EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000020949 (Gene tree)
Gene ID: 103023166
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 18600 bases
Position: chr4:17942190-17960789
Accession: 103023166
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000021578	eIF-3c_N	PF05470.12	2.6e-255	1	1
ENSAMXP00000021582	eIF-3c_N	PF05470.12	2.6e-255	1	1
ENSAMXP00000042243	eIF-3c_N	PF05470.12	2.7e-255	1	1
ENSAMXP00000054956	eIF-3c_N	PF05470.12	3.1e-255	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000049274	-	3478	XM_022669239	ENSAMXP00000042243	939 (aa)	XP_022524960	-
ENSAMXT00000021578	-	3448	XM_022669236	ENSAMXP00000021578	929 (aa)	XP_022524957	W5LP16
ENSAMXT00000021582	-	3448	XM_007248693	ENSAMXP00000021582	929 (aa)	XP_007248755	W5LP20
ENSAMXT00000051360	-	3801	-	ENSAMXP00000054956	960 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000020949's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000020949's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000020949	eif3c	98	76.638	ENSG00000184110	EIF3C	100	84.810	Homo_sapiens
ENSAMXG00000020949	eif3c	98	76.772	ENSG00000205609	EIF3CL	99	76.729	Homo_sapiens
ENSAMXG00000020949	eif3c	100	86.752	ENSAPOG00000024092	eif3c	100	86.752	Acanthochromis_polyacanthus
ENSAMXG00000020949	eif3c	98	76.965	ENSAMEG00000015454	-	99	76.923	Ailuropoda_melanoleuca
ENSAMXG00000020949	eif3c	91	93.667	ENSACIG00000015082	eif3c	98	93.511	Amphilophus_citrinellus
ENSAMXG00000020949	eif3c	100	87.500	ENSAOCG00000021466	eif3c	100	87.607	Amphiprion_ocellaris
ENSAMXG00000020949	eif3c	100	87.500	ENSAPEG00000010521	eif3c	100	87.607	Amphiprion_percula
ENSAMXG00000020949	eif3c	100	87.193	ENSATEG00000019001	eif3c	100	87.300	Anabas_testudineus
ENSAMXG00000020949	eif3c	99	76.824	ENSACAG00000005937	-	99	77.522	Anolis_carolinensis
ENSAMXG00000020949	eif3c	98	76.638	ENSANAG00000020640	-	99	76.593	Aotus_nancymaae
ENSAMXG00000020949	eif3c	85	93.168	ENSACLG00000009347	eif3c	95	93.168	Astatotilapia_calliptera
ENSAMXG00000020949	eif3c	85	90.062	ENSACLG00000009322	eif3c	92	90.062	Astatotilapia_calliptera
ENSAMXG00000020949	eif3c	98	76.503	ENSBTAG00000006543	EIF3CL	99	77.033	Bos_taurus
ENSAMXG00000020949	eif3c	99	42.600	WBGene00001226	eif-3.C	67	47.528	Caenorhabditis_elegans
ENSAMXG00000020949	eif3c	98	76.747	ENSCJAG00000006341	-	99	77.384	Callithrix_jacchus
ENSAMXG00000020949	eif3c	98	77.074	ENSCAFG00000017143	-	99	77.033	Canis_familiaris
ENSAMXG00000020949	eif3c	98	77.074	ENSCAFG00020017587	-	99	77.033	Canis_lupus_dingo
ENSAMXG00000020949	eif3c	98	76.503	ENSCHIG00000024795	-	99	76.923	Capra_hircus
ENSAMXG00000020949	eif3c	98	76.310	ENSTSYG00000003486	-	99	76.374	Carlito_syrichta
ENSAMXG00000020949	eif3c	95	69.570	ENSCAPG00000015887	-	99	69.056	Cavia_aperea
ENSAMXG00000020949	eif3c	98	76.638	ENSCPOG00000007533	-	99	76.593	Cavia_porcellus
ENSAMXG00000020949	eif3c	98	72.876	ENSCCAG00000027724	-	99	71.648	Cebus_capucinus
ENSAMXG00000020949	eif3c	98	64.995	ENSCCAG00000029099	-	98	64.972	Cebus_capucinus
ENSAMXG00000020949	eif3c	98	75.519	ENSCCAG00000034928	-	99	76.374	Cebus_capucinus
ENSAMXG00000020949	eif3c	100	75.751	ENSCATG00000032673	-	99	76.593	Cercocebus_atys
ENSAMXG00000020949	eif3c	98	76.772	ENSCLAG00000011094	-	99	76.484	Chinchilla_lanigera
ENSAMXG00000020949	eif3c	100	75.751	ENSCSAG00000006297	-	99	76.593	Chlorocebus_sabaeus
ENSAMXG00000020949	eif3c	53	69.112	ENSCHOG00000003120	-	88	69.112	Choloepus_hoffmanni
ENSAMXG00000020949	eif3c	63	88.599	ENSCPBG00000012407	-	93	74.225	Chrysemys_picta_bellii
ENSAMXG00000020949	eif3c	75	56.522	ENSCSAVG00000006744	-	92	56.522	Ciona_savignyi
ENSAMXG00000020949	eif3c	100	75.751	ENSCANG00000033626	-	99	76.593	Colobus_angolensis_palliatus
ENSAMXG00000020949	eif3c	98	75.655	ENSCGRG00001015265	EIF3C	99	75.851	Cricetulus_griseus_chok1gshd
ENSAMXG00000020949	eif3c	100	84.829	ENSCSEG00000017770	eif3c	100	84.722	Cynoglossus_semilaevis
ENSAMXG00000020949	eif3c	100	85.561	ENSCVAG00000005402	eif3c	100	85.989	Cyprinodon_variegatus
ENSAMXG00000020949	eif3c	100	88.639	ENSDARG00000016443	eif3c	100	87.138	Danio_rerio
ENSAMXG00000020949	eif3c	98	76.747	ENSDNOG00000031497	-	99	76.703	Dasypus_novemcinctus
ENSAMXG00000020949	eif3c	98	75.328	ENSDORG00000016471	Eif3c	99	76.374	Dipodomys_ordii
ENSAMXG00000020949	eif3c	67	57.508	FBgn0034258	eIF3c	97	51.876	Drosophila_melanogaster
ENSAMXG00000020949	eif3c	90	84.018	ENSETEG00000013527	-	91	85.514	Echinops_telfairi
ENSAMXG00000020949	eif3c	98	59.959	ENSEBUG00000001629	eif3c	99	62.513	Eptatretus_burgeri
ENSAMXG00000020949	eif3c	98	76.965	ENSECAG00000008746	-	99	76.923	Equus_caballus
ENSAMXG00000020949	eif3c	86	76.846	ENSEEUG00000006148	-	99	76.817	Erinaceus_europaeus
ENSAMXG00000020949	eif3c	62	56.969	ENSEEUG00000000726	-	64	56.367	Erinaceus_europaeus
ENSAMXG00000020949	eif3c	100	86.674	ENSELUG00000022257	eif3c	92	93.069	Esox_lucius
ENSAMXG00000020949	eif3c	98	76.638	ENSFCAG00000015782	-	99	76.703	Felis_catus
ENSAMXG00000020949	eif3c	98	75.873	ENSFDAG00000003588	-	99	76.400	Fukomys_damarensis
ENSAMXG00000020949	eif3c	100	85.608	ENSFHEG00000014154	EIF3C	100	85.608	Fundulus_heteroclitus
ENSAMXG00000020949	eif3c	95	85.682	ENSGMOG00000016885	eif3c	100	86.577	Gadus_morhua
ENSAMXG00000020949	eif3c	95	85.164	ENSGACG00000007652	eif3c	99	85.071	Gasterosteus_aculeatus
ENSAMXG00000020949	eif3c	92	75.347	ENSGAGG00000006666	-	99	76.010	Gopherus_agassizii
ENSAMXG00000020949	eif3c	98	75.439	ENSGGOG00000026919	EIF3C	99	77.029	Gorilla_gorilla
ENSAMXG00000020949	eif3c	98	76.310	ENSHGLG00000011445	EIF3C	99	76.729	Heterocephalus_glaber_female
ENSAMXG00000020949	eif3c	98	76.310	ENSHGLG00100000217	EIF3C	99	76.729	Heterocephalus_glaber_male
ENSAMXG00000020949	eif3c	100	84.064	ENSHCOG00000019694	eif3c	100	83.262	Hippocampus_comes
ENSAMXG00000020949	eif3c	99	88.077	ENSIPUG00000016878	eif3c	99	89.462	Ictalurus_punctatus
ENSAMXG00000020949	eif3c	98	76.747	ENSSTOG00000021278	-	99	76.703	Ictidomys_tridecemlineatus
ENSAMXG00000020949	eif3c	98	74.345	ENSJJAG00000012722	Eif3c	99	75.495	Jaculus_jaculus
ENSAMXG00000020949	eif3c	98	87.104	ENSKMAG00000021662	eif3c	100	85.095	Kryptolebias_marmoratus
ENSAMXG00000020949	eif3c	100	85.974	ENSLBEG00000023370	eif3c	100	86.188	Labrus_bergylta
ENSAMXG00000020949	eif3c	97	79.533	ENSLACG00000000770	eif3c	100	79.389	Latimeria_chalumnae
ENSAMXG00000020949	eif3c	98	76.419	ENSLAFG00000027426	-	99	76.729	Loxodonta_africana
ENSAMXG00000020949	eif3c	100	75.751	ENSMFAG00000041930	-	99	76.593	Macaca_fascicularis
ENSAMXG00000020949	eif3c	100	75.751	ENSMMUG00000011798	-	99	76.593	Macaca_mulatta
ENSAMXG00000020949	eif3c	100	75.751	ENSMNEG00000023915	-	99	76.593	Macaca_nemestrina
ENSAMXG00000020949	eif3c	100	75.751	ENSMLEG00000027529	-	99	76.593	Mandrillus_leucophaeus
ENSAMXG00000020949	eif3c	100	86.966	ENSMAMG00000012512	eif3c	100	86.859	Mastacembelus_armatus
ENSAMXG00000020949	eif3c	89	93.168	ENSMZEG00005013699	eif3c	95	93.168	Maylandia_zebra
ENSAMXG00000020949	eif3c	85	90.062	ENSMZEG00005013685	eif3c	92	90.062	Maylandia_zebra
ENSAMXG00000020949	eif3c	98	75.764	ENSMAUG00000010621	Eif3c	99	75.741	Mesocricetus_auratus
ENSAMXG00000020949	eif3c	98	76.747	ENSMICG00000036748	-	99	76.703	Microcebus_murinus
ENSAMXG00000020949	eif3c	98	74.017	ENSMOCG00000004204	Eif3c	99	74.094	Microtus_ochrogaster
ENSAMXG00000020949	eif3c	100	79.892	ENSMMOG00000001572	eif3c	99	80.418	Mola_mola
ENSAMXG00000020949	eif3c	100	75.670	ENSMODG00000015579	-	100	75.000	Monodelphis_domestica
ENSAMXG00000020949	eif3c	85	92.640	ENSMALG00000008907	eif3c	92	94.563	Monopterus_albus
ENSAMXG00000020949	eif3c	98	75.519	MGP_CAROLIEiJ_G0030451	Eif3c	99	75.604	Mus_caroli
ENSAMXG00000020949	eif3c	98	75.519	ENSMUSG00000030738	Eif3c	99	75.604	Mus_musculus
ENSAMXG00000020949	eif3c	98	74.754	MGP_PahariEiJ_G0013661	Eif3c	99	75.055	Mus_pahari
ENSAMXG00000020949	eif3c	98	75.519	MGP_SPRETEiJ_G0031565	Eif3c	99	75.604	Mus_spretus
ENSAMXG00000020949	eif3c	95	77.526	ENSMPUG00000012732	-	99	77.486	Mustela_putorius_furo
ENSAMXG00000020949	eif3c	98	76.066	ENSMLUG00000015558	-	99	75.934	Myotis_lucifugus
ENSAMXG00000020949	eif3c	81	63.902	ENSNGAG00000010901	-	98	63.636	Nannospalax_galili
ENSAMXG00000020949	eif3c	98	75.328	ENSNGAG00000007177	-	99	76.264	Nannospalax_galili
ENSAMXG00000020949	eif3c	98	67.638	ENSNLEG00000001425	-	99	66.775	Nomascus_leucogenys
ENSAMXG00000020949	eif3c	100	63.305	ENSMEUG00000009939	-	99	64.215	Notamacropus_eugenii
ENSAMXG00000020949	eif3c	91	59.441	ENSMEUG00000005317	-	93	63.810	Notamacropus_eugenii
ENSAMXG00000020949	eif3c	98	76.310	ENSOPRG00000000931	-	99	76.484	Ochotona_princeps
ENSAMXG00000020949	eif3c	100	75.215	ENSODEG00000013508	-	99	76.264	Octodon_degus
ENSAMXG00000020949	eif3c	67	69.010	ENSONIG00000011434	eif3c	100	68.860	Oreochromis_niloticus
ENSAMXG00000020949	eif3c	100	73.825	ENSOANG00000011410	-	100	73.583	Ornithorhynchus_anatinus
ENSAMXG00000020949	eif3c	98	76.856	ENSOCUG00000022489	-	99	76.813	Oryctolagus_cuniculus
ENSAMXG00000020949	eif3c	97	84.768	ENSORLG00000006318	eif3c	97	85.038	Oryzias_latipes
ENSAMXG00000020949	eif3c	97	84.768	ENSORLG00020015713	eif3c	99	92.071	Oryzias_latipes_hni
ENSAMXG00000020949	eif3c	97	84.768	ENSORLG00015013772	eif3c	100	84.385	Oryzias_latipes_hsok
ENSAMXG00000020949	eif3c	100	86.159	ENSOMEG00000020450	eif3c	100	86.159	Oryzias_melastigma
ENSAMXG00000020949	eif3c	98	76.445	ENSOGAG00000012737	-	99	76.264	Otolemur_garnettii
ENSAMXG00000020949	eif3c	98	76.503	ENSOARG00000002892	-	99	76.923	Ovis_aries
ENSAMXG00000020949	eif3c	98	76.638	ENSPPRG00000012336	-	99	76.703	Panthera_pardus
ENSAMXG00000020949	eif3c	98	76.638	ENSPTIG00000011712	-	99	76.703	Panthera_tigris_altaica
ENSAMXG00000020949	eif3c	100	75.751	ENSPANG00000021151	-	99	76.593	Papio_anubis
ENSAMXG00000020949	eif3c	100	85.867	ENSPKIG00000002049	eif3c	100	85.546	Paramormyrops_kingsleyae
ENSAMXG00000020949	eif3c	90	91.896	ENSPMGG00000005409	eif3c	99	81.808	Periophthalmus_magnuspinnatus
ENSAMXG00000020949	eif3c	98	75.764	ENSPEMG00000010899	Eif3c	99	75.714	Peromyscus_maniculatus_bairdii
ENSAMXG00000020949	eif3c	100	75.777	ENSPCIG00000025206	-	100	75.107	Phascolarctos_cinereus
ENSAMXG00000020949	eif3c	100	84.968	ENSPFOG00000004476	eif3c	100	85.165	Poecilia_formosa
ENSAMXG00000020949	eif3c	100	78.495	ENSPLAG00000017480	eif3c	100	84.660	Poecilia_latipinna
ENSAMXG00000020949	eif3c	100	85.272	ENSPMEG00000019512	eif3c	100	85.577	Poecilia_mexicana
ENSAMXG00000020949	eif3c	100	79.440	ENSPREG00000023139	eif3c	99	80.698	Poecilia_reticulata
ENSAMXG00000020949	eif3c	98	74.536	ENSPPYG00000007227	-	99	74.505	Pongo_abelii
ENSAMXG00000020949	eif3c	65	83.389	ENSPCAG00000012710	-	99	83.920	Procavia_capensis
ENSAMXG00000020949	eif3c	98	76.747	ENSPCOG00000019289	-	99	76.703	Propithecus_coquereli
ENSAMXG00000020949	eif3c	98	76.638	ENSPVAG00000005804	-	99	76.839	Pteropus_vampyrus
ENSAMXG00000020949	eif3c	53	90.062	ENSPNYG00000016530	eif3c	83	92.216	Pundamilia_nyererei
ENSAMXG00000020949	eif3c	100	94.409	ENSPNAG00000024040	eif3c	100	93.978	Pygocentrus_nattereri
ENSAMXG00000020949	eif3c	98	75.082	ENSRNOG00000018761	Eif3c	99	75.495	Rattus_norvegicus
ENSAMXG00000020949	eif3c	95	77.740	ENSRBIG00000044009	-	98	75.501	Rhinopithecus_bieti
ENSAMXG00000020949	eif3c	100	75.751	ENSRROG00000043626	-	99	76.593	Rhinopithecus_roxellana
ENSAMXG00000020949	eif3c	70	31.351	YMR309C	-	81	31.541	Saccharomyces_cerevisiae
ENSAMXG00000020949	eif3c	98	76.638	ENSSBOG00000032155	-	99	76.593	Saimiri_boliviensis_boliviensis
ENSAMXG00000020949	eif3c	96	76.444	ENSSHAG00000011808	-	99	76.651	Sarcophilus_harrisii
ENSAMXG00000020949	eif3c	100	84.995	ENSSFOG00015021823	eif3c	100	84.962	Scleropages_formosus
ENSAMXG00000020949	eif3c	98	84.096	ENSSMAG00000016638	eif3c	97	86.323	Scophthalmus_maximus
ENSAMXG00000020949	eif3c	100	87.594	ENSSDUG00000023117	eif3c	100	87.487	Seriola_dumerili
ENSAMXG00000020949	eif3c	100	87.701	ENSSLDG00000009706	eif3c	100	87.594	Seriola_lalandi_dorsalis
ENSAMXG00000020949	eif3c	99	76.022	ENSSPUG00000016470	-	99	76.484	Sphenodon_punctatus
ENSAMXG00000020949	eif3c	100	87.073	ENSSPAG00000000426	eif3c	100	87.179	Stegastes_partitus
ENSAMXG00000020949	eif3c	98	76.092	ENSSSCG00000034927	-	99	76.264	Sus_scrofa
ENSAMXG00000020949	eif3c	99	83.726	ENSTRUG00000008951	eif3c	99	84.813	Takifugu_rubripes
ENSAMXG00000020949	eif3c	100	82.460	ENSTNIG00000015210	eif3c	100	83.138	Tetraodon_nigroviridis
ENSAMXG00000020949	eif3c	98	76.638	ENSTTRG00000005880	-	99	76.593	Tursiops_truncatus
ENSAMXG00000020949	eif3c	66	83.824	ENSUAMG00000001127	-	91	92.675	Ursus_americanus
ENSAMXG00000020949	eif3c	98	76.965	ENSUMAG00000010927	-	99	76.923	Ursus_maritimus
ENSAMXG00000020949	eif3c	98	75.764	ENSVVUG00000025970	-	99	75.714	Vulpes_vulpes
ENSAMXG00000020949	eif3c	99	77.253	ENSXETG00000002941	eif3c	99	77.074	Xenopus_tropicalis
ENSAMXG00000020949	eif3c	100	85.638	ENSXMAG00000013796	eif3c	100	85.213	Xiphophorus_maculatus