911	pum3	93	64.933	ENSPCOG00000027325	PUM3	92	64.933	Propithecus_coquereli
ENSAMXG00000020911	pum3	93	64.262	ENSPVAG00000016135	PUM3	87	64.262	Pteropus_vampyrus
ENSAMXG00000020911	pum3	99	62.675	ENSPNYG00000016124	pum3	99	62.675	Pundamilia_nyererei
ENSAMXG00000020911	pum3	100	83.810	ENSPNAG00000026524	pum3	100	83.810	Pygocentrus_nattereri
ENSAMXG00000020911	pum3	99	64.184	ENSRNOG00000012574	Pum3	95	64.082	Rattus_norvegicus
ENSAMXG00000020911	pum3	99	63.867	ENSRNOG00000048356	RGD1308750	95	63.766	Rattus_norvegicus
ENSAMXG00000020911	pum3	93	65.829	ENSRBIG00000036924	PUM3	92	65.829	Rhinopithecus_bieti
ENSAMXG00000020911	pum3	93	65.997	ENSRROG00000041089	PUM3	92	65.997	Rhinopithecus_roxellana
ENSAMXG00000020911	pum3	93	65.829	ENSSBOG00000028066	PUM3	92	65.829	Saimiri_boliviensis_boliviensis
ENSAMXG00000020911	pum3	97	60.155	ENSSHAG00000003730	PUM3	99	60.155	Sarcophilus_harrisii
ENSAMXG00000020911	pum3	100	74.299	ENSSFOG00015018778	pum3	99	74.299	Scleropages_formosus
ENSAMXG00000020911	pum3	99	62.006	ENSSMAG00000013236	pum3	99	64.877	Scophthalmus_maximus
ENSAMXG00000020911	pum3	99	64.060	ENSSDUG00000001887	pum3	96	65.679	Seriola_dumerili
ENSAMXG00000020911	pum3	99	64.840	ENSSLDG00000015766	pum3	99	65.145	Seriola_lalandi_dorsalis
ENSAMXG00000020911	pum3	93	61.149	ENSSARG00000000579	PUM3	95	61.149	Sorex_araneus
ENSAMXG00000020911	pum3	99	64.000	ENSSPUG00000001707	PUM3	99	64.219	Sphenodon_punctatus
ENSAMXG00000020911	pum3	99	62.693	ENSSPAG00000003976	pum3	99	63.354	Stegastes_partitus
ENSAMXG00000020911	pum3	98	63.578	ENSSSCG00000005227	PUM3	95	63.578	Sus_scrofa
ENSAMXG00000020911	pum3	99	64.623	ENSTGUG00000005339	PUM3	99	64.623	Taeniopygia_guttata
ENSAMXG00000020911	pum3	99	63.262	ENSTRUG00000004074	pum3	99	63.262	Takifugu_rubripes
ENSAMXG00000020911	pum3	100	66.086	ENSTNIG00000010325	pum3	99	66.878	Tetraodon_nigroviridis
ENSAMXG00000020911	pum3	83	49.242	ENSTBEG00000013058	PUM3	85	49.819	Tupaia_belangeri
ENSAMXG00000020911	pum3	93	58.557	ENSTTRG00000001062	PUM3	88	58.557	Tursiops_truncatus
ENSAMXG00000020911	pum3	93	59.160	ENSUMAG00000018443	PUM3	99	63.653	Ursus_maritimus
ENSAMXG00000020911	pum3	93	65.940	ENSVPAG00000010766	PUM3	91	65.940	Vicugna_pacos
ENSAMXG00000020911	pum3	93	65.657	ENSVVUG00000006527	PUM3	91	65.657	Vulpes_vulpes
ENSAMXG00000020911	pum3	97	55.357	ENSXETG00000011707	pum3	98	54.803	Xenopus_tropicalis
ENSAMXG00000020911	pum3	95	59.016	ENSXCOG00000006725	pum3	99	59.016	Xiphophorus_couchianus
ENSAMXG00000020911	pum3	99	60.742	ENSXMAG00000002926	pum3	99	60.742	Xiphophorus_maculatus